RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W OMS1Q06668 471 aa3.95□□□□□ -1.78
PEP12YOR036W TRP2P00899 507 aaKnown RBP3.94□□□□□ -1.78
PEP12YOR036W HSF1P10961 833 aa3.94□□□□□ -1.78
PEP12YOR036W CAD1P24813 409 aaKnown RBP3.94□□□□□ -1.78
PEP12YOR036W NPP2P39997 493 aa3.94□□□□□ -1.78
PEP12YOR036W FYV10P40492 516 aa3.94□□□□□ -1.78
PEP12YOR036W PSP2P50109 593 aaKnown RBP3.94□□□□□ -1.78
PEP12YOR036W SRT1Q03175 343 aa3.94□□□□□ -1.78
PEP12YOR036W GUP2Q08929 609 aa3.94□□□□□ -1.78
PEP12YOR036W TRM13Q12383 476 aa3.94□□□□□ -1.78
PEP12YOR036W INO1P11986 533 aa3.93□□□□□ -1.78
PEP12YOR036W LYP1P32487 611 aa3.93□□□□□ -1.78
PEP12YOR036W MTH1P35198 433 aa3.93□□□□□ -1.78
PEP12YOR036W PAM1P37304 830 aaKnown RBP3.93□□□□□ -1.78
PEP12YOR036W NOP7P53261 605 aaKnown RBP3.93□□□□□ -1.78
PEP12YOR036W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
PEP12YOR036W RRP15Q06511 250 aaPredicted RBP3.93□□□□□ -1.78
PEP12YOR036W ACF2Q12168 779 aa3.93□□□□□ -1.78
PEP12YOR036W YLL058WQ12198 575 aa3.93□□□□□ -1.78
PEP12YOR036W TRP4P07285 380 aaPredicted RBP3.92□□□□□ -1.78
PEP12YOR036W FUN30P31380 1131 aa3.92□□□□□ -1.78
PEP12YOR036W DUT1P33317 147 aa3.92□□□□□ -1.78
PEP12YOR036W EEB1Q02891 456 aa3.92□□□□□ -1.78
PEP12YOR036W UPC2Q12151 913 aa3.92□□□□□ -1.78
PEP12YOR036W ATE1P16639 503 aa3.91□□□□□ -1.78
PEP12YOR036W ATG19P35193 415 aa3.91□□□□□ -1.78
PEP12YOR036W YGL176CP46945 554 aa3.91□□□□□ -1.78
PEP12YOR036W GND2P53319 492 aa3.91□□□□□ -1.78
PEP12YOR036W ORC1P54784 914 aaPredicted RBP3.91□□□□□ -1.78
PEP12YOR036W TMA46Q12000 345 aaKnown RBP3.91□□□□□ -1.78
PEP12YOR036W YJR107WP47145 328 aa3.9□□□□□ -1.79
PEP12YOR036W RNT1Q02555 471 aa3.9□□□□□ -1.79
PEP12YOR036W SLU7Q02775 382 aaKnown RBP3.9□□□□□ -1.79
PEP12YOR036W ESF1Q06344 628 aaKnown RBP3.9□□□□□ -1.79
PEP12YOR036W RKM4Q12504 494 aa3.9□□□□□ -1.79
PEP12YOR036W STE14P32584 239 aa3.89□□□□□ -1.79
PEP12YOR036W SPC42P36094 363 aa3.89□□□□□ -1.79
PEP12YOR036W MGE1P38523 228 aa3.89□□□□□ -1.79
PEP12YOR036W POL32P47110 350 aa3.89□□□□□ -1.79
PEP12YOR036W TYW3P53177 273 aa3.89□□□□□ -1.79
PEP12YOR036W SFB2P53953 876 aa3.89□□□□□ -1.79
PEP12YOR036W TIM44Q01852 431 aa3.89□□□□□ -1.79
PEP12YOR036W PPR1P07272 904 aaPredicted RBP3.88□□□□□ -1.79
PEP12YOR036W ALG7P07286 448 aa3.88□□□□□ -1.79
PEP12YOR036W YKL107WP34251 309 aa3.88□□□□□ -1.79
PEP12YOR036W ERG5P54781 538 aa3.88□□□□□ -1.79
PEP12YOR036W MET10P39692 1035 aa3.86□□□□□ -1.79
PEP12YOR036W SAH1P39954 449 aaKnown RBP3.86□□□□□ -1.79
PEP12YOR036W YLR225CQ05948 407 aaKnown RBP3.86□□□□□ -1.79
PEP12YOR036W NDJ1Q12366 352 aa3.86□□□□□ -1.79
PEP12YOR036W PEX2P32800 271 aa3.85□□□□□ -1.79
PEP12YOR036W YER158CP40095 573 aa3.85□□□□□ -1.79
PEP12YOR036W SDS3P40505 327 aa3.85□□□□□ -1.79
PEP12YOR036W ESC2Q06340 456 aa3.85□□□□□ -1.79
PEP12YOR036W AIM44Q99299 758 aa3.85□□□□□ -1.79
PEP12YOR036W CDC34P14682 295 aa3.84□□□□□ -1.79
PEP12YOR036W SED4P25365 1065 aa3.84□□□□□ -1.79
PEP12YOR036W SVF1Q05515 481 aa3.84□□□□□ -1.79
PEP12YOR036W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
PEP12YOR036W SUT2Q12286 268 aa3.84□□□□□ -1.79
PEP12YOR036W CDC12P32468 407 aaKnown RBP3.83□□□□□ -1.8
PEP12YOR036W RAI1P53063 387 aaKnown RBP3.82□□□□□ -1.8
PEP12YOR036W MRH1Q12117 320 aaPredicted RBP3.82□□□□□ -1.8
PEP12YOR036W BNR1P40450 1375 aa3.81□□□□□ -1.8
PEP12YOR036W SEC21P32074 935 aaKnown RBP3.81□□□□□ -1.8
PEP12YOR036W RPC82P32349 654 aa3.81□□□□□ -1.8
PEP12YOR036W PPS1P38148 807 aa3.81□□□□□ -1.8
PEP12YOR036W OYE2Q03558 400 aaKnown RBP3.81□□□□□ -1.8
PEP12YOR036W HBT1Q07653 1046 aaKnown RBP3.81□□□□□ -1.8
PEP12YOR036W GYP7P48365 746 aa3.8□□□□□ -1.8
PEP12YOR036W RMD1Q03441 430 aa3.8□□□□□ -1.8
PEP12YOR036W SPO20Q04359 397 aa3.8□□□□□ -1.8
PEP12YOR036W SSL1Q04673 461 aaPredicted RBP3.8□□□□□ -1.8
PEP12YOR036W FRE5Q08908 694 aa3.8□□□□□ -1.8
PEP12YOR036W YPR196WQ06595 470 aa3.79□□□□□ -1.8
PEP12YOR036W PEX19Q07418 342 aa3.79□□□□□ -1.8
PEP12YOR036W MDM10P18409 493 aa3.78□□□□□ -1.8
PEP12YOR036W ABD1P32783 436 aaPredicted RBP3.78□□□□□ -1.8
PEP12YOR036W PET112P33893 541 aa3.78□□□□□ -1.8
PEP12YOR036W PIN4P34217 668 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
PEP12YOR036W CTF13P35203 478 aa3.78□□□□□ -1.8
PEP12YOR036W TSL1P38427 1098 aaKnown RBP3.78□□□□□ -1.8
PEP12YOR036W OCA5P38738 679 aa3.78□□□□□ -1.8
PEP12YOR036W SRP1Q02821 542 aaKnown RBP3.78□□□□□ -1.8
PEP12YOR036W NOT3P06102 836 aaKnown RBP3.77□□□□□ -1.81
PEP12YOR036W FBP1P09201 348 aa3.77□□□□□ -1.81
PEP12YOR036W NAP1P25293 417 aaKnown RBP3.77□□□□□ -1.81
PEP12YOR036W TDP1P38319 544 aa3.77□□□□□ -1.81
PEP12YOR036W YHL017WP38745 532 aa3.77□□□□□ -1.81
PEP12YOR036W MBP1P39678 833 aa3.77□□□□□ -1.81
PEP12YOR036W ELO3P40319 345 aa3.77□□□□□ -1.81
PEP12YOR036W YTA7P40340 1379 aa3.76□□□□□ -1.81
PEP12YOR036W TUB3P09734 445 aaKnown RBP3.76□□□□□ -1.81
PEP12YOR036W PPZ2P33329 710 aa3.76□□□□□ -1.81
PEP12YOR036W FLO10P36170 1169 aa3.76□□□□□ -1.81
PEP12YOR036W IMO32P53219 342 aa3.76□□□□□ -1.81
PEP12YOR036W ADY4Q05955 493 aa3.76□□□□□ -1.81
PEP12YOR036W DUS3Q06053 668 aaKnown RBP3.76□□□□□ -1.81
PEP12YOR036W AFT2Q08957 416 aa3.76□□□□□ -1.81
PEP12YOR036W STE13P33894 931 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms