RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W VBA3P25594 458 aa6.89□□□□□ -1.31
SPO12YHR152W YBR238CP38330 731 aaKnown RBP6.89□□□□□ -1.31
SPO12YHR152W YKE2P52553 114 aa6.89□□□□□ -1.31
SPO12YHR152W YGR283CP53336 341 aaPredicted RBP6.89□□□□□ -1.31
SPO12YHR152W YNL193WP53870 558 aa6.89□□□□□ -1.31
SPO12YHR152W YPL034WQ03083 165 aa6.89□□□□□ -1.31
SPO12YHR152W SSB1P11484 613 aaKnown RBP6.88□□□□□ -1.31
SPO12YHR152W CHS2P14180 963 aa6.88□□□□□ -1.31
SPO12YHR152W CDC48P25694 835 aaKnown RBP6.88□□□□□ -1.31
SPO12YHR152W EMC3P36039 253 aa6.88□□□□□ -1.31
SPO12YHR152W ICP55P40051 511 aa6.88□□□□□ -1.31
SPO12YHR152W SSB2P40150 613 aaKnown RBP6.88□□□□□ -1.31
SPO12YHR152W GYP8P43570 497 aa6.88□□□□□ -1.31
SPO12YHR152W YLR001CQ07895 862 aa6.88□□□□□ -1.31
SPO12YHR152W MCA1Q08601 432 aa6.88□□□□□ -1.31
SPO12YHR152W ENV7Q12003 364 aa6.88□□□□□ -1.31
SPO12YHR152W SVS1Q12254 260 aa6.88□□□□□ -1.31
SPO12YHR152W YLR122CQ12312 125 aa6.88□□□□□ -1.31
SPO12YHR152W YEN1P40028 759 aa6.87□□□□□ -1.31
SPO12YHR152W HFM1P51979 1187 aa6.87□□□□□ -1.31
SPO12YHR152W DAM1P53267 343 aa6.87□□□□□ -1.31
SPO12YHR152W SFB2P53953 876 aa6.87□□□□□ -1.31
SPO12YHR152W ATP25Q03153 612 aa6.87□□□□□ -1.31
SPO12YHR152W CDC9P04819 755 aa6.86□□□□□ -1.31
SPO12YHR152W AIM26P32858 118 aa6.86□□□□□ -1.31
SPO12YHR152W PTC7P38797 343 aa6.86□□□□□ -1.31
SPO12YHR152W GTS1P40956 396 aa6.86□□□□□ -1.31
SPO12YHR152W SEC26P41810 973 aaKnown RBP6.86□□□□□ -1.31
SPO12YHR152W SDH1Q00711 640 aa6.86□□□□□ -1.31
SPO12YHR152W NSI1Q12457 570 aa6.86□□□□□ -1.31
SPO12YHR152W RPC82P32349 654 aa6.85□□□□□ -1.31
SPO12YHR152W MTC2P34246 357 aa6.85□□□□□ -1.31
SPO12YHR152W TY4A-JP47023 414 aa6.85□□□□□ -1.31
SPO12YHR152W HLJ1P48353 224 aa6.85□□□□□ -1.31
SPO12YHR152W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SPO12YHR152W OSW2Q12202 724 aa6.85□□□□□ -1.31
SPO12YHR152W TOM20P35180 183 aa6.84□□□□□ -1.31
SPO12YHR152W KAE1P36132 386 aa6.84□□□□□ -1.31
SPO12YHR152W ABZ1P37254 787 aaPredicted RBP6.84□□□□□ -1.31
SPO12YHR152W YAP1801P38856 637 aa6.84□□□□□ -1.31
SPO12YHR152W NIT3P49954 291 aa6.84□□□□□ -1.31
SPO12YHR152W SSY1Q03770 852 aa6.84□□□□□ -1.31
SPO12YHR152W XYL2Q07993 356 aa6.84□□□□□ -1.31
SPO12YHR152W MET7Q08645 548 aa6.84□□□□□ -1.31
SPO12YHR152W SRD1P09007 221 aa6.83□□□□□ -1.32
SPO12YHR152W GCD1P09032 578 aaPredicted RBP6.83□□□□□ -1.32
SPO12YHR152W MPH2P0CD99 609 aa6.83□□□□□ -1.32
SPO12YHR152W RFC5P38251 354 aa6.83□□□□□ -1.32
SPO12YHR152W YPR196WQ06595 470 aa6.83□□□□□ -1.32
SPO12YHR152W SPS1P08458 490 aa6.82□□□□□ -1.32
SPO12YHR152W ECM21P38167 1117 aaKnown RBP6.82□□□□□ -1.32
SPO12YHR152W PMT3P47190 753 aa6.82□□□□□ -1.32
SPO12YHR152W RSC3Q06639 885 aa6.82□□□□□ -1.32
SPO12YHR152W STO1P34160 861 aaKnown RBP6.81□□□□□ -1.32
SPO12YHR152W YEL1P34225 687 aa6.81□□□□□ -1.32
SPO12YHR152W CAF16P43569 289 aa6.81□□□□□ -1.32
SPO12YHR152W YGR130CP53278 816 aa6.81□□□□□ -1.32
SPO12YHR152W YDR514CQ04408 483 aa6.81□□□□□ -1.32
SPO12YHR152W THI73Q07904 523 aa6.81□□□□□ -1.32
SPO12YHR152W PUS1Q12211 544 aaKnown RBP6.81□□□□□ -1.32
SPO12YHR152W ADP1P25371 1049 aa6.8□□□□□ -1.32
SPO12YHR152W PCL2P25693 308 aa6.8□□□□□ -1.32
SPO12YHR152W MGS1P40151 587 aa6.8□□□□□ -1.32
SPO12YHR152W SDA1P53313 767 aaKnown RBP6.8□□□□□ -1.32
SPO12YHR152W REH1Q06709 432 aa6.8□□□□□ -1.32
SPO12YHR152W RIB2Q12362 591 aaKnown RBP6.8□□□□□ -1.32
SPO12YHR152W RAD18P10862 487 aa6.79□□□□□ -1.32
SPO12YHR152W APL1P27351 700 aa6.79□□□□□ -1.32
SPO12YHR152W YGR237CP50089 785 aa6.79□□□□□ -1.32
SPO12YHR152W NUP145P49687 1317 aa6.78□□□□□ -1.32
SPO12YHR152W CYC7P00045 113 aa6.78□□□□□ -1.32
SPO12YHR152W KIN2P13186 1147 aaKnown RBP6.78□□□□□ -1.32
SPO12YHR152W RFA1P22336 621 aaKnown RBP6.78□□□□□ -1.32
SPO12YHR152W PER1P25625 357 aa6.78□□□□□ -1.32
SPO12YHR152W MCD4P36051 919 aa6.78□□□□□ -1.32
SPO12YHR152W NOG2P53742 486 aaKnown RBP6.78□□□□□ -1.32
SPO12YHR152W UME1Q03010 460 aa6.78□□□□□ -1.32
SPO12YHR152W SIZ1Q04195 904 aa6.78□□□□□ -1.32
SPO12YHR152W COG8Q04632 607 aa6.78□□□□□ -1.32
SPO12YHR152W LPX1Q12405 387 aaKnown RBP6.78□□□□□ -1.32
SPO12YHR152W NOT3P06102 836 aaKnown RBP6.77□□□□□ -1.33
SPO12YHR152W SFL1P20134 766 aa6.77□□□□□ -1.33
SPO12YHR152W HXT16P47185 567 aa6.77□□□□□ -1.33
SPO12YHR152W MET13P53128 600 aa6.77□□□□□ -1.33
SPO12YHR152W GPG1P53130 126 aa6.77□□□□□ -1.33
SPO12YHR152W ENV11P53246 860 aa6.77□□□□□ -1.33
SPO12YHR152W SNP1Q00916 300 aaPredicted RBP6.77□□□□□ -1.33
SPO12YHR152W MSC2Q03455 724 aa6.77□□□□□ -1.33
SPO12YHR152W RSM24Q03976 319 aa6.77□□□□□ -1.33
SPO12YHR152W DAL7P21826 554 aa6.76□□□□□ -1.33
SPO12YHR152W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
SPO12YHR152W URA1P28272 314 aaPredicted RBP6.76□□□□□ -1.33
SPO12YHR152W PAF1P38351 445 aa6.76□□□□□ -1.33
SPO12YHR152W TAD1P53065 400 aa6.76□□□□□ -1.33
SPO12YHR152W TRP3P00937 484 aa6.75□□□□□ -1.33
SPO12YHR152W PCM1P38628 557 aaKnown RBP6.75□□□□□ -1.33
SPO12YHR152W CCT8P47079 568 aaKnown RBP6.75□□□□□ -1.33
SPO12YHR152W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33 RIP-Chip
SPO12YHR152W FOL2P51601 243 aaKnown RBP6.75□□□□□ -1.33
SPO12YHR152W HDA1P53973 706 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms