RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	ATG19	P35193	415 aa		5.12	□□□□□ -1.59
SAF1	YBR280C	EPL1	P43572	832 aa		5.12	□□□□□ -1.59
SAF1	YBR280C	RET3	P53600	189 aa		5.12	□□□□□ -1.59
SAF1	YBR280C	HXT17	P53631	564 aa		5.12	□□□□□ -1.59
SAF1	YBR280C	PML39	Q03760	334 aa		5.12	□□□□□ -1.59
SAF1	YBR280C	YDR344C	Q05510	147 aa		5.12	□□□□□ -1.59
SAF1	YBR280C	ESC8	Q08119	714 aa		5.12	□□□□□ -1.59
SAF1	YBR280C	GLN3	P18494	730 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	RAM1	P22007	431 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	SWI4	P25302	1093 aa	Known RBP	5.11	□□□□□ -1.59
SAF1	YBR280C	FBP26	P32604	452 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	COY1	P34237	679 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	SEG2	P34250	1132 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	PCM1	P38628	557 aa	Known RBP	5.11	□□□□□ -1.59
SAF1	YBR280C	RIM4	P38741	713 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	FYV10	P40492	516 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	CCH1	P50077	2039 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	SPE1	P08432	466 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	SRD1	P09007	221 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	PRP22	P24384	1145 aa	Known RBP	5.11	□□□□□ -1.59
SAF1	YBR280C	BIO2	P32451	375 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	HEL1	P36113	551 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	PTC4	P38089	393 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	YEL023C	P39992	682 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	AVT1	P47082	602 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	YML083C	Q04526	418 aa		5.11	□□□□□ -1.59
SAF1	YBR280C	TRP2	P00899	507 aa	Known RBP	5.1	□□□□□ -1.59
SAF1	YBR280C	RAD27	P26793	382 aa		5.1	□□□□□ -1.59
SAF1	YBR280C	HXT13	P39924	564 aa		5.1	□□□□□ -1.59
SAF1	YBR280C	SPO22	P40511	975 aa		5.1	□□□□□ -1.59
SAF1	YBR280C	ULP2	P40537	1034 aa	Predicted RBP	5.1	□□□□□ -1.59
SAF1	YBR280C	KRI1	P42846	591 aa	Known RBP	5.1	□□□□□ -1.59
SAF1	YBR280C	TRS120	Q04183	1289 aa		5.1	□□□□□ -1.59
SAF1	YBR280C	YLH47	Q06493	454 aa		5.1	□□□□□ -1.59
SAF1	YBR280C	IRA2	P19158	3079 aa		5.1	□□□□□ -1.59
SAF1	YBR280C	COX4	P04037	155 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	TOM70	P07213	617 aa	Known RBP	5.09	□□□□□ -1.59
SAF1	YBR280C	CIT2	P08679	460 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	CUP1-1	P0CX80	61 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	CUP1-2	P0CX81	61 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	HMG2	P12684	1045 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	THR4	P16120	514 aa	Known RBP	5.09	□□□□□ -1.59
SAF1	YBR280C	HCM1	P25364	564 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	RPT1	P33299	467 aa	Known RBP	5.09	□□□□□ -1.59
SAF1	YBR280C	MNR2	P35724	969 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	OPY1	P38271	328 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	RPN10	P38886	268 aa	Known RBP	5.09	□□□□□ -1.59
SAF1	YBR280C	RPN3	P40016	523 aa	Known RBP	5.09	□□□□□ -1.59
SAF1	YBR280C	PGA2	P53903	129 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	NAF1	P53919	492 aa	Known RBP	5.09	□□□□□ -1.59
SAF1	YBR280C	ARP5	P53946	755 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	GCR2	Q01722	534 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	MFB1	Q04922	465 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	SLK19	Q08581	821 aa	Known RBP	5.09	□□□□□ -1.59
SAF1	YBR280C	PLP2	Q12017	286 aa		5.09	□□□□□ -1.59
SAF1	YBR280C	HIS5	P07172	385 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	RPL40A	P0CH08	128 aa	Known RBP	5.09	□□□□□ -1.6
SAF1	YBR280C	RPL40B	P0CH09	128 aa	Known RBP	5.09	□□□□□ -1.6
SAF1	YBR280C	MAS1	P10507	462 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	TCP1	P12612	559 aa	Known RBP	5.09	□□□□□ -1.6
SAF1	YBR280C	DPH2	P32461	534 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	KTR4	P38131	464 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	ATG32	P40458	529 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	NUT1	P53114	1132 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	MNP1	P53163	194 aa	Predicted RBP	5.09	□□□□□ -1.6
SAF1	YBR280C	RTT102	P53330	157 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	RCR2	Q03446	210 aa	Known RBP	5.09	□□□□□ -1.6
SAF1	YBR280C	OSW2	Q12202	724 aa		5.09	□□□□□ -1.6
SAF1	YBR280C	SEN1	Q00416	2231 aa	Known RBP	5.08	□□□□□ -1.6
SAF1	YBR280C	HAP2	P06774	265 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	ATP1	P07251	545 aa	Known RBP	5.08	□□□□□ -1.6
SAF1	YBR280C	VPS1	P21576	704 aa	Known RBP	5.08	□□□□□ -1.6
SAF1	YBR280C	SGF29	P25554	259 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	RAD54	P32863	898 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	MRX3	P38172	270 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	VID24	P38263	362 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	ISM1	P48526	1002 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	YKE2	P52553	114 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	YNL146W	P53906	100 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	NCS2	P53923	493 aa	Predicted RBP	5.08	□□□□□ -1.6
SAF1	YBR280C	YDR090C	Q03193	310 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	SDH5	Q08230	162 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	DNL4	Q08387	944 aa	Predicted RBP	5.08	□□□□□ -1.6
SAF1	YBR280C	IES4	Q08561	116 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	CEX1	Q12453	761 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	ZPS1	Q12512	249 aa		5.08	□□□□□ -1.6
SAF1	YBR280C	MATALPHA2	P0CY08	210 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	HMLALPHA2	P0CY09	210 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	PDE1	P22434	369 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	PGS1	P25578	521 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	SKG6	P32900	734 aa	Predicted RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	HMT1	P38074	348 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	ERC1	P38767	581 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	STT3	P39007	718 aa	Known RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	AIM9	P40053	627 aa	Known RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	YER186C	P40101	306 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	ALG11	P53954	548 aa	Known RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	LEE1	Q02799	301 aa	Known RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	PEX19	Q07418	342 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	REC8	Q12188	680 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms