RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C SIW14P53965 281 aa5.65□□□□□ -1.5
SNF8YPL002C HXT15P54854 567 aa5.65□□□□□ -1.5
SNF8YPL002C ADE6P38972 1358 aaKnown RBP5.65□□□□□ -1.51
SNF8YPL002C CYC1P00044 109 aaPredicted RBP5.64□□□□□ -1.51
SNF8YPL002C MCM2P29469 868 aa5.64□□□□□ -1.51
SNF8YPL002C RPN3P40016 523 aaKnown RBP5.64□□□□□ -1.51
SNF8YPL002C SEC26P41810 973 aaKnown RBP5.64□□□□□ -1.51
SNF8YPL002C ENV11P53246 860 aa5.64□□□□□ -1.51
SNF8YPL002C CLU1Q03690 1277 aaKnown RBP5.64□□□□□ -1.51
SNF8YPL002C SGD1Q06132 899 aa5.64□□□□□ -1.51
SNF8YPL002C RSB1Q08417 382 aa5.64□□□□□ -1.51
SNF8YPL002C YPL260WQ08977 551 aa5.64□□□□□ -1.51
SNF8YPL002C PRE10P21242 288 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SNF8YPL002C LAM1P38851 1228 aa5.63□□□□□ -1.51
SNF8YPL002C CHZ1P40019 153 aaPredicted RBP5.63□□□□□ -1.51
SNF8YPL002C YRF1-4O13559 1382 aa5.63□□□□□ -1.51
SNF8YPL002C LEU2P04173 364 aaPredicted RBP5.62□□□□□ -1.51
SNF8YPL002C SEC8P32855 1065 aa5.62□□□□□ -1.51
SNF8YPL002C MEF2P39677 819 aa5.62□□□□□ -1.51
SNF8YPL002C EAF6P47128 113 aa5.62□□□□□ -1.51
SNF8YPL002C MRL1Q06815 381 aa5.62□□□□□ -1.51
SNF8YPL002C GCR1P07261 785 aa5.61□□□□□ -1.51
SNF8YPL002C YER152CP10356 443 aa5.61□□□□□ -1.51
SNF8YPL002C ATE1P16639 503 aa5.61□□□□□ -1.51
SNF8YPL002C SPT20P50875 604 aa5.61□□□□□ -1.51
SNF8YPL002C GCN5Q03330 439 aa5.61□□□□□ -1.51
SNF8YPL002C PLB2Q03674 706 aa5.61□□□□□ -1.51
SNF8YPL002C ROT1Q03691 256 aa5.61□□□□□ -1.51
SNF8YPL002C YOR352WQ08816 343 aa5.61□□□□□ -1.51
SNF8YPL002C YLR358CO13565 187 aa5.6□□□□□ -1.51
SNF8YPL002C RPS24AP0CX31 135 aaKnown RBP5.6□□□□□ -1.51
SNF8YPL002C RPS24BP0CX32 135 aaKnown RBP5.6□□□□□ -1.51
SNF8YPL002C PUF4P25339 888 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SNF8YPL002C CTS1P29029 562 aa5.6□□□□□ -1.51
SNF8YPL002C POL32P47110 350 aa5.6□□□□□ -1.51
SNF8YPL002C ENT3P47160 408 aa5.6□□□□□ -1.51
SNF8YPL002C SPR28Q04921 423 aa5.6□□□□□ -1.51
SNF8YPL002C BUG1Q12191 341 aa5.6□□□□□ -1.51
SNF8YPL002C CTT1P06115 562 aa5.59□□□□□ -1.51
SNF8YPL002C SRM1P21827 482 aa5.59□□□□□ -1.51
SNF8YPL002C SYP1P25623 870 aaKnown RBP5.59□□□□□ -1.51
SNF8YPL002C MLS1P30952 554 aa5.59□□□□□ -1.51
SNF8YPL002C SLD2P34252 453 aa5.59□□□□□ -1.51
SNF8YPL002C SHM2P37291 469 aaKnown RBP5.59□□□□□ -1.51
SNF8YPL002C RGD1P38339 666 aa5.59□□□□□ -1.51
SNF8YPL002C RRT14P40470 206 aa5.59□□□□□ -1.51
SNF8YPL002C FYV10P40492 516 aa5.59□□□□□ -1.51
SNF8YPL002C HNT2P49775 206 aa5.59□□□□□ -1.51
SNF8YPL002C SQS1P53866 767 aaKnown RBP5.59□□□□□ -1.51
SNF8YPL002C RIB2Q12362 591 aaKnown RBP5.59□□□□□ -1.51
SNF8YPL002C CNN1P43618 361 aa5.58□□□□□ -1.52
SNF8YPL002C YJR107WP47145 328 aa5.58□□□□□ -1.52
SNF8YPL002C DUS4Q06063 367 aa5.58□□□□□ -1.52
SNF8YPL002C GAL10P04397 699 aa5.57□□□□□ -1.52
SNF8YPL002C DBP5P20449 482 aaKnown RBP5.57□□□□□ -1.52
SNF8YPL002C SPE2P21182 396 aa5.57□□□□□ -1.52
SNF8YPL002C MGE1P38523 228 aa5.57□□□□□ -1.52
SNF8YPL002C RRP15Q06511 250 aaPredicted RBP5.57□□□□□ -1.52
SNF8YPL002C CMP2P14747 604 aa5.56□□□□□ -1.52
SNF8YPL002C RFC5P38251 354 aa5.56□□□□□ -1.52
SNF8YPL002C TAT2P38967 592 aa5.56□□□□□ -1.52
SNF8YPL002C MPH1P40562 993 aa5.56□□□□□ -1.52
SNF8YPL002C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SNF8YPL002C RSM24Q03976 319 aa5.56□□□□□ -1.52
SNF8YPL002C ATG13Q06628 738 aa5.56□□□□□ -1.52
SNF8YPL002C MPT5P39016 859 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SNF8YPL002C SVS1Q12254 260 aa5.54□□□□□ -1.52
SNF8YPL002C SNF2P22082 1703 aa5.54□□□□□ -1.52
SNF8YPL002C APC1P53886 1748 aa5.54□□□□□ -1.52
SNF8YPL002C SCT1P32784 759 aa5.53□□□□□ -1.52
SNF8YPL002C RER2P35196 286 aa5.53□□□□□ -1.52
SNF8YPL002C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
SNF8YPL002C CDC6P09119 513 aa5.52□□□□□ -1.53
SNF8YPL002C RAD4P14736 754 aa5.52□□□□□ -1.53
SNF8YPL002C BAS1P22035 811 aa5.52□□□□□ -1.53
SNF8YPL002C DOM34P33309 386 aa5.52□□□□□ -1.53
SNF8YPL002C MXR1P40029 184 aa5.52□□□□□ -1.53
SNF8YPL002C TIF35Q04067 274 aaKnown RBP5.52□□□□□ -1.53
SNF8YPL002C GRX1P25373 110 aaKnown RBP5.51□□□□□ -1.53
SNF8YPL002C CDC20P26309 610 aa5.51□□□□□ -1.53
SNF8YPL002C ADE16P54113 591 aaKnown RBP5.51□□□□□ -1.53
SNF8YPL002C YML020WQ03722 664 aa5.51□□□□□ -1.53
SNF8YPL002C GSF2Q04697 403 aaKnown RBP5.51□□□□□ -1.53
SNF8YPL002C MHP1P43638 1398 aa5.51□□□□□ -1.53
SNF8YPL002C YLR419WQ06698 1435 aaKnown RBP5.5□□□□□ -1.53
SNF8YPL002C TUB2P02557 457 aaKnown RBP5.5□□□□□ -1.53
SNF8YPL002C KIN2P13186 1147 aaKnown RBP5.5□□□□□ -1.53
SNF8YPL002C APL1P27351 700 aa5.5□□□□□ -1.53
SNF8YPL002C MCM7P38132 845 aa5.5□□□□□ -1.53
SNF8YPL002C ESF1Q06344 628 aaKnown RBP5.5□□□□□ -1.53
SNF8YPL002C ACK1Q07622 623 aaPredicted RBP5.5□□□□□ -1.53
SNF8YPL002C GPB1Q08886 897 aa5.5□□□□□ -1.53
SNF8YPL002C RTT10Q08924 1013 aa5.5□□□□□ -1.53
SNF8YPL002C RPO41P13433 1351 aaKnown RBP5.5□□□□□ -1.53
SNF8YPL002C RIM15P43565 1770 aa5.5□□□□□ -1.53
SNF8YPL002C DBP2P24783 546 aaKnown RBP5.49□□□□□ -1.53
SNF8YPL002C PEP7P32609 515 aa5.49□□□□□ -1.53
SNF8YPL002C LST4P34239 828 aa5.49□□□□□ -1.53
SNF8YPL002C ERT1P38140 529 aa5.49□□□□□ -1.53
SNF8YPL002C KIN4Q01919 800 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms