RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 TOP2AP11388 1531 aaKnown RBP10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 AMPD3Q01432 767 aa10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 SRPK1Q96SB4 655 aaKnown RBP10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 PRKAB1Q9Y478 270 aa10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 PMM1Q92871 262 aa10.09□□□□□ -0.79
SMARCA2-243ENST00000635590 ZNF408Q9H9D4 720 aa10.09□□□□□ -0.79
SMARCA2-243ENST00000635590 SPG7Q9UQ90 795 aa10.09□□□□□ -0.79
SMARCA2-243ENST00000635590 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
SMARCA2-243ENST00000635590 PSEN2P49810 448 aa10.08□□□□□ -0.8
SMARCA2-243ENST00000635590 EPHA4P54764 986 aa10.08□□□□□ -0.8
SMARCA2-243ENST00000635590 TAF7LQ5H9L4 462 aa10.08□□□□□ -0.8
SMARCA2-243ENST00000635590 SMC5Q8IY18 1101 aa10.08□□□□□ -0.8
SMARCA2-243ENST00000635590 ABTB2Q8N961 1025 aa10.08□□□□□ -0.8
SMARCA2-243ENST00000635590 USP31Q70CQ4 1352 aa10.08□□□□□ -0.8
SMARCA2-243ENST00000635590 PPP1R12AO14974 1030 aaPredicted RBP10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 MYCP01106 439 aaPredicted RBP10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 ORC1Q13415 861 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 RASGRP4Q8TDF6 673 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 LRFN2Q9ULH4 789 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 ARAP1Q96P48 1450 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 ABCC8Q09428 1581 aa10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 QTRT2Q9H974 415 aaKnown RBP10.07□□□□□ -0.8
SMARCA2-243ENST00000635590 TOPBP1Q92547 1522 aa10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 OPLAHO14841 1288 aa10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 SCNN1DP51172 638 aa10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 MSS51Q4VC12 460 aa10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 MEI1Q5TIA1 1274 aa10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 SLC10A4Q96EP9 437 aa10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 SIRPGQ9P1W8 387 aa10.06□□□□□ -0.8
SMARCA2-243ENST00000635590 EIF1AYO14602 144 aaKnown RBP10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 PPP1R12BO60237 982 aaPredicted RBP10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 SCTRP47872 440 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 DNM1Q05193 864 aaKnown RBP10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 FMNL3Q8IVF7 1028 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 CCDC146Q8IYE0 955 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 PRDM2Q13029 1718 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 BACH1O14867 736 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 USP5P45974 858 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 MMP16P51512 607 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 IRX6P78412 446 aaPredicted RBP10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 SNTG2Q9NY99 539 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 PCDH10Q9P2E7 1040 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 PRR12Q9ULL5 1215 aa10.05□□□□□ -0.8
SMARCA2-243ENST00000635590 PDGFRBP09619 1106 aa10.04□□□□□ -0.8
SMARCA2-243ENST00000635590 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-243ENST00000635590 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
SMARCA2-243ENST00000635590 C2orf49Q9BVC5 232 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-243ENST00000635590 SLC4A5Q9BY07 1137 aa10.04□□□□□ -0.8
SMARCA2-243ENST00000635590 COPRSQ9NQ92 184 aa10.04□□□□□ -0.8
SMARCA2-243ENST00000635590 EIF4G3O43432 1585 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 HAX1O00165 279 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 GDF10P55107 478 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 PTCRAQ6ISU1 281 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 ERMP1Q7Z2K6 904 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 LAPTM4BQ86VI4 370 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 JDP2Q8WYK2 163 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 EDEM1Q92611 657 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 SLKQ9H2G2 1235 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 PRDM9Q9NQV7 894 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 CDC45O75419 566 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 PDGFAP04085 211 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 TBX4P57082 545 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 NFX1Q12986 1120 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 CBLBQ13191 982 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 RASA3Q14644 834 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 TAF1CQ15572 869 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 C4orf48Q5BLP8 95 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 ANKS3Q6ZW76 656 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 C12orf49Q9H741 205 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 FANCLQ9NW38 375 aa10.03□□□□□ -0.8
SMARCA2-243ENST00000635590 AQRO60306 1485 aaKnown RBP eCLIP10.02□□□□□ -0.8
SMARCA2-243ENST00000635590 FAM221BA6H8Z2 402 aa10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 WASLO00401 505 aaPredicted RBP10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 NR1I2O75469 434 aa10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 ETFBP38117 255 aa10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 TBCELQ5QJ74 424 aa10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 ZFRQ96KR1 1074 aaKnown RBP10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
SMARCA2-243ENST00000635590 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 CHMP4BP1P59074 171 aa10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 BPHLQ86WA6 291 aaPredicted RBP10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 MYO19Q96H55 970 aa10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 DEPDC7Q96QD5 511 aa10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 TRIM55Q9BYV6 548 aa10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 OSBPL7Q9BZF2 842 aa10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 CHD1O14646 1710 aa10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 CCDC88BA6NC98 1476 aa10.01□□□□□ -0.81
SMARCA2-243ENST00000635590 KLF4O43474 513 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 AGERQ15109 404 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
SMARCA2-243ENST00000635590 STAG2Q8N3U4 1231 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms