RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W FPR3P38911 411 aaKnown RBP5.21□□□□□ -1.58
PRP18YGR006W YER158CP40095 573 aa5.21□□□□□ -1.58
PRP18YGR006W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
PRP18YGR006W BUL2Q03758 920 aaKnown RBP5.21□□□□□ -1.58
PRP18YGR006W BRE4Q07660 1125 aa5.21□□□□□ -1.58
PRP18YGR006W NPP1P25353 742 aa5.2□□□□□ -1.58
PRP18YGR006W CDC48P25694 835 aaKnown RBP5.2□□□□□ -1.58
PRP18YGR006W APL1P27351 700 aa5.2□□□□□ -1.58
PRP18YGR006W AFR1P33304 620 aa5.2□□□□□ -1.58
PRP18YGR006W HSP78P33416 811 aa5.2□□□□□ -1.58
PRP18YGR006W TSL1P38427 1098 aaKnown RBP5.2□□□□□ -1.58
PRP18YGR006W TOK1P40310 691 aa5.2□□□□□ -1.58
PRP18YGR006W HSV2P50079 448 aaPredicted RBP5.2□□□□□ -1.58
PRP18YGR006W HFM1P51979 1187 aa5.2□□□□□ -1.58
PRP18YGR006W YBR238CP38330 731 aaKnown RBP5.19□□□□□ -1.58
PRP18YGR006W GDH3P39708 457 aa5.19□□□□□ -1.58
PRP18YGR006W UTP14Q04500 899 aaKnown RBP5.19□□□□□ -1.58
PRP18YGR006W YPR196WQ06595 470 aa5.19□□□□□ -1.58
PRP18YGR006W MSH2P25847 964 aa5.18□□□□□ -1.58
PRP18YGR006W ABZ1P37254 787 aaPredicted RBP5.18□□□□□ -1.58
PRP18YGR006W YAP1801P38856 637 aa5.18□□□□□ -1.58
PRP18YGR006W ALG2P43636 503 aa5.18□□□□□ -1.58
PRP18YGR006W YKE2P52553 114 aa5.18□□□□□ -1.58
PRP18YGR006W SIZ1Q04195 904 aa5.18□□□□□ -1.58
PRP18YGR006W SPC42P36094 363 aa5.17□□□□□ -1.58
PRP18YGR006W ECM21P38167 1117 aaKnown RBP5.17□□□□□ -1.58
PRP18YGR006W MNN1P39106 762 aa5.17□□□□□ -1.58
PRP18YGR006W NPP2P39997 493 aa5.17□□□□□ -1.58
PRP18YGR006W CTH1P47976 325 aa5.17□□□□□ -1.58
PRP18YGR006W NIT3P49954 291 aa5.17□□□□□ -1.58
PRP18YGR006W UGO1Q03327 502 aa5.17□□□□□ -1.58
PRP18YGR006W MSC2Q03455 724 aa5.17□□□□□ -1.58
PRP18YGR006W ERT1P38140 529 aa5.16□□□□□ -1.58
PRP18YGR006W DAM1P53267 343 aa5.16□□□□□ -1.58
PRP18YGR006W SFB2P53953 876 aa5.16□□□□□ -1.58
PRP18YGR006W XYL2Q07993 356 aa5.16□□□□□ -1.58
PRP18YGR006W YOR352WQ08816 343 aa5.15□□□□□ -1.59
PRP18YGR006W RIB2Q12362 591 aaKnown RBP5.15□□□□□ -1.59
PRP18YGR006W CYC1P00044 109 aaPredicted RBP5.14□□□□□ -1.59
PRP18YGR006W PHR1P05066 565 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
PRP18YGR006W MPH2P0CD99 609 aa5.14□□□□□ -1.59
PRP18YGR006W CMP2P14747 604 aa5.14□□□□□ -1.59
PRP18YGR006W RAD53P22216 821 aa5.14□□□□□ -1.59
PRP18YGR006W GSY1P23337 708 aa5.14□□□□□ -1.59
PRP18YGR006W PEX6P33760 1030 aa5.14□□□□□ -1.59
PRP18YGR006W EMC3P36039 253 aa5.14□□□□□ -1.59
PRP18YGR006W POL12P38121 705 aaPredicted RBP5.14□□□□□ -1.59
PRP18YGR006W ETP1P38748 585 aaKnown RBP5.14□□□□□ -1.59
PRP18YGR006W MAL11P53048 616 aa5.14□□□□□ -1.59
PRP18YGR006W YGR283CP53336 341 aaPredicted RBP5.14□□□□□ -1.59
PRP18YGR006W SNO2P53823 222 aa5.14□□□□□ -1.59
PRP18YGR006W VPS30Q02948 557 aa5.14□□□□□ -1.59
PRP18YGR006W ENV7Q12003 364 aa5.14□□□□□ -1.59
PRP18YGR006W MDM12Q92328 271 aa5.14□□□□□ -1.59
PRP18YGR006W DFG16Q99234 619 aa5.14□□□□□ -1.59
PRP18YGR006W HSF1P10961 833 aa5.13□□□□□ -1.59
PRP18YGR006W RFA1P22336 621 aaKnown RBP5.13□□□□□ -1.59
PRP18YGR006W SPC29P33419 253 aa5.13□□□□□ -1.59
PRP18YGR006W ZRG8P40021 1076 aa5.13□□□□□ -1.59
PRP18YGR006W ECL1P48235 211 aa5.13□□□□□ -1.59
PRP18YGR006W PSP2P50109 593 aaKnown RBP5.13□□□□□ -1.59
PRP18YGR006W NTG2Q08214 380 aa5.13□□□□□ -1.59
PRP18YGR006W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
PRP18YGR006W RPP2AP05319 106 aaKnown RBP5.12□□□□□ -1.59
PRP18YGR006W GYP8P43570 497 aa5.12□□□□□ -1.59
PRP18YGR006W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
PRP18YGR006W RAI1P53063 387 aaKnown RBP5.12□□□□□ -1.59
PRP18YGR006W YGR012WP53206 393 aa5.12□□□□□ -1.59
PRP18YGR006W PBP1P53297 722 aaKnown RBP5.12□□□□□ -1.59
PRP18YGR006W ATP25Q03153 612 aa5.12□□□□□ -1.59
PRP18YGR006W SGD1Q06132 899 aa5.12□□□□□ -1.59
PRP18YGR006W REH1Q06709 432 aa5.12□□□□□ -1.59
PRP18YGR006W NOP14Q99207 810 aaKnown RBP5.12□□□□□ -1.59
PRP18YGR006W GAL10P04397 699 aa5.11□□□□□ -1.59
PRP18YGR006W NOT3P06102 836 aaKnown RBP5.11□□□□□ -1.59
PRP18YGR006W ENA1P13587 1091 aa5.11□□□□□ -1.59
PRP18YGR006W SFP1P32432 683 aa5.11□□□□□ -1.59
PRP18YGR006W SRP101P32916 621 aa5.11□□□□□ -1.59
PRP18YGR006W DSS1P39112 969 aa5.11□□□□□ -1.59
PRP18YGR006W ENA2Q01896 1091 aa5.11□□□□□ -1.59
PRP18YGR006W YDR514CQ04408 483 aa5.11□□□□□ -1.59
PRP18YGR006W CDA1Q06702 301 aa5.11□□□□□ -1.59
PRP18YGR006W YDL177CQ12257 170 aa5.11□□□□□ -1.59
PRP18YGR006W ENA5Q12691 1091 aa5.11□□□□□ -1.59
PRP18YGR006W YGR161W-CQ3E744 92 aa5.11□□□□□ -1.59
PRP18YGR006W SRM1P21827 482 aa5.1□□□□□ -1.59
PRP18YGR006W MND2P40577 368 aa5.1□□□□□ -1.59
PRP18YGR006W NOG2P53742 486 aaKnown RBP5.1□□□□□ -1.59
PRP18YGR006W URA1P28272 314 aaPredicted RBP5.09□□□□□ -1.59
PRP18YGR006W STE13P33894 931 aa5.09□□□□□ -1.59
PRP18YGR006W ATG19P35193 415 aa5.09□□□□□ -1.59
PRP18YGR006W LAM1P38851 1228 aa5.09□□□□□ -1.59
PRP18YGR006W MRPL22P53881 309 aa5.09□□□□□ -1.59
PRP18YGR006W MET7Q08645 548 aa5.09□□□□□ -1.59
PRP18YGR006W RPS9AO13516 197 aaKnown RBP5.08□□□□□ -1.6
PRP18YGR006W VBA3P25594 458 aa5.08□□□□□ -1.6
PRP18YGR006W MTC2P34246 357 aa5.08□□□□□ -1.6
PRP18YGR006W LRG1P35688 1017 aa5.08□□□□□ -1.6
PRP18YGR006W POA1P38218 177 aa5.08□□□□□ -1.6
PRP18YGR006W YGL081WP53156 320 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms