RNA–Protein interactions for RNA: YJL024C

APS3, Transcript of Small subunit of the clathrin-associated adaptor complex AP-3, yeast

Gene APS3, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS3	YJL024C	PPS1	P38148	807 aa		6.3	□□□□□ -1.4
APS3	YJL024C	PTC2	P39966	464 aa	Known RBP	6.3	□□□□□ -1.4
APS3	YJL024C	ULP2	P40537	1034 aa	Predicted RBP	6.3	□□□□□ -1.4
APS3	YJL024C	TFG2	P41896	400 aa	Predicted RBP	6.3	□□□□□ -1.4
APS3	YJL024C	EBS1	Q03466	884 aa	Known RBP	6.3	□□□□□ -1.4
APS3	YJL024C	YMR321C	Q04898	105 aa		6.3	□□□□□ -1.4
APS3	YJL024C	CLN3	P13365	580 aa		6.29	□□□□□ -1.4
APS3	YJL024C	PHO13	P19881	312 aa		6.29	□□□□□ -1.4
APS3	YJL024C	YKL091C	P33324	310 aa	Known RBP	6.29	□□□□□ -1.4
APS3	YJL024C	PGM2	P37012	569 aa	Known RBP	6.29	□□□□□ -1.4
APS3	YJL024C	REG2	P38232	338 aa		6.29	□□□□□ -1.4
APS3	YJL024C	FIS1	P40515	155 aa		6.29	□□□□□ -1.4
APS3	YJL024C	STR2	P47164	639 aa		6.29	□□□□□ -1.4
APS3	YJL024C	ARK1	P53974	638 aa		6.29	□□□□□ -1.4
APS3	YJL024C	CRD1	Q07560	283 aa		6.29	□□□□□ -1.4
APS3	YJL024C	YAP7	Q08182	245 aa		6.29	□□□□□ -1.4
APS3	YJL024C	TCO89	Q08921	799 aa		6.29	□□□□□ -1.4
APS3	YJL024C	CDC37	P06101	506 aa	Known RBP	6.28	□□□□□ -1.4
APS3	YJL024C	RPS6A	P0CX37	236 aa	Known RBP	6.28	□□□□□ -1.4
APS3	YJL024C	RPS6B	P0CX38	236 aa	Predicted RBP	6.28	□□□□□ -1.4
APS3	YJL024C	UBP5	P39944	805 aa		6.28	□□□□□ -1.4
APS3	YJL024C	SPR3	P41901	512 aa		6.28	□□□□□ -1.4
APS3	YJL024C	TOS3	P43637	560 aa		6.28	□□□□□ -1.4
APS3	YJL024C	NBP1	P52919	319 aa	Predicted RBP	6.28	□□□□□ -1.4
APS3	YJL024C	VPS75	P53853	264 aa		6.28	□□□□□ -1.4
APS3	YJL024C	DMA2	P53924	522 aa		6.28	□□□□□ -1.4
APS3	YJL024C	YAF9	P53930	226 aa		6.28	□□□□□ -1.4
APS3	YJL024C	SEC5	P89102	971 aa		6.28	□□□□□ -1.4
APS3	YJL024C	SLD5	Q03406	294 aa		6.28	□□□□□ -1.4
APS3	YJL024C	TCP1	P12612	559 aa	Known RBP	6.27	□□□□□ -1.41
APS3	YJL024C	CYC8	P14922	966 aa		6.27	□□□□□ -1.41
APS3	YJL024C	OM45	P16547	393 aa		6.27	□□□□□ -1.41
APS3	YJL024C	SPO11	P23179	398 aa		6.27	□□□□□ -1.41
APS3	YJL024C	YUR1	P26725	428 aa		6.27	□□□□□ -1.41
APS3	YJL024C	TRK2	P28584	889 aa		6.27	□□□□□ -1.41
APS3	YJL024C	YEL1	P34225	687 aa		6.27	□□□□□ -1.41
APS3	YJL024C	RPC25	P35718	212 aa		6.27	□□□□□ -1.41
APS3	YJL024C	UBP15	P50101	1230 aa		6.27	□□□□□ -1.41
APS3	YJL024C	HFM1	P51979	1187 aa		6.27	□□□□□ -1.41
APS3	YJL024C	SCS3	P53012	380 aa		6.27	□□□□□ -1.41
APS3	YJL024C	ZPR1	P53303	486 aa	Known RBP	6.27	□□□□□ -1.41
APS3	YJL024C	TY3A-G	Q12173	290 aa		6.27	□□□□□ -1.41
APS3	YJL024C	YPR015C	Q12531	247 aa		6.27	□□□□□ -1.41
APS3	YJL024C	YDR461C-A	Q2V2P7	80 aa		6.27	□□□□□ -1.41
APS3	YJL024C	TY3A-I	Q99219	290 aa		6.27	□□□□□ -1.41
APS3	YJL024C	PDC1	P06169	563 aa	Known RBP	6.26	□□□□□ -1.41
APS3	YJL024C	MAK16	P10962	306 aa	Predicted RBP	6.26	□□□□□ -1.41
APS3	YJL024C	PCK1	P10963	549 aa		6.26	□□□□□ -1.41
APS3	YJL024C	DAL7	P21826	554 aa		6.26	□□□□□ -1.41
APS3	YJL024C	SEC65	P29478	273 aa		6.26	□□□□□ -1.41
APS3	YJL024C	SAP190	P36123	1033 aa		6.26	□□□□□ -1.41
APS3	YJL024C	MIP6	P38760	659 aa	Known RBP	6.26	□□□□□ -1.41
APS3	YJL024C	CTM1	P38818	585 aa		6.26	□□□□□ -1.41
APS3	YJL024C	RTT107	P38850	1070 aa		6.26	□□□□□ -1.41
APS3	YJL024C	TOF1	P53840	1238 aa		6.26	□□□□□ -1.41
APS3	YJL024C	NCS2	P53923	493 aa	Predicted RBP	6.26	□□□□□ -1.41
APS3	YJL024C	COG4	Q06096	861 aa		6.26	□□□□□ -1.41
APS3	YJL024C	CUR1	Q06469	252 aa		6.26	□□□□□ -1.41
APS3	YJL024C	YPL277C	Q08989	487 aa		6.26	□□□□□ -1.41
APS3	YJL024C	APL4	Q12028	832 aa		6.26	□□□□□ -1.41
APS3	YJL024C	MSH3	P25336	1018 aa		6.25	□□□□□ -1.41
APS3	YJL024C	YSC83	P32792	385 aa		6.25	□□□□□ -1.41
APS3	YJL024C	SEC8	P32855	1065 aa		6.25	□□□□□ -1.41
APS3	YJL024C	RGT1	P32862	1170 aa		6.25	□□□□□ -1.41
APS3	YJL024C	TFC4	P33339	1025 aa		6.25	□□□□□ -1.41
APS3	YJL024C	MNR2	P35724	969 aa		6.25	□□□□□ -1.41
APS3	YJL024C	EBP2	P36049	427 aa	Known RBP	6.25	□□□□□ -1.41
APS3	YJL024C	KIC1	P38692	1080 aa		6.25	□□□□□ -1.41
APS3	YJL024C	ERC1	P38767	581 aa		6.25	□□□□□ -1.41
APS3	YJL024C	RSC30	P38781	883 aa		6.25	□□□□□ -1.41
APS3	YJL024C	RPN3	P40016	523 aa	Known RBP	6.25	□□□□□ -1.41
APS3	YJL024C	HMF1	P40037	129 aa	Known RBP	6.25	□□□□□ -1.41
APS3	YJL024C	YFL034W	P43564	1073 aa		6.25	□□□□□ -1.41
APS3	YJL024C	RPS7B	P48164	190 aa	Known RBP	6.25	□□□□□ -1.41
APS3	YJL024C	HUL5	P53119	910 aa		6.25	□□□□□ -1.41
APS3	YJL024C	ROD1	Q02805	837 aa		6.25	□□□□□ -1.41
APS3	YJL024C	YLR225C	Q05948	407 aa	Known RBP	6.25	□□□□□ -1.41
APS3	YJL024C	CWC2	Q12046	339 aa	Predicted RBP	6.25	□□□□□ -1.41
APS3	YJL024C	TIF6	Q12522	245 aa	Known RBP	6.25	□□□□□ -1.41
APS3	YJL024C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
APS3	YJL024C	TVP38	P36164	337 aa		6.24	□□□□□ -1.41
APS3	YJL024C	SPT8	P38915	602 aa		6.24	□□□□□ -1.41
APS3	YJL024C	AVT1	P47082	602 aa		6.24	□□□□□ -1.41
APS3	YJL024C	VID30	P53076	958 aa		6.24	□□□□□ -1.41
APS3	YJL024C	CAF130	P53280	1122 aa	Predicted RBP	6.24	□□□□□ -1.41
APS3	YJL024C	CTR9	P89105	1077 aa		6.24	□□□□□ -1.41
APS3	YJL024C	SPO75	Q07798	868 aa		6.24	□□□□□ -1.41
APS3	YJL024C	MED1	Q12321	566 aa		6.24	□□□□□ -1.41
APS3	YJL024C	TRM11	Q12463	433 aa		6.24	□□□□□ -1.41
APS3	YJL024C	DED1	P06634	604 aa	Known RBP	6.23	□□□□□ -1.41
APS3	YJL024C	PHO8	P11491	566 aa		6.23	□□□□□ -1.41
APS3	YJL024C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
APS3	YJL024C	RAM1	P22007	431 aa		6.23	□□□□□ -1.41
APS3	YJL024C	KIN82	P25341	720 aa		6.23	□□□□□ -1.41
APS3	YJL024C	RPC53	P25441	422 aa		6.23	□□□□□ -1.41
APS3	YJL024C	CDC48	P25694	835 aa	Known RBP	6.23	□□□□□ -1.41
APS3	YJL024C	FLR1	P38124	548 aa		6.23	□□□□□ -1.41
APS3	YJL024C	EFM2	P38347	419 aa		6.23	□□□□□ -1.41
APS3	YJL024C	YEL025C	P39991	1188 aa		6.23	□□□□□ -1.41
APS3	YJL024C	MXR1	P40029	184 aa		6.23	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms