RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 USP42Q9H9J4 1324 aaKnown RBP11.4□□□□□ -0.58
NPC1-211ENST00000591075 ZNF831Q5JPB2 1677 aa11.4□□□□□ -0.58
NPC1-211ENST00000591075 NPHP1O15259 732 aa11.4□□□□□ -0.58
NPC1-211ENST00000591075 KCNQ3O43525 872 aa11.4□□□□□ -0.58
NPC1-211ENST00000591075 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
NPC1-211ENST00000591075 CLCN6P51797 869 aa11.4□□□□□ -0.58
NPC1-211ENST00000591075 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.58
NPC1-211ENST00000591075 NARFQ9UHQ1 456 aa11.4□□□□□ -0.58
NPC1-211ENST00000591075 COL15A1P39059 1388 aa11.4□□□□□ -0.59
NPC1-211ENST00000591075 FKBP8Q14318 412 aa11.39□□□□□ -0.59
NPC1-211ENST00000591075 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
NPC1-211ENST00000591075 RCAN3Q9UKA8 241 aa11.39□□□□□ -0.59
NPC1-211ENST00000591075 WWC3Q9ULE0 1092 aa11.39□□□□□ -0.59
NPC1-211ENST00000591075 A1BGP04217 495 aa11.38□□□□□ -0.59
NPC1-211ENST00000591075 HOXB7P09629 217 aa11.38□□□□□ -0.59
NPC1-211ENST00000591075 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
NPC1-211ENST00000591075 TGFB2P61812 414 aa11.38□□□□□ -0.59
NPC1-211ENST00000591075 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
NPC1-211ENST00000591075 BICDL1Q6ZP65 573 aa11.38□□□□□ -0.59
NPC1-211ENST00000591075 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
NPC1-211ENST00000591075 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
NPC1-211ENST00000591075 MYH14Q7Z406 1995 aaKnown RBP11.37□□□□□ -0.59
NPC1-211ENST00000591075 MS4A1P11836 297 aa11.37□□□□□ -0.59
NPC1-211ENST00000591075 EIF5P55010 431 aaKnown RBP11.37□□□□□ -0.59
NPC1-211ENST00000591075 ALDH1L2Q3SY69 923 aa11.37□□□□□ -0.59
NPC1-211ENST00000591075 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
NPC1-211ENST00000591075 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
NPC1-211ENST00000591075 COL5A3P25940 1745 aaPredicted RBP11.37□□□□□ -0.59
NPC1-211ENST00000591075 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
NPC1-211ENST00000591075 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 CACNA1FO60840 1977 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 NEFLP07196 543 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
NPC1-211ENST00000591075 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 ZNF652Q9Y2D9 606 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 LAS1LQ9Y4W2 734 aaKnown RBP11.36□□□□□ -0.59
NPC1-211ENST00000591075 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
NPC1-211ENST00000591075 TJP1Q07157 1748 aa11.35□□□□□ -0.59
NPC1-211ENST00000591075 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
NPC1-211ENST00000591075 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
NPC1-211ENST00000591075 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
NPC1-211ENST00000591075 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
NPC1-211ENST00000591075 COL24A1Q17RW2 1714 aa11.35□□□□□ -0.59
NPC1-211ENST00000591075 CICQ96RK0 1608 aaPredicted RBP11.35□□□□□ -0.59
NPC1-211ENST00000591075 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
NPC1-211ENST00000591075 POLRMTO00411 1230 aaKnown RBP11.34□□□□□ -0.59
NPC1-211ENST00000591075 IPO8O15397 1037 aaKnown RBP11.34□□□□□ -0.59
NPC1-211ENST00000591075 SERPINB2P05120 415 aa11.34□□□□□ -0.59
NPC1-211ENST00000591075 DPEP1P16444 411 aa11.34□□□□□ -0.59
NPC1-211ENST00000591075 TM4SF1P30408 202 aa11.34□□□□□ -0.59
NPC1-211ENST00000591075 PIP4K2AP48426 406 aaPredicted RBP11.34□□□□□ -0.59
NPC1-211ENST00000591075 DDR1Q08345 913 aa11.34□□□□□ -0.59
NPC1-211ENST00000591075 NFIXQ14938 502 aa11.34□□□□□ -0.59
NPC1-211ENST00000591075 GOLGB1Q14789 3259 aaKnown RBP11.34□□□□□ -0.59
NPC1-211ENST00000591075 UTRNP46939 3433 aa11.34□□□□□ -0.59
NPC1-211ENST00000591075 PRAMEF22A3QJZ6 481 aa11.33□□□□□ -0.6
NPC1-211ENST00000591075 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
NPC1-211ENST00000591075 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
NPC1-211ENST00000591075 TWISTNBQ3B726 338 aaPredicted RBP11.33□□□□□ -0.6
NPC1-211ENST00000591075 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
NPC1-211ENST00000591075 PIM2Q9P1W9 311 aa11.33□□□□□ -0.6
NPC1-211ENST00000591075 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
NPC1-211ENST00000591075 VAMP4O75379 141 aa11.32□□□□□ -0.6
NPC1-211ENST00000591075 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
NPC1-211ENST00000591075 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
NPC1-211ENST00000591075 ST5P78524 1137 aa11.32□□□□□ -0.6
NPC1-211ENST00000591075 AAMPQ13685 434 aa11.32□□□□□ -0.6
NPC1-211ENST00000591075 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
NPC1-211ENST00000591075 ARHGAP27Q6ZUM4 889 aa11.32□□□□□ -0.6
NPC1-211ENST00000591075 ARHGAP45Q92619 1136 aa11.32□□□□□ -0.6
NPC1-211ENST00000591075 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
NPC1-211ENST00000591075 C10orf71Q711Q0 1435 aa11.32□□□□□ -0.6
NPC1-211ENST00000591075 UBR2Q8IWV8 1755 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 H0YIN7 160 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 MYL6BP14649 208 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
NPC1-211ENST00000591075 RARSP54136 660 aaKnown RBP11.31□□□□□ -0.6
NPC1-211ENST00000591075 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 TBC1D9BQ66K14 1250 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
NPC1-211ENST00000591075 CHMP4BQ9H444 224 aaKnown RBP11.31□□□□□ -0.6
NPC1-211ENST00000591075 BCL2L12Q9HB09 334 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 C4AP0C0L4 1744 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
NPC1-211ENST00000591075 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
NPC1-211ENST00000591075 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 CHRNA5P30532 468 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 PDE6BP35913 854 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 PDE3AQ14432 1141 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 NBPF5PQ86XG9 351 aaPredicted RBP11.3□□□□□ -0.6
NPC1-211ENST00000591075 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
NPC1-211ENST00000591075 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
NPC1-211ENST00000591075 CHD4Q14839 1912 aa11.29□□□□□ -0.6
NPC1-211ENST00000591075 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms