RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF2YOR290C TYS1P36421 394 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C YSW1P38280 609 aa4.31□□□□□ -1.72
SNF2YOR290C CCT3P39077 534 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C HXT13P39924 564 aa4.31□□□□□ -1.72
SNF2YOR290C MNN11P46985 422 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C UTP4Q06679 776 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C YCG1Q06680 1035 aa4.31□□□□□ -1.72
SNF2YOR290C CSR1Q06705 408 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C MET7Q08645 548 aa4.31□□□□□ -1.72
SNF2YOR290C ATP16Q12165 160 aa4.31□□□□□ -1.72
SNF2YOR290C OSW2Q12202 724 aa4.31□□□□□ -1.72
SNF2YOR290C FKS3Q04952 1785 aa4.31□□□□□ -1.72
SNF2YOR290C RVS161P25343 265 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C SER1P33330 395 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C TFC4P33339 1025 aa4.31□□□□□ -1.72
SNF2YOR290C PAN5P38787 379 aa4.31□□□□□ -1.72
SNF2YOR290C RVS167P39743 482 aaKnown RBP4.31□□□□□ -1.72
SNF2YOR290C NDE1P40215 560 aa4.31□□□□□ -1.72
SNF2YOR290C KAP120Q02932 1032 aa4.31□□□□□ -1.72
SNF2YOR290C MMT1Q03218 510 aa4.31□□□□□ -1.72
SNF2YOR290C MTC5Q03897 1148 aa4.31□□□□□ -1.72
SNF2YOR290C GYL1Q04322 720 aa4.31□□□□□ -1.72
SNF2YOR290C AIM32Q04689 311 aa4.31□□□□□ -1.72
SNF2YOR290C RGA2Q06407 1009 aa4.31□□□□□ -1.72
SNF2YOR290C LDB17Q12342 491 aa4.31□□□□□ -1.72
SNF2YOR290C PLC1P32383 869 aa4.3□□□□□ -1.72
SNF2YOR290C HES1P35843 434 aa4.3□□□□□ -1.72
SNF2YOR290C SLX1P38324 304 aa4.3□□□□□ -1.72
SNF2YOR290C TDA11P38854 504 aa4.3□□□□□ -1.72
SNF2YOR290C SEC9P40357 651 aa4.3□□□□□ -1.72
SNF2YOR290C CSM2P40465 213 aa4.3□□□□□ -1.72
SNF2YOR290C SAP155P43612 1002 aa4.3□□□□□ -1.72
SNF2YOR290C NOC4Q06512 552 aaPredicted RBP4.3□□□□□ -1.72
SNF2YOR290C TCB1Q12466 1186 aa4.3□□□□□ -1.72
SNF2YOR290C PRE10P21242 288 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SNF2YOR290C CHS3P29465 1165 aa4.3□□□□□ -1.72
SNF2YOR290C GLG1P36143 616 aa4.3□□□□□ -1.72
SNF2YOR290C KHA1P40309 873 aa4.3□□□□□ -1.72
SNF2YOR290C NUP85P46673 744 aa4.3□□□□□ -1.72
SNF2YOR290C GYP7P48365 746 aa4.3□□□□□ -1.72
SNF2YOR290C KIP3P53086 805 aaKnown RBP4.3□□□□□ -1.72
SNF2YOR290C NSA1P53136 463 aaPredicted RBP4.3□□□□□ -1.72
SNF2YOR290C RRN9P53437 365 aa4.3□□□□□ -1.72
SNF2YOR290C SSL2Q00578 843 aa4.3□□□□□ -1.72
SNF2YOR290C TAO3P40468 2376 aa4.3□□□□□ -1.72
SNF2YOR290C CFT1Q06632 1357 aaKnown RBP4.3□□□□□ -1.72
SNF2YOR290C APC1P53886 1748 aa4.3□□□□□ -1.72
SNF2YOR290C MIS1P09440 975 aaKnown RBP4.3□□□□□ -1.72
SNF2YOR290C SEC15P22224 910 aa4.3□□□□□ -1.72
SNF2YOR290C KRR1P25586 316 aaPredicted RBP4.3□□□□□ -1.72
SNF2YOR290C STB4P50104 949 aa4.3□□□□□ -1.72
SNF2YOR290C STE20Q03497 939 aaKnown RBP4.3□□□□□ -1.72
SNF2YOR290C AOS1Q06624 347 aa4.3□□□□□ -1.72
SNF2YOR290C SHS1Q07657 551 aa4.3□□□□□ -1.72
SNF2YOR290C LOT6Q07923 191 aa4.3□□□□□ -1.72
SNF2YOR290C SGT1Q08446 395 aa4.3□□□□□ -1.72
SNF2YOR290C YCT1Q12235 531 aa4.3□□□□□ -1.72
SNF2YOR290C COQ4O13525 335 aa4.3□□□□□ -1.72
SNF2YOR290C CBS2P14905 389 aa4.3□□□□□ -1.72
SNF2YOR290C MET4P32389 672 aa4.3□□□□□ -1.72
SNF2YOR290C NFU1P32860 256 aa4.3□□□□□ -1.72
SNF2YOR290C NIC96P34077 839 aa4.3□□□□□ -1.72
SNF2YOR290C MBP1P39678 833 aa4.3□□□□□ -1.72
SNF2YOR290C ERP2P39704 215 aa4.3□□□□□ -1.72
SNF2YOR290C CCT7P42943 550 aaKnown RBP4.3□□□□□ -1.72
SNF2YOR290C LIF1P53150 421 aa4.3□□□□□ -1.72
SNF2YOR290C CSL4P53859 292 aaPredicted RBP4.3□□□□□ -1.72
SNF2YOR290C TBF1Q02457 562 aa4.3□□□□□ -1.72
SNF2YOR290C YLR125WQ12138 136 aa4.3□□□□□ -1.72
SNF2YOR290C RGP1P16664 663 aa4.29□□□□□ -1.72
SNF2YOR290C ECM25P32525 599 aa4.29□□□□□ -1.72
SNF2YOR290C PRS1P32895 427 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C GIP1P38229 639 aa4.29□□□□□ -1.72
SNF2YOR290C SBE2P42223 864 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C POL32P47110 350 aa4.29□□□□□ -1.72
SNF2YOR290C YLL058WQ12198 575 aa4.29□□□□□ -1.72
SNF2YOR290C RTC1Q08281 1341 aa4.29□□□□□ -1.72
SNF2YOR290C CMD1P06787 147 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C RPB4P20433 221 aaPredicted RBP4.29□□□□□ -1.72
SNF2YOR290C MCD4P36051 919 aa4.29□□□□□ -1.72
SNF2YOR290C SIC1P38634 284 aa4.29□□□□□ -1.72
SNF2YOR290C VPS8P39702 1274 aa4.29□□□□□ -1.72
SNF2YOR290C MET18P40469 1032 aa4.29□□□□□ -1.72
SNF2YOR290C YRB1P41920 201 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C LAT1P12695 482 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C RSR1P13856 272 aa4.29□□□□□ -1.72
SNF2YOR290C MRF1P30775 413 aaPredicted RBP4.29□□□□□ -1.72
SNF2YOR290C SWE1P32944 819 aa4.29□□□□□ -1.72
SNF2YOR290C HEK2P38199 381 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72 RIP-Chip
SNF2YOR290C ATG7P38862 630 aa4.29□□□□□ -1.72
SNF2YOR290C SPO22P40511 975 aa4.29□□□□□ -1.72
SNF2YOR290C SER2P42941 309 aa4.29□□□□□ -1.72
SNF2YOR290C PRP43P53131 767 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C SIW14P53965 281 aa4.29□□□□□ -1.72
SNF2YOR290C HFD1Q04458 532 aa4.29□□□□□ -1.72
SNF2YOR290C RPL35AP0CX84 120 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C RPL35BP0CX85 120 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C PRI1P10363 409 aa4.29□□□□□ -1.72
SNF2YOR290C PDI1P17967 522 aaKnown RBP4.29□□□□□ -1.72
SNF2YOR290C YCR051WP25631 222 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms