RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	RNQ1	P25367	405 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	GRX1	P25373	110 aa	Known RBP	4.68	□□□□□ -1.66
RPA43	YOR340C	PRO1	P32264	428 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	MDL2	P33311	773 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	LRG1	P35688	1017 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	YKL069W	P36088	180 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	CCZ1	P38273	704 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	TAT2	P38967	592 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	RPN3	P40016	523 aa	Known RBP	4.68	□□□□□ -1.66
RPA43	YOR340C	YGL176C	P46945	554 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	ECL1	P48235	211 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	RNH70	P53331	553 aa		4.68	□□□□□ -1.66
RPA43	YOR340C	HOS3	Q02959	697 aa	Known RBP	4.68	□□□□□ -1.66
RPA43	YOR340C	SPP382	Q06411	708 aa	Predicted RBP	4.68	□□□□□ -1.66
RPA43	YOR340C	CIT2	P08679	460 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	RAD4	P14736	754 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	AGP1	P25376	633 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	SBA1	P28707	216 aa	Known RBP	4.67	□□□□□ -1.66
RPA43	YOR340C	SEG2	P34250	1132 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	SPC42	P36094	363 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	PTC7	P38797	343 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	PEX7	P39108	375 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	SPF1	P39986	1215 aa	Known RBP	4.67	□□□□□ -1.66
RPA43	YOR340C	GTS1	P40956	396 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	DOS2	P54858	310 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
RPA43	YOR340C	NAN1	Q02931	896 aa	Known RBP	4.67	□□□□□ -1.66
RPA43	YOR340C	NBA1	Q08229	501 aa	Known RBP	4.67	□□□□□ -1.66
RPA43	YOR340C	YPL066W	Q12194	479 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	BCK1	Q01389	1478 aa		4.67	□□□□□ -1.66
RPA43	YOR340C	RAV1	P47104	1357 aa		4.66	□□□□□ -1.66
RPA43	YOR340C	CFT1	Q06632	1357 aa	Known RBP	4.66	□□□□□ -1.66
RPA43	YOR340C	SAM35	P14693	329 aa		4.66	□□□□□ -1.66
RPA43	YOR340C	ADP1	P25371	1049 aa		4.66	□□□□□ -1.66
RPA43	YOR340C	SRO9	P25567	434 aa	Known RBP	4.66	□□□□□ -1.66
RPA43	YOR340C	PPG1	P32838	368 aa		4.66	□□□□□ -1.66
RPA43	YOR340C	POL12	P38121	705 aa	Predicted RBP	4.66	□□□□□ -1.66
RPA43	YOR340C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
RPA43	YOR340C	RPN4	Q03465	531 aa		4.66	□□□□□ -1.66
RPA43	YOR340C	SSY1	Q03770	852 aa		4.66	□□□□□ -1.66
RPA43	YOR340C	YOR131C	Q12486	218 aa		4.66	□□□□□ -1.66
RPA43	YOR340C	AIM26	P32858	118 aa		4.65	□□□□□ -1.67
RPA43	YOR340C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
RPA43	YOR340C	OSW7	P43611	510 aa		4.65	□□□□□ -1.67
RPA43	YOR340C	HUL5	P53119	910 aa		4.65	□□□□□ -1.67
RPA43	YOR340C	IOC4	Q04213	475 aa		4.65	□□□□□ -1.67
RPA43	YOR340C	RSB1	Q08417	382 aa		4.65	□□□□□ -1.67
RPA43	YOR340C	YCR015C	P25616	317 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	HSP78	P33416	811 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	MRP8	P35719	219 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	VBA5	P36172	582 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	PIK1	P39104	1066 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	TIM54	P47045	478 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	SHE9	Q04172	456 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	RCL1	Q08096	367 aa	Predicted RBP	4.64	□□□□□ -1.67
RPA43	YOR340C	DFG16	Q99234	619 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	RAD9	P14737	1309 aa		4.64	□□□□□ -1.67
RPA43	YOR340C	RPL11A	P0C0W9	174 aa	Known RBP	4.63	□□□□□ -1.67
RPA43	YOR340C	SNF5	P18480	905 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	BAP2	P38084	609 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	BUD6	P41697	788 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	YFL054C	P43549	646 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	ALG12	P53730	551 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	RIA1	P53893	1110 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	RSC58	Q07979	502 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	ACM1	Q08981	209 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	RPL11B	Q3E757	174 aa	Predicted RBP	4.63	□□□□□ -1.67
RPA43	YOR340C	RTC1	Q08281	1341 aa		4.63	□□□□□ -1.67
RPA43	YOR340C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.62	□□□□□ -1.67
RPA43	YOR340C	SPS1	P08458	490 aa		4.62	□□□□□ -1.67
RPA43	YOR340C	RRP14	P36080	434 aa	Known RBP	4.62	□□□□□ -1.67
RPA43	YOR340C	PNT1	P38969	423 aa		4.62	□□□□□ -1.67
RPA43	YOR340C	MBP1	P39678	833 aa		4.62	□□□□□ -1.67
RPA43	YOR340C	MXR1	P40029	184 aa		4.62	□□□□□ -1.67
RPA43	YOR340C	SIP5	P40210	489 aa	Known RBP	4.62	□□□□□ -1.67
RPA43	YOR340C	FOL2	P51601	243 aa	Known RBP	4.62	□□□□□ -1.67
RPA43	YOR340C	PRP43	P53131	767 aa	Known RBP	4.62	□□□□□ -1.67
RPA43	YOR340C	YNR029C	P53729	429 aa	Known RBP	4.62	□□□□□ -1.67
RPA43	YOR340C	LPX1	Q12405	387 aa	Known RBP	4.62	□□□□□ -1.67
RPA43	YOR340C	TY4B-H	P0C2J7	1802 aa		4.61	□□□□□ -1.67
RPA43	YOR340C	TY4B-J	P47024	1803 aa		4.61	□□□□□ -1.67
RPA43	YOR340C	UGA2	P38067	497 aa		4.61	□□□□□ -1.67
RPA43	YOR340C	IRR1	P40541	1150 aa		4.61	□□□□□ -1.67
RPA43	YOR340C	PPM2	Q08282	695 aa		4.61	□□□□□ -1.67
RPA43	YOR340C	THS1	P04801	734 aa	Known RBP	4.6	□□□□□ -1.67
RPA43	YOR340C	DBP2	P24783	546 aa	Known RBP	4.6	□□□□□ -1.67
RPA43	YOR340C	TSA1	P34760	196 aa	Known RBP	4.6	□□□□□ -1.67
RPA43	YOR340C	PBY1	P38254	753 aa		4.6	□□□□□ -1.67
RPA43	YOR340C	YBR184W	P38299	523 aa		4.6	□□□□□ -1.67
RPA43	YOR340C	GEM1	P39722	662 aa		4.6	□□□□□ -1.67
RPA43	YOR340C	ORC3	P54790	616 aa		4.6	□□□□□ -1.67
RPA43	YOR340C	PRP9	P19736	530 aa	Known RBP	4.59	□□□□□ -1.67
RPA43	YOR340C	TIM23	P32897	222 aa		4.59	□□□□□ -1.67
RPA43	YOR340C	STE5	P32917	917 aa		4.59	□□□□□ -1.67
RPA43	YOR340C	SLA2	P33338	968 aa		4.59	□□□□□ -1.67
RPA43	YOR340C	PAF1	P38351	445 aa		4.59	□□□□□ -1.67
RPA43	YOR340C	YHR020W	P38708	688 aa	Known RBP	4.59	□□□□□ -1.67
RPA43	YOR340C	NUP82	P40368	713 aa		4.59	□□□□□ -1.67
RPA43	YOR340C	RRP5	Q05022	1729 aa	Known RBP	4.59	□□□□□ -1.67
RPA43	YOR340C	CDA2	Q06703	312 aa		4.59	□□□□□ -1.67

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