RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W CUS1Q02554 436 aaPredicted RBP8.12□□□□□ -1.11
HDA1YNL021W HEH2Q03281 663 aa8.12□□□□□ -1.11
HDA1YNL021W BUL2Q03758 920 aaKnown RBP8.12□□□□□ -1.11
HDA1YNL021W YML082WQ04533 649 aaKnown RBP8.12□□□□□ -1.11
HDA1YNL021W RAD18P10862 487 aa8.12□□□□□ -1.11
HDA1YNL021W OPI1P21957 404 aa8.12□□□□□ -1.11
HDA1YNL021W PTH2P34222 208 aa8.12□□□□□ -1.11
HDA1YNL021W PTC2P39966 464 aaKnown RBP8.12□□□□□ -1.11
HDA1YNL021W YDR056CQ12025 205 aa8.12□□□□□ -1.11
HDA1YNL021W SYP1P25623 870 aaKnown RBP8.11□□□□□ -1.11
HDA1YNL021W SAH1P39954 449 aaKnown RBP8.11□□□□□ -1.11
HDA1YNL021W MNT3P40549 630 aa8.11□□□□□ -1.11
HDA1YNL021W MPH1P40562 993 aa8.11□□□□□ -1.11
HDA1YNL021W SKP1P52286 194 aa8.11□□□□□ -1.11
HDA1YNL021W YLR419WQ06698 1435 aaKnown RBP8.11□□□□□ -1.11
HDA1YNL021W AEP2P22136 580 aa8.11□□□□□ -1.11
HDA1YNL021W PRP19P32523 503 aaKnown RBP8.11□□□□□ -1.11
HDA1YNL021W HIS6P40545 261 aa8.11□□□□□ -1.11
HDA1YNL021W YPR071WQ12346 211 aa8.11□□□□□ -1.11
HDA1YNL021W BCK1Q01389 1478 aa8.1□□□□□ -1.11
HDA1YNL021W INH1P01097 85 aa8.1□□□□□ -1.11
HDA1YNL021W CDC31P06704 161 aaKnown RBP8.1□□□□□ -1.11
HDA1YNL021W YBR287WP38355 427 aa8.1□□□□□ -1.11
HDA1YNL021W DLD3P39976 496 aaKnown RBP8.1□□□□□ -1.11
HDA1YNL021W ESL1P40456 1118 aa8.1□□□□□ -1.11
HDA1YNL021W SAP185P40856 1058 aa8.1□□□□□ -1.11
HDA1YNL021W CIA1Q05583 330 aa8.1□□□□□ -1.11
HDA1YNL021W RAD9P14737 1309 aa8.09□□□□□ -1.11
HDA1YNL021W SPT7P35177 1332 aa8.09□□□□□ -1.11
HDA1YNL021W HVG1P0CE11 249 aa8.09□□□□□ -1.11
HDA1YNL021W SDH2P21801 266 aa8.09□□□□□ -1.11
HDA1YNL021W GSY1P23337 708 aa8.09□□□□□ -1.11
HDA1YNL021W GFD2P25370 566 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W AFR1P33304 620 aa8.09□□□□□ -1.11
HDA1YNL021W SPC29P33419 253 aa8.09□□□□□ -1.11
HDA1YNL021W SPT23P35210 1082 aa8.09□□□□□ -1.11
HDA1YNL021W APL2P36000 726 aaPredicted RBP8.09□□□□□ -1.11
HDA1YNL021W PCM1P38628 557 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W CKB2P38930 258 aa8.09□□□□□ -1.11
HDA1YNL021W ERR3P42222 437 aa8.09□□□□□ -1.11
HDA1YNL021W GUS1P46655 708 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
HDA1YNL021W CWC22P53333 577 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W YNR040WP53736 256 aa8.09□□□□□ -1.11
HDA1YNL021W SPP1Q03012 353 aa8.09□□□□□ -1.11
HDA1YNL021W DED1P06634 604 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W TY1A-LR4P0C2I8 440 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W TY1A-DR6P0CX70 440 aa8.09□□□□□ -1.11
HDA1YNL021W TY1A-ER1P0CX71 440 aa8.09□□□□□ -1.11
HDA1YNL021W TY1A-LR2P0CX72 440 aa8.09□□□□□ -1.11
HDA1YNL021W TY1A-PLP0CX73 440 aa8.09□□□□□ -1.11
HDA1YNL021W TY1A-JR1P0CX74 440 aa8.09□□□□□ -1.11
HDA1YNL021W TY1A-LR3P0CX75 440 aa8.09□□□□□ -1.11
HDA1YNL021W TY1A-ML2P0CX76 440 aa8.09□□□□□ -1.11
HDA1YNL021W DBP5P20449 482 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W SPE2P21182 396 aa8.09□□□□□ -1.11
HDA1YNL021W SLA1P32790 1244 aa8.09□□□□□ -1.11
HDA1YNL021W DOM34P33309 386 aa8.09□□□□□ -1.11
HDA1YNL021W YEL1P34225 687 aa8.09□□□□□ -1.11
HDA1YNL021W ALG2P43636 503 aa8.09□□□□□ -1.11
HDA1YNL021W TAF1P46677 1066 aa8.09□□□□□ -1.11
HDA1YNL021W MAK10Q02197 733 aa8.09□□□□□ -1.11
HDA1YNL021W YTM1Q12024 460 aaPredicted RBP8.09□□□□□ -1.11
HDA1YNL021W TY1A-GR1Q12085 440 aa8.09□□□□□ -1.11
HDA1YNL021W TY1A-PR3Q6Q5H1 440 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W TY1A-OLQ92392 440 aaKnown RBP8.09□□□□□ -1.11
HDA1YNL021W PHR1P05066 565 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
HDA1YNL021W HEM12P32347 362 aaPredicted RBP8.08□□□□□ -1.12
HDA1YNL021W ERT1P38140 529 aa8.08□□□□□ -1.12
HDA1YNL021W RIM4P38741 713 aa8.08□□□□□ -1.12
HDA1YNL021W ACA1P39970 489 aa8.08□□□□□ -1.12
HDA1YNL021W SIT1P39980 628 aa8.08□□□□□ -1.12
HDA1YNL021W PSH1Q12161 406 aa8.08□□□□□ -1.12
HDA1YNL021W CNN1P43618 361 aa8.08□□□□□ -1.12
HDA1YNL021W NCR1Q12200 1170 aa8.08□□□□□ -1.12
HDA1YNL021W IRE1P32361 1115 aa8.07□□□□□ -1.12
HDA1YNL021W AFG2P32794 780 aa8.07□□□□□ -1.12
HDA1YNL021W EBP2P36049 427 aaKnown RBP8.07□□□□□ -1.12
HDA1YNL021W YKL133CP36066 463 aa8.07□□□□□ -1.12
HDA1YNL021W MSN5P52918 1224 aa8.07□□□□□ -1.12
HDA1YNL021W TRS130Q03660 1102 aa8.07□□□□□ -1.12
HDA1YNL021W PDS5Q04264 1277 aa8.07□□□□□ -1.12
HDA1YNL021W EST2Q06163 884 aa8.07□□□□□ -1.12
HDA1YNL021W GLO4Q12320 285 aa8.07□□□□□ -1.12
HDA1YNL021W VPS5Q92331 675 aa8.07□□□□□ -1.12
HDA1YNL021W PDC6P26263 563 aaKnown RBP8.06□□□□□ -1.12
HDA1YNL021W IMP2'P32351 346 aa8.06□□□□□ -1.12
HDA1YNL021W GZF3P42944 551 aaKnown RBP8.06□□□□□ -1.12
HDA1YNL021W PHM6Q05637 104 aa8.06□□□□□ -1.12
HDA1YNL021W LEU1P07264 779 aaKnown RBP8.06□□□□□ -1.12
HDA1YNL021W SRB7P47822 140 aa8.06□□□□□ -1.12
HDA1YNL021W MED1Q12321 566 aa8.06□□□□□ -1.12
HDA1YNL021W QRI7P43122 407 aa8.05□□□□□ -1.12
HDA1YNL021W CAF16P43569 289 aa8.05□□□□□ -1.12
HDA1YNL021W GYP8P43570 497 aa8.05□□□□□ -1.12
HDA1YNL021W MEH1Q02205 184 aa8.05□□□□□ -1.12
HDA1YNL021W YDR306CQ06640 478 aa8.05□□□□□ -1.12
HDA1YNL021W VIP1Q06685 1146 aaKnown RBP8.05□□□□□ -1.12
HDA1YNL021W SAP30P38429 201 aa8.05□□□□□ -1.12
HDA1YNL021W SPO71Q03868 1245 aa8.05□□□□□ -1.12
HDA1YNL021W YDR338CQ05497 695 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms