RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.94	■■□□□ 1.26
ATP9B-223	ENST00000590608	CHIC1	Q5VXU3	224 aa		22.08	■■□□□ 1.13
ATP9B-223	ENST00000590608	PHF23	Q9BUL5	403 aa	Predicted RBP	19.44	■□□□□ 0.7
ATP9B-223	ENST00000590608	SENP3	Q9H4L4	574 aa	Predicted RBP	19.39	■□□□□ 0.69
ATP9B-223	ENST00000590608	FOXD1	Q16676	465 aa		18.09	■□□□□ 0.49
ATP9B-223	ENST00000590608	PLPPR3	Q6T4P5	718 aa		17.76	■□□□□ 0.43
ATP9B-223	ENST00000590608	POTED	Q86YR6	584 aa		17.64	■□□□□ 0.41
ATP9B-223	ENST00000590608	PPP6R1	Q9UPN7	881 aa		17.24	■□□□□ 0.35
ATP9B-223	ENST00000590608	ADRA2B	P18089	450 aa		17.17	■□□□□ 0.34
ATP9B-223	ENST00000590608	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.96	■□□□□ 0.31
ATP9B-223	ENST00000590608	MSH5	O43196	834 aa		16.71	■□□□□ 0.27
ATP9B-223	ENST00000590608	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.67	■□□□□ 0.1
ATP9B-223	ENST00000590608	PPP4R3CP	Q6ZMV5	832 aa		15.65	■□□□□ 0.1
ATP9B-223	ENST00000590608	SCAF1	Q9H7N4	1312 aa	Known RBP	15.58	■□□□□ 0.08
ATP9B-223	ENST00000590608	DMRT2	Q9Y5R5	561 aa		15.47	■□□□□ 0.07
ATP9B-223	ENST00000590608	CNKSR2	Q8WXI2	1034 aa		15.24	■□□□□ 0.03
ATP9B-223	ENST00000590608	NCBP3	Q53F19	620 aa	Known RBP	15.07	■□□□□ 0
ATP9B-223	ENST00000590608	HOXD11	P31277	338 aa	Predicted RBP	15.06	■□□□□ 0
ATP9B-223	ENST00000590608	KCNA4	P22459	653 aa		15.04	■□□□□ -0
ATP9B-223	ENST00000590608	RNF216	Q9NWF9	866 aa	Predicted RBP	15.02	■□□□□ -0
ATP9B-223	ENST00000590608	NPM3	O75607	178 aa	Known RBP	14.97	□□□□□ -0.01
ATP9B-223	ENST00000590608	DCAF8L1	A6NGE4	600 aa		14.74	□□□□□ -0.05
ATP9B-223	ENST00000590608	DNAJC5B	Q9UF47	199 aa		14.58	□□□□□ -0.08
ATP9B-223	ENST00000590608	CACNB1	Q02641	598 aa	Predicted RBP	14.46	□□□□□ -0.09
ATP9B-223	ENST00000590608	RNF39	Q9H2S5	420 aa		14.35	□□□□□ -0.11
ATP9B-223	ENST00000590608	EHMT2	Q96KQ7	1210 aa		14.32	□□□□□ -0.12
ATP9B-223	ENST00000590608	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.27	□□□□□ -0.13
ATP9B-223	ENST00000590608	SLC4A2	P04920	1241 aa		14.23	□□□□□ -0.13
ATP9B-223	ENST00000590608	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.21	□□□□□ -0.13
ATP9B-223	ENST00000590608		U3KPZ7	1027 aa	Predicted RBP	14.12	□□□□□ -0.15
ATP9B-223	ENST00000590608	C1QBP	Q07021	282 aa	Known RBP	14.1	□□□□□ -0.15
ATP9B-223	ENST00000590608	ZBTB22	O15209	634 aa		13.9	□□□□□ -0.18
ATP9B-223	ENST00000590608	FOXD4L1	Q9NU39	408 aa		13.87	□□□□□ -0.19
ATP9B-223	ENST00000590608	CSRNP3	Q8WYN3	585 aa		13.81	□□□□□ -0.2
ATP9B-223	ENST00000590608	MYCN	P04198	464 aa	Predicted RBP	13.79	□□□□□ -0.2
ATP9B-223	ENST00000590608	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.79	□□□□□ -0.2
ATP9B-223	ENST00000590608	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.71	□□□□□ -0.21
ATP9B-223	ENST00000590608	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.71	□□□□□ -0.21
ATP9B-223	ENST00000590608	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.69	□□□□□ -0.22
ATP9B-223	ENST00000590608	CAPN15	O75808	1086 aa		13.66	□□□□□ -0.22
ATP9B-223	ENST00000590608	APLP2	Q06481	763 aa		13.59	□□□□□ -0.23
ATP9B-223	ENST00000590608	POTEH	Q6S545	545 aa		13.58	□□□□□ -0.24
ATP9B-223	ENST00000590608	DSG3	P32926	999 aa		13.56	□□□□□ -0.24
ATP9B-223	ENST00000590608	TRH	P20396	242 aa	Predicted RBP	13.55	□□□□□ -0.24
ATP9B-223	ENST00000590608	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.54	□□□□□ -0.24
ATP9B-223	ENST00000590608	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.53	□□□□□ -0.24
ATP9B-223	ENST00000590608	ABCB7	O75027	752 aa		13.44	□□□□□ -0.26
ATP9B-223	ENST00000590608	ATXN8OS	P0DMR3	200 aa		13.37	□□□□□ -0.27
ATP9B-223	ENST00000590608	POLA2	Q14181	598 aa		13.28	□□□□□ -0.28
ATP9B-223	ENST00000590608	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.99	□□□□□ -0.33
ATP9B-223	ENST00000590608	MKRN4P	Q13434	485 aa	Predicted RBP	12.93	□□□□□ -0.34
ATP9B-223	ENST00000590608	OSCAR	Q8IYS5	282 aa		12.9	□□□□□ -0.34
ATP9B-223	ENST00000590608	RBM42	Q9BTD8	480 aa	Known RBP	12.85	□□□□□ -0.35
ATP9B-223	ENST00000590608	FBLN2	P98095	1184 aa		12.84	□□□□□ -0.35
ATP9B-223	ENST00000590608	SPDYE2B	A6NHP3	402 aa		12.66	□□□□□ -0.38
ATP9B-223	ENST00000590608	SPDYE6	P0CI01	402 aa		12.66	□□□□□ -0.38
ATP9B-223	ENST00000590608	SPDYE2	Q495Y8	402 aa		12.66	□□□□□ -0.38
ATP9B-223	ENST00000590608	AKT1S1	Q96B36	256 aa		12.66	□□□□□ -0.38
ATP9B-223	ENST00000590608	SSUH2	Q9Y2M2	353 aa		12.6	□□□□□ -0.39
ATP9B-223	ENST00000590608	REM2	Q8IYK8	340 aa	Predicted RBP	12.57	□□□□□ -0.4
ATP9B-223	ENST00000590608	ZNF692	Q9BU19	519 aa	Predicted RBP	12.55	□□□□□ -0.4
ATP9B-223	ENST00000590608	RTN4	Q9NQC3	1192 aa	Known RBP	12.49	□□□□□ -0.41
ATP9B-223	ENST00000590608	CHRDL2	Q6WN34	429 aa		12.47	□□□□□ -0.41
ATP9B-223	ENST00000590608	PITPNM1	O00562	1244 aa		12.46	□□□□□ -0.41
ATP9B-223	ENST00000590608	FKBP8	Q14318	412 aa		12.43	□□□□□ -0.42
ATP9B-223	ENST00000590608	SPDYE4	A6NLX3	237 aa		12.42	□□□□□ -0.42
ATP9B-223	ENST00000590608	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
ATP9B-223	ENST00000590608	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.35	□□□□□ -0.43
ATP9B-223	ENST00000590608	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.33	□□□□□ -0.44
ATP9B-223	ENST00000590608	CLEC11A	Q9Y240	323 aa		12.28	□□□□□ -0.44
ATP9B-223	ENST00000590608	PROM2	Q8N271	834 aa		12.27	□□□□□ -0.45
ATP9B-223	ENST00000590608	PIP4P2	Q8N4L2	257 aa		12.27	□□□□□ -0.45
ATP9B-223	ENST00000590608	FXR2	P51116	673 aa	Known RBP eCLIP	12.26	□□□□□ -0.45
ATP9B-223	ENST00000590608	SLC24A1	O60721	1099 aa		12.25	□□□□□ -0.45
ATP9B-223	ENST00000590608	SP7	Q8TDD2	431 aa	Predicted RBP	12.17	□□□□□ -0.46
ATP9B-223	ENST00000590608	PRR29	P0C7W0	189 aa		12.12	□□□□□ -0.47
ATP9B-223	ENST00000590608	PRKAR2A	P13861	404 aa	Known RBP	12.1	□□□□□ -0.47
ATP9B-223	ENST00000590608	CHADL	Q6NUI6	762 aa		12.08	□□□□□ -0.48
ATP9B-223	ENST00000590608	STAG3	Q9UJ98	1225 aa		12.08	□□□□□ -0.48
ATP9B-223	ENST00000590608	CREBZF	Q9NS37	354 aa		12	□□□□□ -0.49
ATP9B-223	ENST00000590608	FBXO3	Q9UK99	471 aa		11.91	□□□□□ -0.5
ATP9B-223	ENST00000590608	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.91	□□□□□ -0.5
ATP9B-223	ENST00000590608	MNX1	P50219	401 aa	Predicted RBP	11.89	□□□□□ -0.51
ATP9B-223	ENST00000590608	HAX1	O00165	279 aa		11.88	□□□□□ -0.51
ATP9B-223	ENST00000590608	EVX2	Q03828	476 aa		11.88	□□□□□ -0.51
ATP9B-223	ENST00000590608	C19orf67	A6NJJ6	358 aa		11.86	□□□□□ -0.51
ATP9B-223	ENST00000590608	VASP	P50552	380 aa	Predicted RBP	11.79	□□□□□ -0.52
ATP9B-223	ENST00000590608	MIER1	Q8N108	512 aa		11.76	□□□□□ -0.53
ATP9B-223	ENST00000590608	PLSCR2	Q9NRY7	297 aa		11.75	□□□□□ -0.53
ATP9B-223	ENST00000590608	CD44	P16070	742 aa	Known RBP	11.74	□□□□□ -0.53
ATP9B-223	ENST00000590608	PLCD3	Q8N3E9	789 aa		11.71	□□□□□ -0.53
ATP9B-223	ENST00000590608	NPM1	P06748	294 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
ATP9B-223	ENST00000590608	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.66	□□□□□ -0.54
ATP9B-223	ENST00000590608	PLEKHG5	O94827	1062 aa		11.64	□□□□□ -0.55
ATP9B-223	ENST00000590608	ZRANB1	Q9UGI0	708 aa		11.62	□□□□□ -0.55
ATP9B-223	ENST00000590608	RASEF	Q8IZ41	740 aa		11.6	□□□□□ -0.55
ATP9B-223	ENST00000590608	ZNF579	Q8NAF0	562 aa	Known RBP	11.6	□□□□□ -0.55
ATP9B-223	ENST00000590608	NUBP1	P53384	320 aa		11.58	□□□□□ -0.56
ATP9B-223	ENST00000590608	GABBR2	O75899	941 aa		11.57	□□□□□ -0.56
ATP9B-223	ENST00000590608	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.57	□□□□□ -0.56

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