RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 TLR1Q15399 786 aa8.62□□□□□ -1.03
KARS-208ENST00000566772 ALDH16A1Q8IZ83 802 aa8.62□□□□□ -1.03
KARS-208ENST00000566772 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
KARS-208ENST00000566772 ZNF394Q53GI3 561 aa8.61□□□□□ -1.03
KARS-208ENST00000566772 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
KARS-208ENST00000566772 CCDC116Q8IYX3 515 aa8.61□□□□□ -1.03
KARS-208ENST00000566772 ZDHHC1Q8WTX9 485 aa8.61□□□□□ -1.03
KARS-208ENST00000566772 GMLQ99445 158 aa8.61□□□□□ -1.03
KARS-208ENST00000566772 ZNF232Q9UNY5 417 aa8.61□□□□□ -1.03
KARS-208ENST00000566772 TLL2Q9Y6L7 1015 aa8.61□□□□□ -1.03
KARS-208ENST00000566772 EIF1AYO14602 144 aaKnown RBP8.6□□□□□ -1.03
KARS-208ENST00000566772 NOS2P35228 1153 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 RACK1P63244 317 aaKnown RBP8.6□□□□□ -1.03
KARS-208ENST00000566772 TEAD4Q15561 434 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 CCDC144BQ3MJ40 725 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 RC3H1Q5TC82 1133 aaKnown RBP8.6□□□□□ -1.03
KARS-208ENST00000566772 FBF1Q8TES7 1133 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 CNKSR1Q969H4 720 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 CRELD1Q96HD1 420 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 DDX41Q9UJV9 622 aaKnown RBP8.6□□□□□ -1.03
KARS-208ENST00000566772 INPP5FQ9Y2H2 1132 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 PCDHGB7Q9Y5F8 929 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 HRH3Q9Y5N1 445 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
KARS-208ENST00000566772 ANKRD62A6NC57 917 aa8.59□□□□□ -1.03
KARS-208ENST00000566772 RNF223E7ERA6 249 aa8.59□□□□□ -1.03
KARS-208ENST00000566772 HIRAP54198 1017 aaPredicted RBP8.59□□□□□ -1.03
KARS-208ENST00000566772 RTN1Q16799 776 aa8.59□□□□□ -1.03
KARS-208ENST00000566772 ZNF662Q6ZS27 426 aa8.59□□□□□ -1.03
KARS-208ENST00000566772 GPR152Q8TDT2 470 aa8.59□□□□□ -1.03
KARS-208ENST00000566772 ESYT1Q9BSJ8 1104 aa8.59□□□□□ -1.03
KARS-208ENST00000566772 CABP1Q9NZU7 370 aa8.59□□□□□ -1.03
KARS-208ENST00000566772 OPLAHO14841 1288 aa8.58□□□□□ -1.04
KARS-208ENST00000566772 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
KARS-208ENST00000566772 ZNF654Q8IZM8 581 aa8.58□□□□□ -1.04
KARS-208ENST00000566772 PMFBP1Q8TBY8 1022 aa8.58□□□□□ -1.04
KARS-208ENST00000566772 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
KARS-208ENST00000566772 ARMC5Q96C12 935 aa8.58□□□□□ -1.04
KARS-208ENST00000566772 FRMD6Q96NE9 622 aa8.58□□□□□ -1.04
KARS-208ENST00000566772 A6NHS1 94 aa8.57□□□□□ -1.04
KARS-208ENST00000566772 NR3C2P08235 984 aa8.57□□□□□ -1.04
KARS-208ENST00000566772 ARID5AQ03989 594 aa8.57□□□□□ -1.04
KARS-208ENST00000566772 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
KARS-208ENST00000566772 ZNF295-AS1Q8N0V1 137 aa8.57□□□□□ -1.04
KARS-208ENST00000566772 NUDT16Q96DE0 195 aaKnown RBP8.57□□□□□ -1.04
KARS-208ENST00000566772 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
KARS-208ENST00000566772 PHACTR1Q9C0D0 580 aa8.57□□□□□ -1.04
KARS-208ENST00000566772 SRA1Q9HD15 236 aaKnown RBP8.57□□□□□ -1.04
KARS-208ENST00000566772 SIAH2O43255 324 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 ADH1CP00326 375 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 PCSK2P16519 638 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 EIF4BP23588 611 aaKnown RBP8.56□□□□□ -1.04
KARS-208ENST00000566772 CENPCQ03188 943 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 RBL2Q08999 1139 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 NR5A1Q13285 461 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 USP48Q86UV5 1035 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 TREML1Q86YW5 311 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 MPNDQ8N594 471 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 PIF1Q9H611 641 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 SPG7Q9UQ90 795 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 RB1CC1Q8TDY2 1594 aa8.56□□□□□ -1.04
KARS-208ENST00000566772 TLDC2A0PJX2 215 aa8.55□□□□□ -1.04
KARS-208ENST00000566772 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.55□□□□□ -1.04
KARS-208ENST00000566772 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
KARS-208ENST00000566772 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
KARS-208ENST00000566772 KDF1Q8NAX2 398 aaPredicted RBP8.55□□□□□ -1.04
KARS-208ENST00000566772 FHDC1Q9C0D6 1143 aaPredicted RBP8.55□□□□□ -1.04
KARS-208ENST00000566772 DNAJC25Q9H1X3 360 aa8.55□□□□□ -1.04
KARS-208ENST00000566772 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
KARS-208ENST00000566772 TMA7Q9Y2S6 64 aaKnown RBP8.55□□□□□ -1.04
KARS-208ENST00000566772 RPIAP49247 311 aa8.54□□□□□ -1.04
KARS-208ENST00000566772 PTPN12Q05209 780 aaKnown RBP8.54□□□□□ -1.04
KARS-208ENST00000566772 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
KARS-208ENST00000566772 ANKRD13AQ8IZ07 590 aa8.54□□□□□ -1.04
KARS-208ENST00000566772 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
KARS-208ENST00000566772 CPNE3O75131 537 aaKnown RBP8.53□□□□□ -1.04
KARS-208ENST00000566772 NEFLP07196 543 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 CLN3Q13286 438 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 USPL1Q5W0Q7 1092 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 HS2ST1Q7LGA3 356 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 TTC16Q8NEE8 873 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 OSBPL7Q9BZF2 842 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 ZSWIM4Q9H7M6 989 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 GGT7Q9UJ14 662 aa8.53□□□□□ -1.04
KARS-208ENST00000566772 USP31Q70CQ4 1352 aa8.52□□□□□ -1.05
KARS-208ENST00000566772 CD2BP2O95400 341 aaKnown RBP8.52□□□□□ -1.05
KARS-208ENST00000566772 ADH1AP07327 375 aa8.52□□□□□ -1.05
KARS-208ENST00000566772 MCF2L2Q86YR7 1114 aa8.52□□□□□ -1.05
KARS-208ENST00000566772 EPS8L3Q8TE67 593 aaKnown RBP8.52□□□□□ -1.05
KARS-208ENST00000566772 MICAL2O94851 1124 aa8.51□□□□□ -1.05
KARS-208ENST00000566772 IRS1P35568 1242 aa8.51□□□□□ -1.05
KARS-208ENST00000566772 TXLNAP40222 546 aa8.51□□□□□ -1.05
KARS-208ENST00000566772 CBLBQ13191 982 aa8.51□□□□□ -1.05
KARS-208ENST00000566772 MEI1Q5TIA1 1274 aa8.51□□□□□ -1.05
KARS-208ENST00000566772 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
KARS-208ENST00000566772 PPARGC1BQ86YN6 1023 aaKnown RBP8.51□□□□□ -1.05
KARS-208ENST00000566772 C12orf49Q9H741 205 aa8.51□□□□□ -1.05
KARS-208ENST00000566772 MEN1O00255 615 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms