RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C RPC17P47076 161 aa5.3□□□□□ -1.56
ROT2YBR229C PGA2P53903 129 aa5.3□□□□□ -1.56
ROT2YBR229C AAD16Q02895 342 aa5.3□□□□□ -1.56
ROT2YBR229C DIG1Q03063 452 aaKnown RBP5.3□□□□□ -1.56
ROT2YBR229C YLR297WQ05899 129 aa5.3□□□□□ -1.56
ROT2YBR229C YPL277CQ08989 487 aa5.3□□□□□ -1.56
ROT2YBR229C ZRT2Q12436 422 aa5.3□□□□□ -1.56
ROT2YBR229C TRP2P00899 507 aaKnown RBP5.3□□□□□ -1.56
ROT2YBR229C ILV1P00927 576 aaKnown RBP5.3□□□□□ -1.56
ROT2YBR229C MRF1P30775 413 aaPredicted RBP5.3□□□□□ -1.56
ROT2YBR229C GLN1P32288 370 aaKnown RBP5.3□□□□□ -1.56
ROT2YBR229C YKL222CP35995 705 aa5.3□□□□□ -1.56
ROT2YBR229C SUL1P38359 859 aa5.3□□□□□ -1.56
ROT2YBR229C COS5P47187 383 aa5.3□□□□□ -1.56
ROT2YBR229C SUE1Q06524 206 aa5.3□□□□□ -1.56
ROT2YBR229C RPB2P08518 1224 aaKnown RBP5.29□□□□□ -1.56
ROT2YBR229C PCK1P10963 549 aa5.29□□□□□ -1.56
ROT2YBR229C PYC1P11154 1178 aaKnown RBP5.29□□□□□ -1.56
ROT2YBR229C YNL320WP42840 284 aa5.29□□□□□ -1.56
ROT2YBR229C ESBP6P53918 673 aa5.29□□□□□ -1.56
ROT2YBR229C GIR2Q03768 265 aaPredicted RBP5.29□□□□□ -1.56
ROT2YBR229C DPL1Q05567 589 aa5.29□□□□□ -1.56
ROT2YBR229C ARG4P04076 463 aaPredicted RBP5.29□□□□□ -1.56
ROT2YBR229C PRP16P15938 1071 aaPredicted RBP5.29□□□□□ -1.56
ROT2YBR229C MCD4P36051 919 aa5.29□□□□□ -1.56
ROT2YBR229C BRE2P43132 505 aa5.29□□□□□ -1.56
ROT2YBR229C SNU71P53207 620 aaKnown RBP5.29□□□□□ -1.56
ROT2YBR229C YNL035CP53962 389 aaKnown RBP5.29□□□□□ -1.56
ROT2YBR229C YMR018WQ04364 514 aa5.29□□□□□ -1.56
ROT2YBR229C CUR1Q06469 252 aa5.29□□□□□ -1.56
ROT2YBR229C UTP4Q06679 776 aaKnown RBP5.29□□□□□ -1.56
ROT2YBR229C PRE10P21242 288 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
ROT2YBR229C BCH2P36122 765 aa5.28□□□□□ -1.56
ROT2YBR229C MMS21P38632 267 aa5.28□□□□□ -1.56
ROT2YBR229C ORC4P54791 529 aa5.28□□□□□ -1.56
ROT2YBR229C UTP14Q04500 899 aaKnown RBP5.28□□□□□ -1.56
ROT2YBR229C CSR1Q06705 408 aaKnown RBP5.28□□□□□ -1.56
ROT2YBR229C SPO21Q12411 609 aa5.28□□□□□ -1.56
ROT2YBR229C ADP1P25371 1049 aa5.28□□□□□ -1.56
ROT2YBR229C BLI1P35727 113 aa5.28□□□□□ -1.56
ROT2YBR229C RIX1P38883 763 aaPredicted RBP5.28□□□□□ -1.56
ROT2YBR229C YML119WQ03208 357 aa5.28□□□□□ -1.56
ROT2YBR229C RLP24Q07915 199 aaKnown RBP5.28□□□□□ -1.56
ROT2YBR229C SDH5Q08230 162 aa5.28□□□□□ -1.56
ROT2YBR229C OXR1Q08952 273 aa5.28□□□□□ -1.56
ROT2YBR229C PRP9P19736 530 aaKnown RBP5.27□□□□□ -1.57
ROT2YBR229C UGA4P32837 571 aa5.27□□□□□ -1.57
ROT2YBR229C YBL028CP38202 106 aa5.27□□□□□ -1.57
ROT2YBR229C MRX1P40050 688 aa5.27□□□□□ -1.57
ROT2YBR229C FMS1P50264 508 aa5.27□□□□□ -1.57
ROT2YBR229C RPL22BP56628 122 aaKnown RBP5.27□□□□□ -1.57
ROT2YBR229C AIM41Q12032 185 aa5.27□□□□□ -1.57
ROT2YBR229C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57 RIP-Chip
ROT2YBR229C ARD1P07347 238 aaPredicted RBP5.27□□□□□ -1.57
ROT2YBR229C PHO8P11491 566 aa5.27□□□□□ -1.57
ROT2YBR229C PGM1P33401 570 aaKnown RBP5.27□□□□□ -1.57
ROT2YBR229C SQT1P35184 431 aa5.27□□□□□ -1.57
ROT2YBR229C OAF3P36023 863 aa5.27□□□□□ -1.57
ROT2YBR229C YBL086CP38177 466 aa5.27□□□□□ -1.57
ROT2YBR229C NDT80P38830 627 aa5.27□□□□□ -1.57
ROT2YBR229C CCT2P39076 527 aaKnown RBP5.27□□□□□ -1.57
ROT2YBR229C UTP7P40055 554 aaKnown RBP5.27□□□□□ -1.57
ROT2YBR229C MTC3P53077 123 aa5.27□□□□□ -1.57
ROT2YBR229C YMR187CQ03236 431 aa5.27□□□□□ -1.57
ROT2YBR229C TDA9Q04545 1251 aa5.27□□□□□ -1.57
ROT2YBR229C YDR338CQ05497 695 aa5.27□□□□□ -1.57
ROT2YBR229C SNF1P06782 633 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C SRD1P09007 221 aa5.26□□□□□ -1.57
ROT2YBR229C SWI6P09959 803 aa5.26□□□□□ -1.57
ROT2YBR229C ADH4P10127 382 aa5.26□□□□□ -1.57
ROT2YBR229C PRP22P24384 1145 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C YCR051WP25631 222 aa5.26□□□□□ -1.57
ROT2YBR229C NAM7P30771 971 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C AFG2P32794 780 aa5.26□□□□□ -1.57
ROT2YBR229C LOS1P33418 1100 aaPredicted RBP5.26□□□□□ -1.57
ROT2YBR229C SAK1P38990 1142 aa5.26□□□□□ -1.57
ROT2YBR229C TIF4631P39935 952 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C PSY2P40164 858 aa5.26□□□□□ -1.57
ROT2YBR229C SAP185P40856 1058 aa5.26□□□□□ -1.57
ROT2YBR229C SOL4P53315 255 aa5.26□□□□□ -1.57
ROT2YBR229C CNM67P53865 581 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C ARP6Q12509 438 aa5.26□□□□□ -1.57
ROT2YBR229C YLR462WO13556 202 aa5.26□□□□□ -1.57
ROT2YBR229C PMR1P13586 950 aa5.26□□□□□ -1.57
ROT2YBR229C SEC21P32074 935 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C YME1P32795 747 aa5.26□□□□□ -1.57
ROT2YBR229C YEL1P34225 687 aa5.26□□□□□ -1.57
ROT2YBR229C YKL050CP35736 922 aa5.26□□□□□ -1.57
ROT2YBR229C PGM2P37012 569 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C YHL049CP38722 271 aa5.26□□□□□ -1.57
ROT2YBR229C YEL075CP39972 122 aa5.26□□□□□ -1.57
ROT2YBR229C LCP5P40079 357 aaPredicted RBP5.26□□□□□ -1.57
ROT2YBR229C YER189WP40104 122 aa5.26□□□□□ -1.57
ROT2YBR229C GPD2P41911 440 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C YFL064CP43540 174 aa5.26□□□□□ -1.57
ROT2YBR229C RIM8P53179 542 aa5.26□□□□□ -1.57
ROT2YBR229C JJJ1P53863 590 aa5.26□□□□□ -1.57
ROT2YBR229C SEN54Q02825 467 aaPredicted RBP5.26□□□□□ -1.57
ROT2YBR229C PIG1Q06216 648 aa5.26□□□□□ -1.57
ROT2YBR229C LAP2Q10740 671 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms