RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	ZNF295-AS1	Q8N0V1	137 aa		7.91	□□□□□ -1.14
ATP9B-223	ENST00000590608	CCDC87	Q9NVE4	849 aa		7.91	□□□□□ -1.14
ATP9B-223	ENST00000590608	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.91	□□□□□ -1.14
ATP9B-223	ENST00000590608		A6NJY4	79 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	TNFRSF10B	O14763	440 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	NPR3	P17342	541 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	EIF1AX	P47813	144 aa	Known RBP	7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	AAMP	Q13685	434 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	SH3PXD2A	Q5TCZ1	1133 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	LYSMD3	Q7Z3D4	306 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	GPR161	Q8N6U8	529 aa	Known RBP	7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	TMC1	Q8TDI8	760 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	NGLY1	Q96IV0	654 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	GRIP2	Q9C0E4	1043 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	QTRT2	Q9H974	415 aa	Known RBP	7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	LRFN2	Q9ULH4	789 aa		7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.9	□□□□□ -1.14
ATP9B-223	ENST00000590608	RHOQ	P17081	205 aa		7.89	□□□□□ -1.15
ATP9B-223	ENST00000590608	KRT76	Q01546	638 aa		7.89	□□□□□ -1.15
ATP9B-223	ENST00000590608	TSNAXIP1	Q2TAA8	658 aa		7.89	□□□□□ -1.15
ATP9B-223	ENST00000590608	PRICKLE2	Q7Z3G6	844 aa		7.89	□□□□□ -1.15
ATP9B-223	ENST00000590608	ATCAY	Q86WG3	371 aa		7.89	□□□□□ -1.15
ATP9B-223	ENST00000590608	NLRP3	Q96P20	1036 aa		7.89	□□□□□ -1.15
ATP9B-223	ENST00000590608	BRPF3	Q9ULD4	1205 aa		7.89	□□□□□ -1.15
ATP9B-223	ENST00000590608	NDUFB5	O43674	189 aa		7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	FZD6	O60353	706 aa		7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	ITGA6	P23229	1130 aa		7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	TLR1	Q15399	786 aa		7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	FAM161B	Q96MY7	647 aa		7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	RBCK1	Q9BYM8	510 aa		7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	RNF19A	Q9NV58	838 aa		7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.88	□□□□□ -1.15
ATP9B-223	ENST00000590608	CDK2AP1	O14519	115 aa		7.87	□□□□□ -1.15
ATP9B-223	ENST00000590608	ZBTB39	O15060	712 aa		7.87	□□□□□ -1.15
ATP9B-223	ENST00000590608	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.87	□□□□□ -1.15
ATP9B-223	ENST00000590608	NANOS1	Q8WY41	292 aa	Known RBP	7.87	□□□□□ -1.15
ATP9B-223	ENST00000590608	STIM2	Q9P246	746 aa		7.87	□□□□□ -1.15
ATP9B-223	ENST00000590608	SPATA31C2	B4DYI2	1134 aa		7.86	□□□□□ -1.15
ATP9B-223	ENST00000590608	TREH	O43280	583 aa		7.86	□□□□□ -1.15
ATP9B-223	ENST00000590608	MAPK8	P45983	427 aa		7.86	□□□□□ -1.15
ATP9B-223	ENST00000590608	PSMA6	P60900	246 aa	Known RBP	7.86	□□□□□ -1.15
ATP9B-223	ENST00000590608	SETDB2	Q96T68	719 aa		7.86	□□□□□ -1.15
ATP9B-223	ENST00000590608	PARP3	Q9Y6F1	533 aa		7.86	□□□□□ -1.15
ATP9B-223	ENST00000590608	GPR182	O15218	404 aa		7.85	□□□□□ -1.15
ATP9B-223	ENST00000590608	VAMP1	P23763	118 aa		7.85	□□□□□ -1.15
ATP9B-223	ENST00000590608	FMR1	Q06787	632 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
ATP9B-223	ENST00000590608	POTEA	Q6S8J7	498 aa		7.85	□□□□□ -1.15
ATP9B-223	ENST00000590608	ZDHHC1	Q8WTX9	485 aa		7.85	□□□□□ -1.15
ATP9B-223	ENST00000590608	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.85	□□□□□ -1.15
ATP9B-223	ENST00000590608	HCN4	Q9Y3Q4	1203 aa		7.85	□□□□□ -1.15
ATP9B-223	ENST00000590608	EML1	O00423	815 aa		7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	INSM1	Q01101	510 aa	Predicted RBP	7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	POU4F2	Q12837	409 aa		7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	SLC27A3	Q5K4L6	730 aa		7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	NBPF10	Q6P3W6	841 aa	Known RBP	7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	NBPF15	Q8N660	670 aa		7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	WWC3	Q9ULE0	1092 aa		7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	ZNF232	Q9UNY5	417 aa		7.84	□□□□□ -1.15
ATP9B-223	ENST00000590608	IGHA2	P01877	340 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	EHHADH	Q08426	723 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	DSC3	Q14574	896 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	COL19A1	Q14993	1142 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	RNFT1	Q5M7Z0	435 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	C9orf131	Q5VYM1	1079 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	ETFBKMT	Q8IXQ9	262 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	STAG2	Q8N3U4	1231 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	RHBDD1	Q8TEB9	315 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	BACH2	Q9BYV9	841 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	CABP1	Q9NZU7	370 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	KLK14	Q9P0G3	267 aa		7.83	□□□□□ -1.16
ATP9B-223	ENST00000590608	SERTM1	A2A2V5	107 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	LDHB	P07195	334 aa	Known RBP	7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	DGKZ	Q13574	1117 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	TEAD4	Q15561	434 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	C4orf17	Q53FE4	359 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	WDR44	Q5JSH3	913 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	VWA5B2	Q8N398	1253 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	ZNF837	Q96EG3	531 aa	Predicted RBP	7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	DUSP9	Q99956	384 aa	Known RBP	7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	POLI	Q9UNA4	740 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	CHMP3	Q9Y3E7	222 aa		7.82	□□□□□ -1.16
ATP9B-223	ENST00000590608	CDC14C	A4D256	554 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	NOS2	P35228	1153 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	PLCB3	Q01970	1234 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	DNM1	Q05193	864 aa	Known RBP	7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	MRPL58	Q14197	206 aa	Known RBP	7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	ALKBH2	Q6NS38	261 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	TMEM214	Q6NUQ4	689 aa	Known RBP	7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	ALDH16A1	Q8IZ83	802 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	MYO19	Q96H55	970 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	FAM129B	Q96TA1	746 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	PARP2	Q9UGN5	583 aa		7.81	□□□□□ -1.16
ATP9B-223	ENST00000590608	THBS1	P07996	1170 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	HIRA	P54198	1017 aa	Predicted RBP	7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	GNAS	Q5JWF2	1037 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	ABTB2	Q8N961	1025 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	ZSCAN1	Q8NBB4	408 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms