RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM2	YKR056W	KRI1	P42846	591 aa	Known RBP	3.22	□□□□□ -1.89
TRM2	YKR056W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
TRM2	YKR056W	YJR096W	P47137	282 aa		3.22	□□□□□ -1.89
TRM2	YKR056W	ECL1	P48235	211 aa		3.22	□□□□□ -1.89
TRM2	YKR056W	PRP43	P53131	767 aa	Known RBP	3.22	□□□□□ -1.89
TRM2	YKR056W	SPC105	P53148	917 aa		3.22	□□□□□ -1.89
TRM2	YKR056W	DSE4	P53753	1117 aa		3.22	□□□□□ -1.89
TRM2	YKR056W	UBX4	P54730	416 aa		3.22	□□□□□ -1.89
TRM2	YKR056W	MPH2	P0CD99	609 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	SFL1	P20134	766 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	DAL3	P32459	195 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	MTC2	P34246	357 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	GIP4	P39732	760 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	SIT1	P39980	628 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	GIP2	P40036	548 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	TAF1	P46677	1066 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	SDH1	Q00711	640 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	HFD1	Q04458	532 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	RIP-Chip
TRM2	YKR056W	YEF3	P16521	1044 aa	Known RBP	3.21	□□□□□ -1.9
TRM2	YKR056W	MLS1	P30952	554 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	DOM34	P33309	386 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	EXO84	P38261	753 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	SAH1	P39954	449 aa	Known RBP	3.21	□□□□□ -1.9
TRM2	YKR056W	POL5	P39985	1022 aa	Known RBP	3.21	□□□□□ -1.9
TRM2	YKR056W	GPP2	P40106	250 aa	Known RBP	3.21	□□□□□ -1.9
TRM2	YKR056W	SOK2	P53438	785 aa	Predicted RBP	3.21	□□□□□ -1.9
TRM2	YKR056W	GIR2	Q03768	265 aa	Predicted RBP	3.21	□□□□□ -1.9
TRM2	YKR056W	SOG2	Q08817	791 aa		3.21	□□□□□ -1.9
TRM2	YKR056W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
TRM2	YKR056W	RAD18	P10862	487 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	GAS1	P22146	559 aa	Known RBP	3.2	□□□□□ -1.9
TRM2	YKR056W	NFU1	P32860	256 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	SPC29	P33419	253 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	YKL077W	P36081	392 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	MCM7	P38132	845 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	SHU2	P38957	223 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	OAF1	P39720	1047 aa	Predicted RBP	3.2	□□□□□ -1.9
TRM2	YKR056W	GYP8	P43570	497 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	ALG2	P43636	503 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	NIT2	P47016	307 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	VMS1	Q04311	632 aa	Known RBP	3.2	□□□□□ -1.9
TRM2	YKR056W	YDR306C	Q06640	478 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	TRE2	Q08693	809 aa		3.2	□□□□□ -1.9
TRM2	YKR056W	YKL151C	P36059	337 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	ALG3	P38179	458 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	PCM1	P38628	557 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	PNT1	P38969	423 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	VPS27	P40343	622 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	HOS4	P40480	1083 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	RSC8	P43609	557 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	SPO71	Q03868	1245 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	DFG16	Q99234	619 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	NPP1	P25353	742 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	DPB3	P27344	201 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	PTP2	P29461	750 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	RPN12	P32496	274 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	YHL041W	P38730	149 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	CKB2	P38930	258 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	NOC2	P39744	710 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	CAF16	P43569	289 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	DUG1	P43616	481 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	UTP22	P53254	1237 aa	Predicted RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	PBP1	P53297	722 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	HAS1	Q03532	505 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	YDR338C	Q05497	695 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	ENT2	Q05785	613 aa		3.19	□□□□□ -1.9
TRM2	YKR056W	RRP6	Q12149	733 aa	Known RBP	3.19	□□□□□ -1.9
TRM2	YKR056W	YER152C	P10356	443 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	MIH1	P23748	554 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	PRP19	P32523	503 aa	Known RBP	3.18	□□□□□ -1.9
TRM2	YKR056W	YEL1	P34225	687 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	MCD4	P36051	919 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	TRZ1	P36159	838 aa	Predicted RBP	3.18	□□□□□ -1.9
TRM2	YKR056W	KTR4	P38131	464 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	YGR283C	P53336	341 aa	Predicted RBP	3.18	□□□□□ -1.9
TRM2	YKR056W	RKM2	Q03942	479 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	RSC2	Q06488	889 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	YIG1	Q08956	461 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	GNT1	Q12096	491 aa		3.18	□□□□□ -1.9
TRM2	YKR056W	RPL11A	P0C0W9	174 aa	Known RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	GSY1	P23337	708 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	KCC4	P25389	1037 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	DBF20	P32328	564 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	HEM12	P32347	362 aa	Predicted RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	AAR2	P32357	355 aa	Predicted RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	NIC96	P34077	839 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	RGD1	P38339	666 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	MXR1	P40029	184 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	TOK1	P40310	691 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	RPT2	P40327	437 aa	Known RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	AIM14	P53109	570 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	YNR063W	P53749	607 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	ATG33	Q06485	197 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	RSC3	Q06639	885 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	YTM1	Q12024	460 aa	Predicted RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	RPL11B	Q3E757	174 aa	Predicted RBP	3.17	□□□□□ -1.9
TRM2	YKR056W	YOL087C	Q99247	1116 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	MSS18	P08593	268 aa		3.17	□□□□□ -1.9
TRM2	YKR056W	FET4	P40988	552 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms