RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GPAMQ9HCL2 828 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 CHD1O14646 1710 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 ATP4AP20648 1035 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 GRIP2Q9C0E4 1043 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 ZNF608Q9ULD9 1512 aaPredicted RBP6.97□□□□□ -1.29
LINC00561-201ENST00000565815 SERTM1A2A2V5 107 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 FOXO3O43524 673 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 B4GALNT3Q6L9W6 998 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 C16orf46Q6P387 395 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 CCDC125Q86Z20 511 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 HELQQ8TDG4 1101 aa6.97□□□□□ -1.29
LINC00561-201ENST00000565815 TSEN34Q9BSV6 310 aaKnown RBP6.97□□□□□ -1.29
LINC00561-201ENST00000565815 CDK2AP1O14519 115 aa6.96□□□□□ -1.29
LINC00561-201ENST00000565815 RNF19AQ9NV58 838 aa6.96□□□□□ -1.3
LINC00561-201ENST00000565815 CLASP1Q7Z460 1538 aa6.96□□□□□ -1.3
LINC00561-201ENST00000565815 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
LINC00561-201ENST00000565815 C7orf43Q8WVR3 580 aa6.95□□□□□ -1.3
LINC00561-201ENST00000565815 HCN2Q9UL51 889 aa6.95□□□□□ -1.3
LINC00561-201ENST00000565815 TTLL8A6PVC2 850 aa6.95□□□□□ -1.3
LINC00561-201ENST00000565815 EIF1AXP47813 144 aaKnown RBP6.95□□□□□ -1.3
LINC00561-201ENST00000565815 POTEAQ6S8J7 498 aa6.95□□□□□ -1.3
LINC00561-201ENST00000565815 SETDB2Q96T68 719 aa6.95□□□□□ -1.3
LINC00561-201ENST00000565815 AAASQ9NRG9 546 aa6.95□□□□□ -1.3
LINC00561-201ENST00000565815 MAGI1Q96QZ7 1491 aaPredicted RBP6.94□□□□□ -1.3
LINC00561-201ENST00000565815 SENP3-EIF4A1A0A087X0R7 540 aa6.94□□□□□ -1.3
LINC00561-201ENST00000565815 THBS1P07996 1170 aa6.94□□□□□ -1.3
LINC00561-201ENST00000565815 RHBDD1Q8TEB9 315 aa6.94□□□□□ -1.3
LINC00561-201ENST00000565815 VTI1AQ96AJ9 217 aa6.94□□□□□ -1.3
LINC00561-201ENST00000565815 AVPP01185 164 aa6.94□□□□□ -1.3
LINC00561-201ENST00000565815 MARSP56192 900 aaKnown RBP6.94□□□□□ -1.3
LINC00561-201ENST00000565815 FKBP4Q02790 459 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC00561-201ENST00000565815 GRIN2CQ14957 1233 aa6.94□□□□□ -1.3
LINC00561-201ENST00000565815 TARBP1Q13395 1621 aaKnown RBP6.94□□□□□ -1.3
LINC00561-201ENST00000565815 POTECB2RU33 542 aa6.93□□□□□ -1.3
LINC00561-201ENST00000565815 MAPK1P28482 360 aa6.93□□□□□ -1.3
LINC00561-201ENST00000565815 RBM25P49756 843 aaKnown RBP6.93□□□□□ -1.3
LINC00561-201ENST00000565815 NBPF10Q6P3W6 841 aaKnown RBP6.93□□□□□ -1.3
LINC00561-201ENST00000565815 NBPF15Q8N660 670 aa6.93□□□□□ -1.3
LINC00561-201ENST00000565815 UNCXA6NJT0 531 aa6.93□□□□□ -1.3
LINC00561-201ENST00000565815 RNF144AP50876 292 aaPredicted RBP6.93□□□□□ -1.3
LINC00561-201ENST00000565815 NPM2Q86SE8 214 aaKnown RBP6.93□□□□□ -1.3
LINC00561-201ENST00000565815 NIFKQ9BYG3 293 aaKnown RBP6.93□□□□□ -1.3
LINC00561-201ENST00000565815 RUBCNLQ9H714 662 aa6.93□□□□□ -1.3
LINC00561-201ENST00000565815 SOS2Q07890 1332 aaPredicted RBP6.93□□□□□ -1.3
LINC00561-201ENST00000565815 AXIN1O15169 862 aa6.92□□□□□ -1.3
LINC00561-201ENST00000565815 FZD6O60353 706 aa6.92□□□□□ -1.3
LINC00561-201ENST00000565815 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
LINC00561-201ENST00000565815 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
LINC00561-201ENST00000565815 TEAD4Q15561 434 aa6.92□□□□□ -1.3
LINC00561-201ENST00000565815 ANKRD33BA6NCL7 494 aa6.92□□□□□ -1.3
LINC00561-201ENST00000565815 ATP13A2Q9NQ11 1180 aa6.91□□□□□ -1.3
LINC00561-201ENST00000565815 STIM2Q9P246 746 aa6.91□□□□□ -1.3
LINC00561-201ENST00000565815 GPR182O15218 404 aa6.91□□□□□ -1.3
LINC00561-201ENST00000565815 UPP2O95045 317 aa6.91□□□□□ -1.3
LINC00561-201ENST00000565815 AAMPQ13685 434 aa6.91□□□□□ -1.3
LINC00561-201ENST00000565815 LYSMD3Q7Z3D4 306 aa6.91□□□□□ -1.3
LINC00561-201ENST00000565815 DNM1Q05193 864 aaKnown RBP6.9□□□□□ -1.3
LINC00561-201ENST00000565815 LRRC69Q6ZNQ3 347 aa6.9□□□□□ -1.3
LINC00561-201ENST00000565815 TMC7Q7Z402 723 aa6.9□□□□□ -1.3
LINC00561-201ENST00000565815 NPAS4Q8IUM7 802 aa6.9□□□□□ -1.3
LINC00561-201ENST00000565815 CUEDC1Q9NWM3 386 aaPredicted RBP6.9□□□□□ -1.3
LINC00561-201ENST00000565815 IGHA2P01877 340 aa6.9□□□□□ -1.31
LINC00561-201ENST00000565815 TREML1Q86YW5 311 aa6.9□□□□□ -1.31
LINC00561-201ENST00000565815 GPR152Q8TDT2 470 aa6.9□□□□□ -1.31
LINC00561-201ENST00000565815 GAS2L1Q99501 681 aaPredicted RBP6.9□□□□□ -1.31
LINC00561-201ENST00000565815 EGFL7Q9UHF1 273 aa6.9□□□□□ -1.31
LINC00561-201ENST00000565815 POLIQ9UNA4 740 aa6.9□□□□□ -1.31
LINC00561-201ENST00000565815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.9□□□□□ -1.31
LINC00561-201ENST00000565815 RGL4Q8IZJ4 473 aa6.89□□□□□ -1.31
LINC00561-201ENST00000565815 GMPR2Q9P2T1 348 aaKnown RBP6.89□□□□□ -1.31
LINC00561-201ENST00000565815 GRIN2BQ13224 1484 aa6.89□□□□□ -1.31
LINC00561-201ENST00000565815 SYNJ2O15056 1496 aa6.89□□□□□ -1.31
LINC00561-201ENST00000565815 AQRO60306 1485 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC00561-201ENST00000565815 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
LINC00561-201ENST00000565815 TRIP4Q15650 581 aaPredicted RBP6.89□□□□□ -1.31
LINC00561-201ENST00000565815 ARSJQ5FYB0 599 aaPredicted RBP6.89□□□□□ -1.31
LINC00561-201ENST00000565815 GNASQ5JWF2 1037 aa6.89□□□□□ -1.31
LINC00561-201ENST00000565815 RHPN1Q8TCX5 695 aa6.89□□□□□ -1.31
LINC00561-201ENST00000565815 COL26A1Q96A83 441 aa6.89□□□□□ -1.31
LINC00561-201ENST00000565815 FAM161BQ96MY7 647 aa6.89□□□□□ -1.31
LINC00561-201ENST00000565815 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
LINC00561-201ENST00000565815 ZAP70P43403 619 aa6.88□□□□□ -1.31
LINC00561-201ENST00000565815 RTN1Q16799 776 aa6.88□□□□□ -1.31
LINC00561-201ENST00000565815 IFT43Q96FT9 208 aa6.88□□□□□ -1.31
LINC00561-201ENST00000565815 GAPVD1Q14C86 1478 aa6.88□□□□□ -1.31
LINC00561-201ENST00000565815 PATL2C9JE40 543 aaKnown RBP6.88□□□□□ -1.31
LINC00561-201ENST00000565815 STAG2Q8N3U4 1231 aa6.88□□□□□ -1.31
LINC00561-201ENST00000565815 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
LINC00561-201ENST00000565815 SOGA1O94964 1423 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 NRG2O14511 850 aaPredicted RBP6.87□□□□□ -1.31
LINC00561-201ENST00000565815 BICDL1Q6ZP65 573 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 EDEM1Q92611 657 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 MYO19Q96H55 970 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 ZCCHC2Q9C0B9 1178 aaKnown RBP6.87□□□□□ -1.31
LINC00561-201ENST00000565815 TIMMDC1Q9NPL8 285 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 WWC3Q9ULE0 1092 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 POLA1P09884 1462 aaPredicted RBP6.87□□□□□ -1.31
LINC00561-201ENST00000565815 MSX1P28360 303 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 GPC1P35052 558 aa6.87□□□□□ -1.31
LINC00561-201ENST00000565815 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms