RNA–Protein interactions for RNA: ENST00000566106.1

SHISA9-204, Transcript of shisa family member 9, humanhuman

TSL 4

Gene SHISA9, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-204ENST00000566106 CHMP4BQ9H444 224 aaKnown RBP10.54□□□□□ -0.72
SHISA9-204ENST00000566106 PIM2Q9P1W9 311 aa10.54□□□□□ -0.72
SHISA9-204ENST00000566106 PKD1L3Q7Z443 1732 aa10.53□□□□□ -0.72
SHISA9-204ENST00000566106 SIPA1L3O60292 1781 aaPredicted RBP10.53□□□□□ -0.72
SHISA9-204ENST00000566106 N4BP2Q86UW6 1770 aaPredicted RBP10.53□□□□□ -0.72
SHISA9-204ENST00000566106 DALRD3Q5D0E6 543 aaKnown RBP10.53□□□□□ -0.72
SHISA9-204ENST00000566106 TNNQ9UQP3 1299 aa10.53□□□□□ -0.72
SHISA9-204ENST00000566106 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
SHISA9-204ENST00000566106 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
SHISA9-204ENST00000566106 VIRMAQ69YN4 1812 aaKnown RBP10.53□□□□□ -0.72
SHISA9-204ENST00000566106 ABCC4O15439 1325 aa10.53□□□□□ -0.72
SHISA9-204ENST00000566106 API5Q9BZZ5 524 aaKnown RBP10.52□□□□□ -0.73
SHISA9-204ENST00000566106 TMOD3Q9NYL9 352 aa10.52□□□□□ -0.73
SHISA9-204ENST00000566106 ASAP1Q9ULH1 1129 aa10.52□□□□□ -0.73
SHISA9-204ENST00000566106 CACNA1FO60840 1977 aa10.52□□□□□ -0.73
SHISA9-204ENST00000566106 GYS1P13807 737 aa10.51□□□□□ -0.73
SHISA9-204ENST00000566106 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
SHISA9-204ENST00000566106 PLEKHO1Q53GL0 409 aaPredicted RBP10.51□□□□□ -0.73
SHISA9-204ENST00000566106 AKAP4Q5JQC9 854 aa10.51□□□□□ -0.73
SHISA9-204ENST00000566106 IL17REQ8NFR9 667 aa10.51□□□□□ -0.73
SHISA9-204ENST00000566106 ARHGEF1Q92888 912 aaKnown RBP10.51□□□□□ -0.73
SHISA9-204ENST00000566106 ZBTB40Q9NUA8 1239 aa10.51□□□□□ -0.73
SHISA9-204ENST00000566106 PTPRCP08575 1304 aa10.51□□□□□ -0.73
SHISA9-204ENST00000566106 TAF1LQ8IZX4 1826 aa10.51□□□□□ -0.73
SHISA9-204ENST00000566106 UBR3Q6ZT12 1888 aa10.51□□□□□ -0.73
SHISA9-204ENST00000566106 PCNTO95613 3336 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 VEGFAP15692 232 aaPredicted RBP10.5□□□□□ -0.73
SHISA9-204ENST00000566106 RFC4P35249 363 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 HDAC1Q13547 482 aaPredicted RBP10.5□□□□□ -0.73
SHISA9-204ENST00000566106 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
SHISA9-204ENST00000566106 TMEM57Q8N5G2 664 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 BCL11AQ9H165 835 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 ATG3Q9NT62 314 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.73
SHISA9-204ENST00000566106 TSPYL4Q9UJ04 414 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 KIAA1551Q9HCM1 1747 aa10.5□□□□□ -0.73
SHISA9-204ENST00000566106 IGHDP01880 384 aa10.49□□□□□ -0.73
SHISA9-204ENST00000566106 CHRNA5P30532 468 aa10.49□□□□□ -0.73
SHISA9-204ENST00000566106 RASSF7Q02833 373 aa10.49□□□□□ -0.73
SHISA9-204ENST00000566106 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
SHISA9-204ENST00000566106 RWDD1Q9H446 243 aaPredicted RBP10.49□□□□□ -0.73
SHISA9-204ENST00000566106 MKRN1Q9UHC7 482 aaKnown RBP10.49□□□□□ -0.73
SHISA9-204ENST00000566106 SPG7Q9UQ90 795 aa10.49□□□□□ -0.73
SHISA9-204ENST00000566106 ZC3H4Q9UPT8 1303 aaKnown RBP10.49□□□□□ -0.73
SHISA9-204ENST00000566106 SCN11AQ9UI33 1791 aa10.49□□□□□ -0.73
SHISA9-204ENST00000566106 GLTPD2A6NH11 291 aa10.48□□□□□ -0.73
SHISA9-204ENST00000566106 FOXN1O15353 648 aa10.48□□□□□ -0.73
SHISA9-204ENST00000566106 HOXB7P09629 217 aa10.48□□□□□ -0.73
SHISA9-204ENST00000566106 INTS3Q68E01 1043 aaKnown RBP10.48□□□□□ -0.73
SHISA9-204ENST00000566106 ITPRIPQ8IWB1 547 aa10.48□□□□□ -0.73
SHISA9-204ENST00000566106 PCDH10Q9P2E7 1040 aa10.48□□□□□ -0.73
SHISA9-204ENST00000566106 MRC1P22897 1456 aa10.48□□□□□ -0.73
SHISA9-204ENST00000566106 KIF13BQ9NQT8 1826 aa10.47□□□□□ -0.73
SHISA9-204ENST00000566106 ELL2O00472 640 aaPredicted RBP10.47□□□□□ -0.73
SHISA9-204ENST00000566106 ZBTB7BO15156 539 aaPredicted RBP10.47□□□□□ -0.73
SHISA9-204ENST00000566106 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
SHISA9-204ENST00000566106 PRDM10Q9NQV6 1147 aa10.47□□□□□ -0.73
SHISA9-204ENST00000566106 RPS6KA4O75676 772 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 LMNB1P20700 586 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 DDR1Q08345 913 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 C1orf141Q5JVX7 400 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 RC3H1Q5TC82 1133 aaKnown RBP10.46□□□□□ -0.73
SHISA9-204ENST00000566106 ZNF530Q6P9A1 599 aaPredicted RBP10.46□□□□□ -0.73
SHISA9-204ENST00000566106 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
SHISA9-204ENST00000566106 BACH2Q9BYV9 841 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 CREBZFQ9NS37 354 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 CNTNAP4Q9C0A0 1308 aa10.46□□□□□ -0.73
SHISA9-204ENST00000566106 C4AP0C0L4 1744 aa10.46□□□□□ -0.74
SHISA9-204ENST00000566106 TNRC6CQ9HCJ0 1690 aaKnown RBP10.45□□□□□ -0.74
SHISA9-204ENST00000566106 HEG1Q9ULI3 1381 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 PHKG2P15735 406 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 PDE4AP27815 886 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 KRT24Q2M2I5 525 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 CCDC30Q5VVM6 783 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 IFNL2Q8IZJ0 200 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 AIDAQ96BJ3 306 aa10.45□□□□□ -0.74
SHISA9-204ENST00000566106 KDM6AO15550 1401 aaPredicted RBP10.44□□□□□ -0.74
SHISA9-204ENST00000566106 RNMTO43148 476 aaKnown RBP10.44□□□□□ -0.74
SHISA9-204ENST00000566106 CTCFP49711 727 aaPredicted RBP10.44□□□□□ -0.74
SHISA9-204ENST00000566106 TEFQ10587 303 aa10.44□□□□□ -0.74
SHISA9-204ENST00000566106 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
SHISA9-204ENST00000566106 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
SHISA9-204ENST00000566106 SRP68Q9UHB9 627 aaKnown RBP10.44□□□□□ -0.74
SHISA9-204ENST00000566106 POTECB2RU33 542 aa10.43□□□□□ -0.74
SHISA9-204ENST00000566106 SLC4A2P04920 1241 aa10.43□□□□□ -0.74
SHISA9-204ENST00000566106 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
SHISA9-204ENST00000566106 LGR6Q9HBX8 967 aa10.43□□□□□ -0.74
SHISA9-204ENST00000566106 CNTNAP1P78357 1384 aa10.42□□□□□ -0.74
SHISA9-204ENST00000566106 USP42Q9H9J4 1324 aaKnown RBP10.42□□□□□ -0.74
SHISA9-204ENST00000566106 POLRMTO00411 1230 aaKnown RBP10.42□□□□□ -0.74
SHISA9-204ENST00000566106 CCT4P50991 539 aaKnown RBP10.42□□□□□ -0.74
SHISA9-204ENST00000566106 CHADLQ6NUI6 762 aa10.42□□□□□ -0.74
SHISA9-204ENST00000566106 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
SHISA9-204ENST00000566106 ABHD8Q96I13 439 aa10.42□□□□□ -0.74
SHISA9-204ENST00000566106 BRCA1P38398 1863 aaKnown RBP10.41□□□□□ -0.74
SHISA9-204ENST00000566106 HSP90AB1P08238 724 aaKnown RBP10.41□□□□□ -0.74
SHISA9-204ENST00000566106 LBX1P52954 281 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms