RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C RRP14P36080 434 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C CRP1P38845 465 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C CTR9P89105 1077 aa1.66□□□□□ -2.14
SEC3YER008C MAP1Q01662 387 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SEC3YER008C MSH6Q03834 1242 aa1.66□□□□□ -2.14
SEC3YER008C SND1Q04007 877 aa1.66□□□□□ -2.14
SEC3YER008C HDA2Q06629 674 aa1.66□□□□□ -2.14
SEC3YER008C YDL176WQ12027 708 aa1.66□□□□□ -2.14
SEC3YER008C YPR071WQ12346 211 aa1.66□□□□□ -2.14
SEC3YER008C GEA2P39993 1459 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C ADE8P04161 214 aa1.66□□□□□ -2.14
SEC3YER008C PRP9P19736 530 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C VMA4P22203 233 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C SCT1P32784 759 aa1.66□□□□□ -2.14
SEC3YER008C QNS1P38795 714 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C GEM1P39722 662 aa1.66□□□□□ -2.14
SEC3YER008C SDH1Q00711 640 aa1.66□□□□□ -2.14
SEC3YER008C POB3Q04636 552 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C MPD2Q99316 277 aa1.66□□□□□ -2.14
SEC3YER008C TY1B-NL2Q99337 1749 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C PHO8P11491 566 aa1.66□□□□□ -2.14
SEC3YER008C ADP1P25371 1049 aa1.66□□□□□ -2.14
SEC3YER008C MRP8P35719 219 aa1.66□□□□□ -2.14
SEC3YER008C EXO5P38289 585 aa1.66□□□□□ -2.14
SEC3YER008C YBR184WP38299 523 aa1.66□□□□□ -2.14
SEC3YER008C ICP55P40051 511 aa1.66□□□□□ -2.14
SEC3YER008C MSH4P40965 878 aaPredicted RBP1.66□□□□□ -2.14
SEC3YER008C CIT3P43635 486 aa1.66□□□□□ -2.14
SEC3YER008C BUD9P53226 547 aa1.66□□□□□ -2.14
SEC3YER008C YPL034WQ03083 165 aa1.66□□□□□ -2.14
SEC3YER008C RSM24Q03976 319 aa1.66□□□□□ -2.14
SEC3YER008C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SEC3YER008C OSW2Q12202 724 aa1.66□□□□□ -2.14
SEC3YER008C VMR1P38735 1592 aa1.65□□□□□ -2.14
SEC3YER008C KIN2P13186 1147 aaKnown RBP1.65□□□□□ -2.14
SEC3YER008C DOM34P33309 386 aa1.65□□□□□ -2.14
SEC3YER008C ENP1P38333 483 aaKnown RBP1.65□□□□□ -2.14
SEC3YER008C RIM11P38615 370 aa1.65□□□□□ -2.14
SEC3YER008C SHR5P41912 237 aa1.65□□□□□ -2.14
SEC3YER008C YNR029CP53729 429 aaKnown RBP1.65□□□□□ -2.14
SEC3YER008C VPS72Q03388 795 aa1.65□□□□□ -2.14
SEC3YER008C RSA3Q05942 220 aaKnown RBP1.65□□□□□ -2.14
SEC3YER008C FLC1Q08967 793 aa1.65□□□□□ -2.14
SEC3YER008C TSC11P40061 1430 aa1.65□□□□□ -2.14
SEC3YER008C TRM3Q07527 1436 aa1.65□□□□□ -2.14
SEC3YER008C IML1P47170 1584 aa1.65□□□□□ -2.15
SEC3YER008C STI1P15705 589 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SEC3YER008C MKK2P32491 506 aa1.65□□□□□ -2.15
SEC3YER008C SMY2P32909 740 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C RER2P35196 286 aa1.65□□□□□ -2.15
SEC3YER008C RSP5P39940 809 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C POL5P39985 1022 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C BFA1P47113 574 aa1.65□□□□□ -2.15
SEC3YER008C RTA1P53047 317 aa1.65□□□□□ -2.15
SEC3YER008C ATG13Q06628 738 aa1.65□□□□□ -2.15
SEC3YER008C PUS7Q08647 676 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C TMA17Q12513 150 aa1.65□□□□□ -2.15
SEC3YER008C SPP41P38904 1435 aa1.65□□□□□ -2.15
SEC3YER008C SPS1P08458 490 aa1.65□□□□□ -2.15
SEC3YER008C MSB1P21339 1137 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C PIN4P34217 668 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SEC3YER008C VBA5P36172 582 aa1.65□□□□□ -2.15
SEC3YER008C DOT6P40059 670 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C ERP6P53198 216 aa1.65□□□□□ -2.15
SEC3YER008C PEX8P53248 589 aa1.65□□□□□ -2.15
SEC3YER008C TIF35Q04067 274 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C YOR378WQ08902 515 aa1.65□□□□□ -2.15
SEC3YER008C TY1A-NL1Q12391 440 aaKnown RBP1.65□□□□□ -2.15
SEC3YER008C PHR1P05066 565 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
SEC3YER008C CMP2P14747 604 aa1.64□□□□□ -2.15
SEC3YER008C RPL8AP17076 256 aaKnown RBP1.64□□□□□ -2.15
SEC3YER008C SEA4P38164 1038 aa1.64□□□□□ -2.15
SEC3YER008C MXR1P40029 184 aa1.64□□□□□ -2.15
SEC3YER008C NIT1P40447 199 aa1.64□□□□□ -2.15
SEC3YER008C GTF1P53260 183 aaPredicted RBP1.64□□□□□ -2.15
SEC3YER008C SIW14P53965 281 aa1.64□□□□□ -2.15
SEC3YER008C SUB1P54000 292 aaKnown RBP1.64□□□□□ -2.15
SEC3YER008C YDL121CQ07541 149 aa1.64□□□□□ -2.15
SEC3YER008C YIG1Q08956 461 aa1.64□□□□□ -2.15
SEC3YER008C RKM4Q12504 494 aa1.64□□□□□ -2.15
SEC3YER008C PIF1P07271 859 aa1.64□□□□□ -2.15
SEC3YER008C DBP5P20449 482 aaKnown RBP1.64□□□□□ -2.15
SEC3YER008C POL12P38121 705 aaPredicted RBP1.64□□□□□ -2.15
SEC3YER008C MCX1P38323 520 aaPredicted RBP1.64□□□□□ -2.15
SEC3YER008C RGD1P38339 666 aa1.64□□□□□ -2.15
SEC3YER008C NTG2Q08214 380 aa1.64□□□□□ -2.15
SEC3YER008C SVS1Q12254 260 aa1.64□□□□□ -2.15
SEC3YER008C SKI3P17883 1432 aaKnown RBP1.64□□□□□ -2.15
SEC3YER008C CIT1P00890 479 aa1.64□□□□□ -2.15
SEC3YER008C CAN1P04817 590 aa1.64□□□□□ -2.15
SEC3YER008C KAR1P11927 433 aa1.64□□□□□ -2.15
SEC3YER008C DAL3P32459 195 aa1.64□□□□□ -2.15
SEC3YER008C BET3P36149 193 aa1.64□□□□□ -2.15
SEC3YER008C SPF1P39986 1215 aaKnown RBP1.64□□□□□ -2.15
SEC3YER008C YNL034WP53963 612 aa1.64□□□□□ -2.15
SEC3YER008C YNL018CP53976 612 aa1.64□□□□□ -2.15
SEC3YER008C HOS3Q02959 697 aaKnown RBP1.64□□□□□ -2.15
SEC3YER008C YPL260WQ08977 551 aa1.64□□□□□ -2.15
SEC3YER008C YDR215CQ12240 137 aa1.64□□□□□ -2.15
SEC3YER008C TOP3P13099 656 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms