RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C SQT1P35184 431 aa8□□□□□ -1.13
RUP1YOR138C SUL1P38359 859 aa8□□□□□ -1.13
RUP1YOR138C UBP9P39967 754 aa8□□□□□ -1.13
RUP1YOR138C YJR039WP47107 1121 aa8□□□□□ -1.13
RUP1YOR138C LSB1P53281 241 aa8□□□□□ -1.13
RUP1YOR138C CPR6P53691 371 aaKnown RBP8□□□□□ -1.13
RUP1YOR138C MFM1Q02783 413 aa8□□□□□ -1.13
RUP1YOR138C HOT1Q03213 719 aa8□□□□□ -1.13
RUP1YOR138C PNP1Q05788 311 aa8□□□□□ -1.13
RUP1YOR138C TCO89Q08921 799 aa8□□□□□ -1.13
RUP1YOR138C MED1Q12321 566 aa8□□□□□ -1.13
RUP1YOR138C PMR1P13586 950 aa7.99□□□□□ -1.13
RUP1YOR138C SRO9P25567 434 aaKnown RBP7.99□□□□□ -1.13
RUP1YOR138C MRF1P30775 413 aaPredicted RBP7.99□□□□□ -1.13
RUP1YOR138C YKL050CP35736 922 aa7.99□□□□□ -1.13
RUP1YOR138C PFF1P38244 976 aa7.99□□□□□ -1.13
RUP1YOR138C KAP123P40069 1113 aaKnown RBP7.99□□□□□ -1.13
RUP1YOR138C ULP2P40537 1034 aaPredicted RBP7.99□□□□□ -1.13
RUP1YOR138C ADA2Q02336 434 aa7.99□□□□□ -1.13
RUP1YOR138C PIG1Q06216 648 aa7.99□□□□□ -1.13
RUP1YOR138C YDL124WQ07551 312 aaKnown RBP7.99□□□□□ -1.13
RUP1YOR138C TRP2P00899 507 aaKnown RBP7.98□□□□□ -1.13
RUP1YOR138C SWI6P09959 803 aa7.98□□□□□ -1.13
RUP1YOR138C YKU70P32807 602 aa7.98□□□□□ -1.13
RUP1YOR138C NDT80P38830 627 aa7.98□□□□□ -1.13
RUP1YOR138C ROG3P43602 733 aa7.98□□□□□ -1.13
RUP1YOR138C USA1Q03714 838 aa7.98□□□□□ -1.13
RUP1YOR138C SPO21Q12411 609 aa7.98□□□□□ -1.13
RUP1YOR138C PYC1P11154 1178 aaKnown RBP7.98□□□□□ -1.13
RUP1YOR138C CDC10P25342 322 aaKnown RBP7.98□□□□□ -1.13
RUP1YOR138C SEC20P28791 383 aa7.98□□□□□ -1.13
RUP1YOR138C LOS1P33418 1100 aaPredicted RBP7.98□□□□□ -1.13
RUP1YOR138C URB2P47108 1174 aa7.98□□□□□ -1.13
RUP1YOR138C BRO1P48582 844 aa7.98□□□□□ -1.13
RUP1YOR138C ERO1Q03103 563 aa7.98□□□□□ -1.13
RUP1YOR138C YMR018WQ04364 514 aa7.98□□□□□ -1.13
RUP1YOR138C YLR297WQ05899 129 aa7.98□□□□□ -1.13
RUP1YOR138C SKG3Q06315 1026 aa7.98□□□□□ -1.13
RUP1YOR138C UTP4Q06679 776 aaKnown RBP7.98□□□□□ -1.13
RUP1YOR138C PUS1Q12211 544 aaKnown RBP7.98□□□□□ -1.13
RUP1YOR138C SEY1Q99287 776 aa7.98□□□□□ -1.13
RUP1YOR138C ARD1P07347 238 aaPredicted RBP7.97□□□□□ -1.13
RUP1YOR138C POL3P15436 1097 aa7.97□□□□□ -1.13
RUP1YOR138C KAR3P17119 729 aa7.97□□□□□ -1.13
RUP1YOR138C NAM7P30771 971 aaKnown RBP7.97□□□□□ -1.13
RUP1YOR138C PDB1P32473 366 aaKnown RBP7.97□□□□□ -1.13
RUP1YOR138C YKR018CP36114 725 aa7.97□□□□□ -1.13
RUP1YOR138C ECM2P38241 364 aaKnown RBP7.97□□□□□ -1.13
RUP1YOR138C RCK2P38623 610 aa7.97□□□□□ -1.13
RUP1YOR138C NUP82P40368 713 aa7.97□□□□□ -1.13
RUP1YOR138C SAP185P40856 1058 aa7.97□□□□□ -1.13
RUP1YOR138C HXT8P40886 569 aa7.97□□□□□ -1.13
RUP1YOR138C NMD5P46970 1048 aa7.97□□□□□ -1.13
RUP1YOR138C RIM8P53179 542 aa7.97□□□□□ -1.13
RUP1YOR138C YML082WQ04533 649 aaKnown RBP7.97□□□□□ -1.13
RUP1YOR138C YPL277CQ08989 487 aa7.97□□□□□ -1.13
RUP1YOR138C FAL1Q12099 399 aaKnown RBP7.97□□□□□ -1.13
RUP1YOR138C ILV6P25605 309 aaKnown RBP7.96□□□□□ -1.13
RUP1YOR138C LCP5P40079 357 aaPredicted RBP7.96□□□□□ -1.13
RUP1YOR138C SMX2P40204 77 aaKnown RBP7.96□□□□□ -1.13
RUP1YOR138C SEC5P89102 971 aa7.96□□□□□ -1.13
RUP1YOR138C UTP6Q02354 440 aaKnown RBP7.96□□□□□ -1.13
RUP1YOR138C ACK1Q07622 623 aaPredicted RBP7.96□□□□□ -1.13
RUP1YOR138C YLR462WO13556 202 aa7.96□□□□□ -1.14
RUP1YOR138C SPT2P06843 333 aaPredicted RBP7.96□□□□□ -1.14
RUP1YOR138C YEL1P34225 687 aa7.96□□□□□ -1.14
RUP1YOR138C BLI1P35727 113 aa7.96□□□□□ -1.14
RUP1YOR138C PBP2P38151 413 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
RUP1YOR138C TIF5P38431 405 aaKnown RBP7.96□□□□□ -1.14
RUP1YOR138C YHL049CP38722 271 aa7.96□□□□□ -1.14
RUP1YOR138C PES4P39684 611 aa7.96□□□□□ -1.14
RUP1YOR138C YEL075CP39972 122 aa7.96□□□□□ -1.14
RUP1YOR138C YER189WP40104 122 aa7.96□□□□□ -1.14
RUP1YOR138C YFL064CP43540 174 aa7.96□□□□□ -1.14
RUP1YOR138C PRP3Q03338 469 aaPredicted RBP7.96□□□□□ -1.14
RUP1YOR138C YMR074CQ04773 145 aa7.96□□□□□ -1.14
RUP1YOR138C TAF9Q05027 157 aa7.96□□□□□ -1.14
RUP1YOR138C FRA1Q07825 749 aa7.96□□□□□ -1.14
RUP1YOR138C PCL8Q08966 492 aa7.96□□□□□ -1.14
RUP1YOR138C YBL111CQ3E7Y5 667 aa7.96□□□□□ -1.14
RUP1YOR138C GAL11P19659 1081 aa7.95□□□□□ -1.14
RUP1YOR138C PRP4P20053 465 aaKnown RBP7.95□□□□□ -1.14
RUP1YOR138C YBR062CP38239 180 aa7.95□□□□□ -1.14
RUP1YOR138C HIS2P38635 335 aa7.95□□□□□ -1.14
RUP1YOR138C PAN5P38787 379 aa7.95□□□□□ -1.14
RUP1YOR138C COS5P47187 383 aa7.95□□□□□ -1.14
RUP1YOR138C DIP5P53388 608 aa7.95□□□□□ -1.14
RUP1YOR138C EEB1Q02891 456 aa7.95□□□□□ -1.14
RUP1YOR138C ACM1Q08981 209 aa7.95□□□□□ -1.14
RUP1YOR138C LAP2Q10740 671 aa7.95□□□□□ -1.14
RUP1YOR138C RPB2P08518 1224 aaKnown RBP7.95□□□□□ -1.14
RUP1YOR138C BUD31P25337 157 aaPredicted RBP7.95□□□□□ -1.14
RUP1YOR138C GCD6P32501 712 aaKnown RBP7.95□□□□□ -1.14
RUP1YOR138C YBL028CP38202 106 aa7.95□□□□□ -1.14
RUP1YOR138C RRT2P38332 387 aa7.95□□□□□ -1.14
RUP1YOR138C SAK1P38990 1142 aa7.95□□□□□ -1.14
RUP1YOR138C PSY2P40164 858 aa7.95□□□□□ -1.14
RUP1YOR138C SDS3P40505 327 aa7.95□□□□□ -1.14
RUP1YOR138C INA22P40576 216 aa7.95□□□□□ -1.14
RUP1YOR138C BRE2P43132 505 aa7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms