RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W GYP7P48365 746 aa4.1□□□□□ -1.75
SHS1YDL225W ALG12P53730 551 aa4.1□□□□□ -1.75
SHS1YDL225W BUL2Q03758 920 aaKnown RBP4.1□□□□□ -1.75
SHS1YDL225W RSM24Q03976 319 aa4.1□□□□□ -1.75
SHS1YDL225W OSW2Q12202 724 aa4.1□□□□□ -1.75
SHS1YDL225W KIN2P13186 1147 aaKnown RBP4.09□□□□□ -1.76
SHS1YDL225W THI4P32318 326 aa4.09□□□□□ -1.76
SHS1YDL225W REC104P33323 182 aa4.09□□□□□ -1.76
SHS1YDL225W RRP14P36080 434 aaKnown RBP4.09□□□□□ -1.76
SHS1YDL225W TOK1P40310 691 aa4.09□□□□□ -1.76
SHS1YDL225W IRC24P40580 263 aa4.09□□□□□ -1.76
SHS1YDL225W HSV2P50079 448 aaPredicted RBP4.09□□□□□ -1.76
SHS1YDL225W XYL2Q07993 356 aa4.09□□□□□ -1.76
SHS1YDL225W DFG16Q99234 619 aa4.09□□□□□ -1.76
SHS1YDL225W ETP1P38748 585 aaKnown RBP4.08□□□□□ -1.76
SHS1YDL225W YAP1801P38856 637 aa4.08□□□□□ -1.76
SHS1YDL225W YER158CP40095 573 aa4.08□□□□□ -1.76
SHS1YDL225W CCM1P48237 864 aaPredicted RBP4.08□□□□□ -1.76
SHS1YDL225W SFB2P53953 876 aa4.08□□□□□ -1.76
SHS1YDL225W FUN30P31380 1131 aa4.07□□□□□ -1.76
SHS1YDL225W YKR078WP36158 585 aaKnown RBP4.07□□□□□ -1.76
SHS1YDL225W ECM21P38167 1117 aaKnown RBP4.07□□□□□ -1.76
SHS1YDL225W GDH3P39708 457 aa4.07□□□□□ -1.76
SHS1YDL225W PRP43P53131 767 aaKnown RBP4.07□□□□□ -1.76
SHS1YDL225W ENV11P53246 860 aa4.07□□□□□ -1.76
SHS1YDL225W RIB2Q12362 591 aaKnown RBP4.07□□□□□ -1.76
SHS1YDL225W CYC1P00044 109 aaPredicted RBP4.06□□□□□ -1.76
SHS1YDL225W CDC48P25694 835 aaKnown RBP4.06□□□□□ -1.76
SHS1YDL225W MSC2Q03455 724 aa4.06□□□□□ -1.76
SHS1YDL225W YPR196WQ06595 470 aa4.06□□□□□ -1.76
SHS1YDL225W PHR1P05066 565 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
SHS1YDL225W CMP2P14747 604 aa4.06□□□□□ -1.76
SHS1YDL225W SRM1P21827 482 aa4.06□□□□□ -1.76
SHS1YDL225W YKE2P52553 114 aa4.06□□□□□ -1.76
SHS1YDL225W SIZ1Q04195 904 aa4.06□□□□□ -1.76
SHS1YDL225W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
SHS1YDL225W MSH2P25847 964 aa4.05□□□□□ -1.76
SHS1YDL225W LRG1P35688 1017 aa4.05□□□□□ -1.76
SHS1YDL225W BRN1P38170 754 aa4.05□□□□□ -1.76
SHS1YDL225W ALG2P43636 503 aa4.05□□□□□ -1.76
SHS1YDL225W MAL11P53048 616 aa4.05□□□□□ -1.76
SHS1YDL225W POB3Q04636 552 aaKnown RBP4.05□□□□□ -1.76
SHS1YDL225W YDL177CQ12257 170 aa4.05□□□□□ -1.76
SHS1YDL225W RPC82P32349 654 aa4.04□□□□□ -1.76
SHS1YDL225W SPC42P36094 363 aa4.04□□□□□ -1.76
SHS1YDL225W YBR238CP38330 731 aaKnown RBP4.04□□□□□ -1.76
SHS1YDL225W GAL10P04397 699 aa4.03□□□□□ -1.76
SHS1YDL225W ENA1P13587 1091 aa4.03□□□□□ -1.76
SHS1YDL225W RAD53P22216 821 aa4.03□□□□□ -1.76
SHS1YDL225W SEG2P34250 1132 aa4.03□□□□□ -1.76
SHS1YDL225W MNN1P39106 762 aa4.03□□□□□ -1.76
SHS1YDL225W NIT1P40447 199 aa4.03□□□□□ -1.76
SHS1YDL225W YGR283CP53336 341 aaPredicted RBP4.03□□□□□ -1.76
SHS1YDL225W DOS2P54858 310 aa4.03□□□□□ -1.76
SHS1YDL225W ENA2Q01896 1091 aa4.03□□□□□ -1.76
SHS1YDL225W ROT1Q03691 256 aa4.03□□□□□ -1.76
SHS1YDL225W ENV7Q12003 364 aa4.03□□□□□ -1.76
SHS1YDL225W ENA5Q12691 1091 aa4.03□□□□□ -1.76
SHS1YDL225W NOT3P06102 836 aaKnown RBP4.03□□□□□ -1.76
SHS1YDL225W ZRG8P40021 1076 aa4.03□□□□□ -1.76
SHS1YDL225W GYP8P43570 497 aa4.03□□□□□ -1.76
SHS1YDL225W YGR012WP53206 393 aa4.03□□□□□ -1.76
SHS1YDL225W SNO2P53823 222 aa4.03□□□□□ -1.76
SHS1YDL225W MRPL22P53881 309 aa4.03□□□□□ -1.76
SHS1YDL225W PLB2Q03674 706 aa4.03□□□□□ -1.76
SHS1YDL225W GAS1P22146 559 aaKnown RBP4.02□□□□□ -1.77
SHS1YDL225W RFA1P22336 621 aaKnown RBP4.02□□□□□ -1.77
SHS1YDL225W SRP101P32916 621 aa4.02□□□□□ -1.77
SHS1YDL225W SPC29P33419 253 aa4.02□□□□□ -1.77
SHS1YDL225W PEX6P33760 1030 aa4.02□□□□□ -1.77
SHS1YDL225W UBP5P39944 805 aa4.02□□□□□ -1.77
SHS1YDL225W NIT3P49954 291 aa4.02□□□□□ -1.77
SHS1YDL225W DAM1P53267 343 aa4.02□□□□□ -1.77
SHS1YDL225W UGO1Q03327 502 aa4.02□□□□□ -1.77
SHS1YDL225W SGD1Q06132 899 aa4.02□□□□□ -1.77
SHS1YDL225W MDM12Q92328 271 aa4.02□□□□□ -1.77
SHS1YDL225W MPH2P0CD99 609 aa4.01□□□□□ -1.77
SHS1YDL225W HSF1P10961 833 aa4.01□□□□□ -1.77
SHS1YDL225W LAM1P38851 1228 aa4.01□□□□□ -1.77
SHS1YDL225W CEP3P40969 608 aa4.01□□□□□ -1.77
SHS1YDL225W GTF1P53260 183 aaPredicted RBP4.01□□□□□ -1.77
SHS1YDL225W CDA1Q06702 301 aa4.01□□□□□ -1.77
SHS1YDL225W NTG2Q08214 380 aa4.01□□□□□ -1.77
SHS1YDL225W ELM1P32801 640 aa4□□□□□ -1.77
SHS1YDL225W EMC3P36039 253 aa4□□□□□ -1.77
SHS1YDL225W FPR3P38911 411 aaKnown RBP4□□□□□ -1.77
SHS1YDL225W DSS1P39112 969 aa4□□□□□ -1.77
SHS1YDL225W MEF2P39677 819 aa4□□□□□ -1.77
SHS1YDL225W MND2P40577 368 aa4□□□□□ -1.77
SHS1YDL225W RAI1P53063 387 aaKnown RBP4□□□□□ -1.77
SHS1YDL225W YDR514CQ04408 483 aa4□□□□□ -1.77
SHS1YDL225W UTP14Q04500 899 aaKnown RBP4□□□□□ -1.77
SHS1YDL225W DAL7P21826 554 aa4□□□□□ -1.77
SHS1YDL225W MEF1P25039 761 aa4□□□□□ -1.77
SHS1YDL225W RNQ1P25367 405 aa4□□□□□ -1.77
SHS1YDL225W STE13P33894 931 aa4□□□□□ -1.77
SHS1YDL225W GCV2P49095 1034 aa4□□□□□ -1.77
SHS1YDL225W PBP1P53297 722 aaKnown RBP4□□□□□ -1.77
SHS1YDL225W DNM1P54861 757 aa4□□□□□ -1.77
SHS1YDL225W ATP25Q03153 612 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms