RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	CDC12	P32468	407 aa	Known RBP	2.38	□□□□□ -2.03
RLM1	YPL089C	YAP1801	P38856	637 aa		2.38	□□□□□ -2.03
RLM1	YPL089C	SPF1	P39986	1215 aa	Known RBP	2.38	□□□□□ -2.03
RLM1	YPL089C	MND2	P40577	368 aa		2.38	□□□□□ -2.03
RLM1	YPL089C	VPS62	P53285	467 aa		2.38	□□□□□ -2.03
RLM1	YPL089C	SRT1	Q03175	343 aa		2.38	□□□□□ -2.03
RLM1	YPL089C	ACK1	Q07622	623 aa	Predicted RBP	2.38	□□□□□ -2.03
RLM1	YPL089C	OSW2	Q12202	724 aa		2.38	□□□□□ -2.03
RLM1	YPL089C	PPG1	P32838	368 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	ECM21	P38167	1117 aa	Known RBP	2.37	□□□□□ -2.03
RLM1	YPL089C	GIC1	P38785	314 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	SAH1	P39954	449 aa	Known RBP	2.37	□□□□□ -2.03
RLM1	YPL089C	OSW7	P43611	510 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
RLM1	YPL089C	GTF1	P53260	183 aa	Predicted RBP	2.37	□□□□□ -2.03
RLM1	YPL089C	SRP1	Q02821	542 aa	Known RBP	2.37	□□□□□ -2.03
RLM1	YPL089C	RPN4	Q03465	531 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	CDC53	Q12018	815 aa	Known RBP	2.37	□□□□□ -2.03
RLM1	YPL089C	PMI40	P29952	429 aa	Known RBP	2.37	□□□□□ -2.03
RLM1	YPL089C	STE5	P32917	917 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	MRP8	P35719	219 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	PBY1	P38254	753 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	NPP2	P39997	493 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	ZRG8	P40021	1076 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	IRR1	P40541	1150 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	BUD6	P41697	788 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	GCV2	P49095	1034 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	ADY3	Q07732	790 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	TPO1	Q07824	586 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	HMI1	Q12039	706 aa		2.37	□□□□□ -2.03
RLM1	YPL089C	EMC1	P25574	760 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	FUN30	P31380	1131 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	LST4	P34239	828 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	CHA4	P43634	648 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	MET12	P46151	657 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	GYP7	P48365	746 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	HUL5	P53119	910 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	DUS3	Q06053	668 aa	Known RBP	2.36	□□□□□ -2.03
RLM1	YPL089C	TDA5	Q06417	326 aa	Known RBP	2.36	□□□□□ -2.03
RLM1	YPL089C	CDA1	Q06702	301 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	YOR131C	Q12486	218 aa		2.36	□□□□□ -2.03
RLM1	YPL089C	YBR184W	P38299	523 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	CHS7	P38843	316 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	YGR012W	P53206	393 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	YAP6	Q03935	383 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	YLR224W	Q05947	369 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	NOP12	Q08208	459 aa	Known RBP	2.35	□□□□□ -2.03
RLM1	YPL089C	HIS5	P07172	385 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	HSF1	P10961	833 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	ENA1	P13587	1091 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	RAD4	P14736	754 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	STE11	P23561	717 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	RPC82	P32349	654 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	YKR078W	P36158	585 aa	Known RBP	2.35	□□□□□ -2.03
RLM1	YPL089C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.35	□□□□□ -2.03	not detected
RLM1	YPL089C	POA1	P38218	177 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	MNN10	P50108	393 aa	Known RBP	2.35	□□□□□ -2.03
RLM1	YPL089C	UBA2	P52488	636 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	ALG12	P53730	551 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	SFB2	P53953	876 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	ENA2	Q01896	1091 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	YDR306C	Q06640	478 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	ENA5	Q12691	1091 aa		2.35	□□□□□ -2.03
RLM1	YPL089C	ADE8	P04161	214 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	NPP1	P25353	742 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	AFR1	P33304	620 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	TSL1	P38427	1098 aa	Known RBP	2.34	□□□□□ -2.03
RLM1	YPL089C	PLB1	P39105	664 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	SIT1	P39980	628 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	PFD1	P46988	109 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	YKE2	P52553	114 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	NAN1	Q02931	896 aa	Known RBP	2.34	□□□□□ -2.03
RLM1	YPL089C	PPM2	Q08282	695 aa		2.34	□□□□□ -2.03
RLM1	YPL089C	RPP2A	P05319	106 aa	Known RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	SPE1	P08432	466 aa		2.34	□□□□□ -2.04
RLM1	YPL089C	AAR2	P32357	355 aa	Predicted RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	HBS1	P32769	611 aa	Known RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	SRP101	P32916	621 aa		2.34	□□□□□ -2.04
RLM1	YPL089C	RRP14	P36080	434 aa	Known RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	YBR238C	P38330	731 aa	Known RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	YER158C	P40095	573 aa		2.34	□□□□□ -2.04
RLM1	YPL089C	URM1	P40554	99 aa	Predicted RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	TIM54	P47045	478 aa		2.34	□□□□□ -2.04
RLM1	YPL089C	MCM6	P53091	1017 aa	Known RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	UTP8	P53276	713 aa	Known RBP	2.34	□□□□□ -2.04
RLM1	YPL089C	FMP25	Q08023	583 aa		2.34	□□□□□ -2.04
RLM1	YPL089C	PRP9	P19736	530 aa	Known RBP	2.33	□□□□□ -2.04
RLM1	YPL089C	CDC48	P25694	835 aa	Known RBP	2.33	□□□□□ -2.04
RLM1	YPL089C	RPL8B	P29453	256 aa	Known RBP	2.33	□□□□□ -2.04
RLM1	YPL089C	PPH3	P32345	308 aa		2.33	□□□□□ -2.04
RLM1	YPL089C	DCG1	P32460	244 aa		2.33	□□□□□ -2.04
RLM1	YPL089C	YHR020W	P38708	688 aa	Known RBP	2.33	□□□□□ -2.04
RLM1	YPL089C	NUP82	P40368	713 aa		2.33	□□□□□ -2.04
RLM1	YPL089C	BUL2	Q03758	920 aa	Known RBP	2.33	□□□□□ -2.04
RLM1	YPL089C	TMA10	Q06177	86 aa		2.33	□□□□□ -2.04
RLM1	YPL089C	MET6	P05694	767 aa	Known RBP	2.32	□□□□□ -2.04
RLM1	YPL089C	ATG19	P35193	415 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	CUE2	P36075	443 aa	Known RBP	2.32	□□□□□ -2.04
RLM1	YPL089C	YRO2	P38079	344 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	FPR3	P38911	411 aa	Known RBP	2.32	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms