RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	ESC8	Q08119	714 aa		3.01	□□□□□ -1.93
NCL1	YBL024W	SVS1	Q12254	260 aa		3.01	□□□□□ -1.93
NCL1	YBL024W	RPL11B	Q3E757	174 aa	Predicted RBP	3.01	□□□□□ -1.93
NCL1	YBL024W	CYC1	P00044	109 aa	Predicted RBP	3	□□□□□ -1.93
NCL1	YBL024W	SRM1	P21827	482 aa		3	□□□□□ -1.93
NCL1	YBL024W	TOD6	P34219	525 aa		3	□□□□□ -1.93
NCL1	YBL024W	GDH3	P39708	457 aa		3	□□□□□ -1.93
NCL1	YBL024W	MXR1	P40029	184 aa		3	□□□□□ -1.93
NCL1	YBL024W	YPL277C	Q08989	487 aa		3	□□□□□ -1.93
NCL1	YBL024W	RPL8A	P17076	256 aa	Known RBP	3	□□□□□ -1.93
NCL1	YBL024W	APL1	P27351	700 aa		3	□□□□□ -1.93
NCL1	YBL024W	AAR2	P32357	355 aa	Predicted RBP	3	□□□□□ -1.93
NCL1	YBL024W	UBP12	P39538	1254 aa		3	□□□□□ -1.93
NCL1	YBL024W	YFL054C	P43549	646 aa		3	□□□□□ -1.93
NCL1	YBL024W	SPT20	P50875	604 aa		3	□□□□□ -1.93
NCL1	YBL024W	DUS3	Q06053	668 aa	Known RBP	3	□□□□□ -1.93
NCL1	YBL024W	ACM1	Q08981	209 aa		3	□□□□□ -1.93
NCL1	YBL024W	TOM70	P07213	617 aa	Known RBP	2.99	□□□□□ -1.93
NCL1	YBL024W	CMP2	P14747	604 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	MSD1	P15179	658 aa	Known RBP	2.99	□□□□□ -1.93
NCL1	YBL024W	LAM1	P38851	1228 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	UBP6	P43593	499 aa	Known RBP	2.99	□□□□□ -1.93
NCL1	YBL024W	ZDS1	P50111	915 aa	Known RBP	2.99	□□□□□ -1.93
NCL1	YBL024W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
NCL1	YBL024W	YPR071W	Q12346	211 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	ADR1	P07248	1323 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	MEF1	P25039	761 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	CDC11	P32458	415 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	AFR1	P33304	620 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	THI80	P35202	319 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	UGA2	P38067	497 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	ERT1	P38140	529 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	CRP1	P38845	465 aa	Known RBP	2.99	□□□□□ -1.93
NCL1	YBL024W	GEM1	P39722	662 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	SIT1	P39980	628 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	PBP1	P53297	722 aa	Known RBP	2.99	□□□□□ -1.93
NCL1	YBL024W	TFB2	Q02939	513 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	UGO1	Q03327	502 aa		2.99	□□□□□ -1.93
NCL1	YBL024W	YLR358C	O13565	187 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	SSB1	P11484	613 aa	Known RBP	2.98	□□□□□ -1.93
NCL1	YBL024W	YCR015C	P25616	317 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	PPH3	P32345	308 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	DOM34	P33309	386 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	SLA2	P33338	968 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	PEX6	P33760	1030 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	YKL151C	P36059	337 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	PET10	P36139	283 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	FLR1	P38124	548 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	GIP4	P39732	760 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	YEN1	P40028	759 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	SSB2	P40150	613 aa	Known RBP	2.98	□□□□□ -1.93
NCL1	YBL024W	YGL081W	P53156	320 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	YNR029C	P53729	429 aa	Known RBP	2.98	□□□□□ -1.93
NCL1	YBL024W	GCN5	Q03330	439 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	ROT1	Q03691	256 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	BUL2	Q03758	920 aa	Known RBP	2.98	□□□□□ -1.93
NCL1	YBL024W	ATG13	Q06628	738 aa		2.98	□□□□□ -1.93
NCL1	YBL024W	GAL10	P04397	699 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	TOM20	P35180	183 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	MEF2	P39677	819 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	RRT14	P40470	206 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	TPO2	P53283	614 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	HRQ1	Q05549	1077 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
NCL1	YBL024W	MDM12	Q92328	271 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	NPP1	P25353	742 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	CDC12	P32468	407 aa	Known RBP	2.97	□□□□□ -1.93
NCL1	YBL024W	ABZ1	P37254	787 aa	Predicted RBP	2.97	□□□□□ -1.93
NCL1	YBL024W	YRO2	P38079	344 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	YDR132C	Q03900	495 aa		2.97	□□□□□ -1.93
NCL1	YBL024W	BI4	P03879	638 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	SFP1	P32432	683 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	SAH1	P39954	449 aa	Known RBP	2.96	□□□□□ -1.94
NCL1	YBL024W	TOK1	P40310	691 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	ATG36	P46983	293 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	SRP1	Q02821	542 aa	Known RBP	2.96	□□□□□ -1.94
NCL1	YBL024W	LCD1	Q04377	747 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	RXT3	Q07458	294 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	ADE8	P04161	214 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
NCL1	YBL024W	ACE2	P21192	770 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
NCL1	YBL024W	RAD53	P22216	821 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	DSS1	P39112	969 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	ALG2	P43636	503 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	YJR008W	P47085	338 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	YNL193W	P53870	558 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	CLU1	Q03690	1277 aa	Known RBP	2.96	□□□□□ -1.94
NCL1	YBL024W	SIZ1	Q04195	904 aa		2.96	□□□□□ -1.94
NCL1	YBL024W	VBA3	P25594	458 aa		2.95	□□□□□ -1.94
NCL1	YBL024W	TAF1	P46677	1066 aa		2.95	□□□□□ -1.94
NCL1	YBL024W	HLJ1	P48353	224 aa		2.95	□□□□□ -1.94
NCL1	YBL024W	YLR001C	Q07895	862 aa		2.95	□□□□□ -1.94
NCL1	YBL024W	GPB1	Q08886	897 aa		2.95	□□□□□ -1.94
NCL1	YBL024W	OSW2	Q12202	724 aa		2.95	□□□□□ -1.94
NCL1	YBL024W	CDC9	P04819	755 aa		2.94	□□□□□ -1.94
NCL1	YBL024W	RPP2A	P05319	106 aa	Known RBP	2.94	□□□□□ -1.94
NCL1	YBL024W	SPC29	P33419	253 aa		2.94	□□□□□ -1.94
NCL1	YBL024W	TSL1	P38427	1098 aa	Known RBP	2.94	□□□□□ -1.94
NCL1	YBL024W	NPP2	P39997	493 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 520.2 ms