RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 GJD4Q96KN9 370 aaPredicted RBP8.21□□□□□ -1.09
CUL3-216ENST00000617432 NIFKQ9BYG3 293 aaKnown RBP8.21□□□□□ -1.09
CUL3-216ENST00000617432 KRTAP4-7Q9BYR0 210 aa8.21□□□□□ -1.09
CUL3-216ENST00000617432 ETNK1Q9HBU6 452 aa8.21□□□□□ -1.09
CUL3-216ENST00000617432 FGD5Q6ZNL6 1462 aa8.21□□□□□ -1.1
CUL3-216ENST00000617432 M0R082 166 aa8.2□□□□□ -1.1
CUL3-216ENST00000617432 PAX4O43316 350 aa8.2□□□□□ -1.1
CUL3-216ENST00000617432 ZNF417Q8TAU3 575 aa8.2□□□□□ -1.1
CUL3-216ENST00000617432 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
CUL3-216ENST00000617432 ZNF587Q96SQ5 575 aaPredicted RBP8.2□□□□□ -1.1
CUL3-216ENST00000617432 AQRO60306 1485 aaKnown RBP eCLIP8.2□□□□□ -1.1
CUL3-216ENST00000617432 ADARB2-AS1A8MUL3 147 aa8.2□□□□□ -1.1
CUL3-216ENST00000617432 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.13e-6■□□□□ 8.1
CUL3-216ENST00000617432 ADGRE1Q14246 886 aa8.2□□□□□ -1.1
CUL3-216ENST00000617432 LCE1DQ5T752 114 aa8.19□□□□□ -1.1
CUL3-216ENST00000617432 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
CUL3-216ENST00000617432 SYT9Q86SS6 491 aa8.19□□□□□ -1.1
CUL3-216ENST00000617432 ABCC8Q09428 1581 aa8.18□□□□□ -1.1
CUL3-216ENST00000617432 SIN3BO75182 1162 aa8.18□□□□□ -1.1
CUL3-216ENST00000617432 ELNP15502 786 aa8.18□□□□□ -1.1
CUL3-216ENST00000617432 USP4Q13107 963 aa8.18□□□□□ -1.1
CUL3-216ENST00000617432 NBPF1Q3BBV0 1214 aa8.18□□□□□ -1.1
CUL3-216ENST00000617432 TXNRD3Q86VQ6 643 aa8.18□□□□□ -1.1
CUL3-216ENST00000617432 GJA3Q9Y6H8 435 aa8.18□□□□□ -1.1
CUL3-216ENST00000617432 COL17A1Q9UMD9 1497 aaPredicted RBP8.18□□□□□ -1.1
CUL3-216ENST00000617432 EFSO43281 561 aa8.17□□□□□ -1.1
CUL3-216ENST00000617432 TATP17735 454 aaPredicted RBP8.17□□□□□ -1.1
CUL3-216ENST00000617432 MBTPS1Q14703 1052 aa8.17□□□□□ -1.1
CUL3-216ENST00000617432 MICALL1Q8N3F8 863 aa8.17□□□□□ -1.1
CUL3-216ENST00000617432 ZIC5Q96T25 663 aa8.17□□□□□ -1.1
CUL3-216ENST00000617432 FAM117AQ9C073 453 aa8.17□□□□□ -1.1
CUL3-216ENST00000617432 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
CUL3-216ENST00000617432 CEP126Q9P2H0 1117 aa8.17□□□□□ -1.1
CUL3-216ENST00000617432 TDRD9Q8NDG6 1382 aaKnown RBP8.16□□□□□ -1.1
CUL3-216ENST00000617432 NID1P14543 1247 aa8.16□□□□□ -1.1
CUL3-216ENST00000617432 ZDHHC3Q9NYG2 299 aa8.16□□□□□ -1.1
CUL3-216ENST00000617432 STARD13Q9Y3M8 1113 aa8.16□□□□□ -1.1
CUL3-216ENST00000617432 SOGA1O94964 1423 aa8.16□□□□□ -1.1
CUL3-216ENST00000617432 WDR97A6NE52 1622 aa8.16□□□□□ -1.1
CUL3-216ENST00000617432 ARID1BQ8NFD5 2236 aaPredicted RBP8.16□□□□□ -1.1
CUL3-216ENST00000617432 CHD1O14646 1710 aa8.15□□□□□ -1.1
CUL3-216ENST00000617432 STAU1O95793 577 aaKnown RBP8.15□□□□□ -1.1
CUL3-216ENST00000617432 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
CUL3-216ENST00000617432 FMNL2Q96PY5 1086 aa8.15□□□□□ -1.1
CUL3-216ENST00000617432 RNF112Q9ULX5 631 aa8.15□□□□□ -1.1
CUL3-216ENST00000617432 SYNJ1O43426 1573 aa8.15□□□□□ -1.1
CUL3-216ENST00000617432 ALBP02768 609 aa8.14□□□□□ -1.11
CUL3-216ENST00000617432 SELPP16109 830 aa8.14□□□□□ -1.11
CUL3-216ENST00000617432 TNFRSF25Q93038 417 aa8.14□□□□□ -1.11
CUL3-216ENST00000617432 TP53INP1Q96A56 240 aa8.14□□□□□ -1.11
CUL3-216ENST00000617432 LENG1Q96BZ8 264 aaPredicted RBP8.14□□□□□ -1.11
CUL3-216ENST00000617432 INHAP05111 366 aa8.13□□□□□ -1.11
CUL3-216ENST00000617432 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
CUL3-216ENST00000617432 KDM4CQ9H3R0 1056 aa8.13□□□□□ -1.11
CUL3-216ENST00000617432 SNAPC4Q5SXM2 1469 aa8.13□□□□□ -1.11
CUL3-216ENST00000617432 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
CUL3-216ENST00000617432 SMTNP53814 917 aa8.12□□□□□ -1.11
CUL3-216ENST00000617432 SIRT1Q96EB6 747 aa8.12□□□□□ -1.11
CUL3-216ENST00000617432 DOLKQ9UPQ8 538 aa8.12□□□□□ -1.11
CUL3-216ENST00000617432 SCNN1DP51172 638 aa8.11□□□□□ -1.11
CUL3-216ENST00000617432 ZNF295-AS1Q8N0V1 137 aa8.11□□□□□ -1.11
CUL3-216ENST00000617432 SSBP4Q9BWG4 385 aaPredicted RBP8.11□□□□□ -1.11
CUL3-216ENST00000617432 RIMBP3CA6NJZ7 1639 aa8.1□□□□□ -1.11
CUL3-216ENST00000617432 RIMBP3BA6NNM3 1639 aa8.1□□□□□ -1.11
CUL3-216ENST00000617432 RIMBP3Q9UFD9 1639 aa8.1□□□□□ -1.11
CUL3-216ENST00000617432 BIVM-ERCC5R4GMW8 1640 aa8.1□□□□□ -1.11
CUL3-216ENST00000617432 PBRM1Q86U86 1689 aa8.1□□□□□ -1.11
CUL3-216ENST00000617432 GDF10P55107 478 aa8.1□□□□□ -1.11
CUL3-216ENST00000617432 C20orf204Q6ZNR8 217 aa8.1□□□□□ -1.11
CUL3-216ENST00000617432 ABCA5Q8WWZ7 1642 aa8.09□□□□□ -1.11
CUL3-216ENST00000617432 A0A0A0MRY4 1105 aa8.09□□□□□ -1.11
CUL3-216ENST00000617432 CDK2AP1O14519 115 aa8.09□□□□□ -1.11
CUL3-216ENST00000617432 TSGA10IPQ3SY00 556 aa8.09□□□□□ -1.11
CUL3-216ENST00000617432 BICDL1Q6ZP65 573 aa8.09□□□□□ -1.11
CUL3-216ENST00000617432 TOP2BQ02880 1626 aa8.09□□□□□ -1.11
CUL3-216ENST00000617432 WRNQ14191 1432 aaPredicted RBP eCLIP8.09□□□□□ -1.12
CUL3-216ENST00000617432 ADH7P40394 386 aa8.08□□□□□ -1.12
CUL3-216ENST00000617432 RAC1P63000 192 aa8.08□□□□□ -1.12
CUL3-216ENST00000617432 PHTF2Q8N3S3 785 aa8.08□□□□□ -1.12
CUL3-216ENST00000617432 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
CUL3-216ENST00000617432 ABCA10Q8WWZ4 1543 aa8.08□□□□□ -1.12
CUL3-216ENST00000617432 ARHGEF11O15085 1522 aa8.07□□□□□ -1.12
CUL3-216ENST00000617432 LILRB5O75023 590 aa8.07□□□□□ -1.12
CUL3-216ENST00000617432 GRIN2BQ13224 1484 aa8.07□□□□□ -1.12
CUL3-216ENST00000617432 GAPVD1Q14C86 1478 aa8.07□□□□□ -1.12
CUL3-216ENST00000617432 GPR37L1O60883 481 aa8.06□□□□□ -1.12
CUL3-216ENST00000617432 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
CUL3-216ENST00000617432 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
CUL3-216ENST00000617432 SLC4A9Q96Q91 983 aa8.06□□□□□ -1.12
CUL3-216ENST00000617432 PCMTD2Q9NV79 361 aa8.06□□□□□ -1.12
CUL3-216ENST00000617432 CABP1Q9NZU7 370 aa8.06□□□□□ -1.12
CUL3-216ENST00000617432 IQSEC3Q9UPP2 1182 aaPredicted RBP8.06□□□□□ -1.12
CUL3-216ENST00000617432 SLC30A3Q99726 388 aa8.05□□□□□ -1.12
CUL3-216ENST00000617432 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
CUL3-216ENST00000617432 SOCS7O14512 581 aa8.04□□□□□ -1.12
CUL3-216ENST00000617432 FZD5Q13467 585 aa8.04□□□□□ -1.12
CUL3-216ENST00000617432 MTFR1Q15390 333 aa8.04□□□□□ -1.12
CUL3-216ENST00000617432 SHISA2Q6UWI4 295 aa8.04□□□□□ -1.12
CUL3-216ENST00000617432 NDUFB9Q9Y6M9 179 aa8.04□□□□□ -1.12
CUL3-216ENST00000617432 MAGI1Q96QZ7 1491 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms