RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 PSMA5P28066 241 aa11.33□□□□□ -0.6
TPM1-233ENST00000610733 NMIQ13287 307 aaPredicted RBP11.33□□□□□ -0.6
TPM1-233ENST00000610733 RRP12Q5JTH9 1297 aaKnown RBP11.33□□□□□ -0.6
TPM1-233ENST00000610733 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
TPM1-233ENST00000610733 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
TPM1-233ENST00000610733 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
TPM1-233ENST00000610733 HOMEZQ8IX15 550 aa11.33□□□□□ -0.6
TPM1-233ENST00000610733 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.6
TPM1-233ENST00000610733 POLR1AO95602 1720 aaPredicted RBP11.32□□□□□ -0.6
TPM1-233ENST00000610733 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 BRD1O95696 1058 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 MAP7D2Q96T17 732 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 JAK2O60674 1132 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 PTPN21Q16825 1174 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 OTUD7BQ6GQQ9 843 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 CDC37L1Q7L3B6 337 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 STK38Q15208 465 aa11.32□□□□□ -0.6
TPM1-233ENST00000610733 LIG1P18858 919 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 LARP1Q6PKG0 1096 aaKnown RBP11.31□□□□□ -0.6
TPM1-233ENST00000610733 NFXL1Q6ZNB6 911 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 CGNQ9P2M7 1197 aaKnown RBP11.31□□□□□ -0.6
TPM1-233ENST00000610733 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 GOLIM4O00461 696 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 PDCP20941 246 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 SYNE3Q6ZMZ3 975 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
TPM1-233ENST00000610733 CDC42BPBQ9Y5S2 1711 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 PYCARDQ9ULZ3 195 aa11.31□□□□□ -0.6
TPM1-233ENST00000610733 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
TPM1-233ENST00000610733 DYNC1I1O14576 645 aa11.3□□□□□ -0.6
TPM1-233ENST00000610733 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
TPM1-233ENST00000610733 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
TPM1-233ENST00000610733 DHX37Q8IY37 1157 aaKnown RBP11.3□□□□□ -0.6
TPM1-233ENST00000610733 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
TPM1-233ENST00000610733 ZSWIM4Q9H7M6 989 aa11.3□□□□□ -0.6
TPM1-233ENST00000610733 TYRO3Q06418 890 aa11.3□□□□□ -0.6
TPM1-233ENST00000610733 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
TPM1-233ENST00000610733 RXRAP19793 462 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 PLEKHO1Q53GL0 409 aaPredicted RBP11.29□□□□□ -0.6
TPM1-233ENST00000610733 SEC62Q99442 399 aaKnown RBP11.29□□□□□ -0.6
TPM1-233ENST00000610733 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
TPM1-233ENST00000610733 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 POGZQ7Z3K3 1410 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 CHGBP05060 677 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 NLRP1Q9C000 1473 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 LETM1O95202 739 aaPredicted RBP11.29□□□□□ -0.6
TPM1-233ENST00000610733 ME3Q16798 604 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 RALYLQ86SE5 291 aaKnown RBP11.29□□□□□ -0.6
TPM1-233ENST00000610733 USP16Q9Y5T5 823 aa11.29□□□□□ -0.6
TPM1-233ENST00000610733 CROCC2H7BZ55 1655 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 PREX2Q70Z35 1606 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 TRPM2O94759 1503 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 SGSM2O43147 1006 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 CREB3L3Q68CJ9 461 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 TLR7Q9NYK1 1049 aaKnown RBP11.28□□□□□ -0.6
TPM1-233ENST00000610733 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 POLR3GO15318 223 aaPredicted RBP11.28□□□□□ -0.6
TPM1-233ENST00000610733 ZNF853P0CG23 659 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 YEATS2Q9ULM3 1422 aa11.28□□□□□ -0.6
TPM1-233ENST00000610733 MADDQ8WXG6 1647 aa11.27□□□□□ -0.6
TPM1-233ENST00000610733 A0A087WZG4 1122 aa11.27□□□□□ -0.6
TPM1-233ENST00000610733 TPM4P67936 248 aa11.27□□□□□ -0.6
TPM1-233ENST00000610733 FSIP1Q8NA03 581 aa11.27□□□□□ -0.6
TPM1-233ENST00000610733 MNS1Q8NEH6 495 aa11.27□□□□□ -0.6
TPM1-233ENST00000610733 CABLES1Q8TDN4 633 aa11.27□□□□□ -0.6
TPM1-233ENST00000610733 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.6
TPM1-233ENST00000610733 SETD1BQ9UPS6 1966 aaKnown RBP11.27□□□□□ -0.6
TPM1-233ENST00000610733 SERPINC1P01008 464 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 Q6ZUG5 572 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 COPS6Q7L5N1 327 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 METP08581 1390 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 STRN4Q9NRL3 753 aa11.27□□□□□ -0.61
TPM1-233ENST00000610733 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
TPM1-233ENST00000610733 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 CCAR1Q8IX12 1150 aaKnown RBP11.26□□□□□ -0.61
TPM1-233ENST00000610733 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 TIMM10P62072 90 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 ZSCAN31Q96LW9 406 aaPredicted RBP11.26□□□□□ -0.61
TPM1-233ENST00000610733 DBF4Q9UBU7 674 aaPredicted RBP11.26□□□□□ -0.61
TPM1-233ENST00000610733 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 TTC6Q86TZ1 520 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
TPM1-233ENST00000610733 A0A0D9SFI3 127 aa11.25□□□□□ -0.61
TPM1-233ENST00000610733 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
TPM1-233ENST00000610733 HSPA4P34932 840 aa11.25□□□□□ -0.61
TPM1-233ENST00000610733 TNNT3P45378 269 aaPredicted RBP11.25□□□□□ -0.61
TPM1-233ENST00000610733 MTERF4Q7Z6M4 381 aaKnown RBP11.25□□□□□ -0.61
TPM1-233ENST00000610733 AOPEPQ8N6M6 819 aa11.25□□□□□ -0.61
TPM1-233ENST00000610733 FAM200AQ8TCP9 573 aa11.25□□□□□ -0.61
TPM1-233ENST00000610733 A0A1B0GVL5 298 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms