RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W VAC8P39968 578 aa2.5□□□□□ -2.01
HSH155YMR288W BRE4Q07660 1125 aa2.5□□□□□ -2.01
HSH155YMR288W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
HSH155YMR288W FAL1Q12099 399 aaKnown RBP2.5□□□□□ -2.01
HSH155YMR288W COQ4O13525 335 aa2.49□□□□□ -2.01
HSH155YMR288W CYC7P00045 113 aa2.49□□□□□ -2.01
HSH155YMR288W NAM7P30771 971 aaKnown RBP2.49□□□□□ -2.01
HSH155YMR288W MSH4P40965 878 aaPredicted RBP2.49□□□□□ -2.01
HSH155YMR288W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
HSH155YMR288W ROD1Q02805 837 aa2.49□□□□□ -2.01
HSH155YMR288W HDA2Q06629 674 aa2.49□□□□□ -2.01
HSH155YMR288W NBA1Q08229 501 aaKnown RBP2.49□□□□□ -2.01
HSH155YMR288W SLM3Q12093 417 aa2.49□□□□□ -2.01
HSH155YMR288W YDR034W-BQ6Q5X2 51 aa2.49□□□□□ -2.01
HSH155YMR288W CDC34P14682 295 aa2.49□□□□□ -2.01
HSH155YMR288W SYP1P25623 870 aaKnown RBP2.49□□□□□ -2.01
HSH155YMR288W WHI3P34761 661 aaKnown RBP2.49□□□□□ -2.01
HSH155YMR288W PNT1P38969 423 aa2.49□□□□□ -2.01
HSH155YMR288W RSB1Q08417 382 aa2.49□□□□□ -2.01
HSH155YMR288W YLL067CQ07888 1374 aa2.49□□□□□ -2.01
HSH155YMR288W LYP1P32487 611 aa2.48□□□□□ -2.01
HSH155YMR288W QNS1P38795 714 aaKnown RBP2.48□□□□□ -2.01
HSH155YMR288W CHZ1P40019 153 aaPredicted RBP2.48□□□□□ -2.01
HSH155YMR288W RRT14P40470 206 aa2.48□□□□□ -2.01
HSH155YMR288W HNT2P49775 206 aa2.48□□□□□ -2.01
HSH155YMR288W YRB30P53107 440 aaPredicted RBP2.48□□□□□ -2.01
HSH155YMR288W ALD6P54115 500 aaKnown RBP2.48□□□□□ -2.01
HSH155YMR288W RSA3Q05942 220 aaKnown RBP2.48□□□□□ -2.01
HSH155YMR288W PIN2Q12057 282 aa2.48□□□□□ -2.01
HSH155YMR288W BAS1P22035 811 aa2.48□□□□□ -2.01
HSH155YMR288W PUF4P25339 888 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
HSH155YMR288W ALG3P38179 458 aa2.48□□□□□ -2.01
HSH155YMR288W CNN1P43618 361 aa2.48□□□□□ -2.01
HSH155YMR288W SPP382Q06411 708 aaPredicted RBP2.48□□□□□ -2.01
HSH155YMR288W PUS7Q08647 676 aaKnown RBP2.48□□□□□ -2.01
HSH155YMR288W YPL260WQ08977 551 aa2.48□□□□□ -2.01
HSH155YMR288W CCZ1P38273 704 aa2.48□□□□□ -2.01
HSH155YMR288W RGD1P38339 666 aa2.48□□□□□ -2.01
HSH155YMR288W ADE16P54113 591 aaKnown RBP2.48□□□□□ -2.01
HSH155YMR288W VPS16Q03308 798 aa2.48□□□□□ -2.01
HSH155YMR288W YOR352WQ08816 343 aa2.48□□□□□ -2.01
HSH155YMR288W SPO21Q12411 609 aa2.48□□□□□ -2.01
HSH155YMR288W MKK2P32491 506 aa2.47□□□□□ -2.01
HSH155YMR288W RDH54P38086 958 aa2.47□□□□□ -2.01
HSH155YMR288W YHL012WP38709 493 aa2.47□□□□□ -2.01
HSH155YMR288W TPO2P53283 614 aa2.47□□□□□ -2.01
HSH155YMR288W TNA1P53322 534 aa2.47□□□□□ -2.01
HSH155YMR288W DBP5P20449 482 aaKnown RBP2.47□□□□□ -2.01
HSH155YMR288W YKL107WP34251 309 aa2.47□□□□□ -2.01
HSH155YMR288W TYW3P53177 273 aa2.47□□□□□ -2.01
HSH155YMR288W CSR2Q12734 1121 aa2.47□□□□□ -2.01
HSH155YMR288W INO1P11986 533 aa2.46□□□□□ -2.02
HSH155YMR288W PRI2P20457 528 aa2.46□□□□□ -2.02
HSH155YMR288W NMD3P38861 518 aaKnown RBP2.46□□□□□ -2.02
HSH155YMR288W UBP5P39944 805 aa2.46□□□□□ -2.02
HSH155YMR288W NNF1P47149 201 aa2.46□□□□□ -2.02
HSH155YMR288W FAA4P47912 694 aaKnown RBP2.46□□□□□ -2.02
HSH155YMR288W ALT1P52893 592 aa2.46□□□□□ -2.02
HSH155YMR288W VPS4P52917 437 aa2.46□□□□□ -2.02
HSH155YMR288W RAT1Q02792 1006 aaKnown RBP2.46□□□□□ -2.02
HSH155YMR288W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
HSH155YMR288W TDA5Q06417 326 aaKnown RBP2.46□□□□□ -2.02
HSH155YMR288W ADP1P25371 1049 aa2.46□□□□□ -2.02
HSH155YMR288W KIP1P28742 1111 aa2.46□□□□□ -2.02
HSH155YMR288W MLS1P30952 554 aa2.46□□□□□ -2.02
HSH155YMR288W ELM1P32801 640 aa2.46□□□□□ -2.02
HSH155YMR288W RER2P35196 286 aa2.46□□□□□ -2.02
HSH155YMR288W KTR4P38131 464 aa2.46□□□□□ -2.02
HSH155YMR288W PEA2P40091 420 aa2.46□□□□□ -2.02
HSH155YMR288W YJL045WP47052 634 aa2.46□□□□□ -2.02
HSH155YMR288W HOS3Q02959 697 aaKnown RBP2.46□□□□□ -2.02
HSH155YMR288W RKM4Q12504 494 aa2.46□□□□□ -2.02
HSH155YMR288W SEN1Q00416 2231 aaKnown RBP2.46□□□□□ -2.02
HSH155YMR288W TRP2P00899 507 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W RAD4P14736 754 aa2.45□□□□□ -2.02
HSH155YMR288W PRO1P32264 428 aa2.45□□□□□ -2.02
HSH155YMR288W PAH1P32567 862 aa2.45□□□□□ -2.02
HSH155YMR288W MDL2P33311 773 aa2.45□□□□□ -2.02
HSH155YMR288W PIN4P34217 668 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
HSH155YMR288W MOT2P34909 587 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W GPB2P39717 880 aa2.45□□□□□ -2.02
HSH155YMR288W TRE1Q08919 783 aa2.45□□□□□ -2.02
HSH155YMR288W RPO41P13433 1351 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W GSC2P40989 1895 aa2.45□□□□□ -2.02
HSH155YMR288W STV1P37296 890 aa2.45□□□□□ -2.02
HSH155YMR288W PAF1P38351 445 aa2.45□□□□□ -2.02
HSH155YMR288W GTS1P40956 396 aa2.45□□□□□ -2.02
HSH155YMR288W ATG36P46983 293 aa2.45□□□□□ -2.02
HSH155YMR288W TRM44Q02648 567 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W SGD1Q06132 899 aa2.45□□□□□ -2.02
HSH155YMR288W HIP1P06775 603 aa2.45□□□□□ -2.02
HSH155YMR288W RPS24AP0CX31 135 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W RPS24BP0CX32 135 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W AIM26P32858 118 aa2.45□□□□□ -2.02
HSH155YMR288W PTC7P38797 343 aa2.45□□□□□ -2.02
HSH155YMR288W SHC1P39000 512 aa2.45□□□□□ -2.02
HSH155YMR288W YLR225CQ05948 407 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W MAG2Q06436 670 aaKnown RBP2.45□□□□□ -2.02
HSH155YMR288W OPI10Q08202 246 aa2.45□□□□□ -2.02
HSH155YMR288W GNT1Q12096 491 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms