RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 LGR5O75473 907 aa11.78□□□□□ -0.52
CRTC3-207ENST00000560047 IGFBP4P22692 258 aa11.78□□□□□ -0.52
CRTC3-207ENST00000560047 FAM69CQ0P6D2 419 aa11.78□□□□□ -0.52
CRTC3-207ENST00000560047 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
CRTC3-207ENST00000560047 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
CRTC3-207ENST00000560047 GRIN2AQ12879 1464 aa11.77□□□□□ -0.52
CRTC3-207ENST00000560047 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
CRTC3-207ENST00000560047 WFS1O76024 890 aa11.77□□□□□ -0.53
CRTC3-207ENST00000560047 CSB-PGBD3P0DP91 1061 aa11.77□□□□□ -0.53
CRTC3-207ENST00000560047 WEE1P30291 646 aa11.77□□□□□ -0.53
CRTC3-207ENST00000560047 TREML4Q6UXN2 200 aa11.77□□□□□ -0.53
CRTC3-207ENST00000560047 NANOS1Q8WY41 292 aaKnown RBP11.77□□□□□ -0.53
CRTC3-207ENST00000560047 GPAMQ9HCL2 828 aa11.77□□□□□ -0.53
CRTC3-207ENST00000560047 ZDHHC3Q9NYG2 299 aa11.77□□□□□ -0.53
CRTC3-207ENST00000560047 CUL7Q14999 1698 aa11.76□□□□□ -0.53
CRTC3-207ENST00000560047 TATP17735 454 aaPredicted RBP11.76□□□□□ -0.53
CRTC3-207ENST00000560047 TRIM22Q8IYM9 498 aa11.76□□□□□ -0.53
CRTC3-207ENST00000560047 PGBD3Q8N328 593 aa11.76□□□□□ -0.53
CRTC3-207ENST00000560047 VWA5B2Q8N398 1253 aa11.76□□□□□ -0.53
CRTC3-207ENST00000560047 IRF7Q92985 503 aa11.76□□□□□ -0.53
CRTC3-207ENST00000560047 CHD1O14646 1710 aa11.75□□□□□ -0.53
CRTC3-207ENST00000560047 LOC105371045A0A1W2PR82 267 aa11.75□□□□□ -0.53
CRTC3-207ENST00000560047 EML1O00423 815 aa11.75□□□□□ -0.53
CRTC3-207ENST00000560047 HIRAP54198 1017 aaPredicted RBP11.75□□□□□ -0.53
CRTC3-207ENST00000560047 SV2AQ7L0J3 742 aa11.75□□□□□ -0.53
CRTC3-207ENST00000560047 CUEDC1Q9NWM3 386 aaPredicted RBP11.75□□□□□ -0.53
CRTC3-207ENST00000560047 CDC14CA4D256 554 aa11.74□□□□□ -0.53
CRTC3-207ENST00000560047 DBN1Q16643 649 aa11.74□□□□□ -0.53
CRTC3-207ENST00000560047 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
CRTC3-207ENST00000560047 C2orf49Q9BVC5 232 aaPredicted RBP11.74□□□□□ -0.53
CRTC3-207ENST00000560047 VSIG8P0DPA2 414 aa11.73□□□□□ -0.53
CRTC3-207ENST00000560047 PRIMPOLQ96LW4 560 aa11.73□□□□□ -0.53
CRTC3-207ENST00000560047 RUBCNLQ9H714 662 aa11.73□□□□□ -0.53
CRTC3-207ENST00000560047 PRMT3O60678 531 aa11.72□□□□□ -0.53
CRTC3-207ENST00000560047 ATP4AP20648 1035 aa11.72□□□□□ -0.53
CRTC3-207ENST00000560047 TXLNAP40222 546 aa11.72□□□□□ -0.53
CRTC3-207ENST00000560047 LBRQ14739 615 aaKnown RBP11.72□□□□□ -0.53
CRTC3-207ENST00000560047 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
CRTC3-207ENST00000560047 EFHC2Q5JST6 749 aa11.72□□□□□ -0.53
CRTC3-207ENST00000560047 FOXR1Q6PIV2 292 aa11.72□□□□□ -0.53
CRTC3-207ENST00000560047 CLP1Q92989 425 aaKnown RBP11.72□□□□□ -0.53
CRTC3-207ENST00000560047 NUCKS1Q9H1E3 243 aaKnown RBP11.72□□□□□ -0.53
CRTC3-207ENST00000560047 CRISPLD1Q9H336 500 aa11.72□□□□□ -0.53
CRTC3-207ENST00000560047 HCN4Q9Y3Q4 1203 aa11.72□□□□□ -0.53
CRTC3-207ENST00000560047 NUP160Q12769 1436 aa11.71□□□□□ -0.53
CRTC3-207ENST00000560047 FOXO3O43524 673 aa11.71□□□□□ -0.53
CRTC3-207ENST00000560047 SH3PXD2AQ5TCZ1 1133 aa11.71□□□□□ -0.53
CRTC3-207ENST00000560047 C1orf53Q5VUE5 145 aa11.71□□□□□ -0.53
CRTC3-207ENST00000560047 CEP170Q5SW79 1584 aa11.71□□□□□ -0.54
CRTC3-207ENST00000560047 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
CRTC3-207ENST00000560047 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
CRTC3-207ENST00000560047 VTI1AQ96AJ9 217 aa11.7□□□□□ -0.54
CRTC3-207ENST00000560047 ZNF837Q96EG3 531 aaPredicted RBP11.7□□□□□ -0.54
CRTC3-207ENST00000560047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.7□□□□□ -0.54
CRTC3-207ENST00000560047 KIF21BO75037 1637 aa11.69□□□□□ -0.54
CRTC3-207ENST00000560047 OCLNQ16625 522 aa11.69□□□□□ -0.54
CRTC3-207ENST00000560047 ZIC5Q96T25 663 aa11.69□□□□□ -0.54
CRTC3-207ENST00000560047 GPC6Q9Y625 555 aaPredicted RBP11.69□□□□□ -0.54
CRTC3-207ENST00000560047 A0A1W2PNR3 127 aa11.68□□□□□ -0.54
CRTC3-207ENST00000560047 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
CRTC3-207ENST00000560047 NLRP8Q86W28 1048 aa11.68□□□□□ -0.54
CRTC3-207ENST00000560047 ALDH16A1Q8IZ83 802 aa11.68□□□□□ -0.54
CRTC3-207ENST00000560047 PHACTR1Q9C0D0 580 aa11.68□□□□□ -0.54
CRTC3-207ENST00000560047 LCE2AQ5TA79 106 aaPredicted RBP11.67□□□□□ -0.54
CRTC3-207ENST00000560047 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
CRTC3-207ENST00000560047 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
CRTC3-207ENST00000560047 GTPBP3Q969Y2 492 aaKnown RBP11.67□□□□□ -0.54
CRTC3-207ENST00000560047 NEUROD4Q9HD90 331 aa11.67□□□□□ -0.54
CRTC3-207ENST00000560047 CXXC1Q9P0U4 656 aaPredicted RBP11.67□□□□□ -0.54
CRTC3-207ENST00000560047 USTQ9Y2C2 406 aa11.67□□□□□ -0.54
CRTC3-207ENST00000560047 GJA3Q9Y6H8 435 aa11.67□□□□□ -0.54
CRTC3-207ENST00000560047 GOLGA3Q08378 1498 aa11.67□□□□□ -0.54
CRTC3-207ENST00000560047 PDE4CQ08493 712 aa11.66□□□□□ -0.54
CRTC3-207ENST00000560047 FIGNL1Q6PIW4 674 aa11.66□□□□□ -0.54
CRTC3-207ENST00000560047 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
CRTC3-207ENST00000560047 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
CRTC3-207ENST00000560047 TRERF1Q96PN7 1200 aa11.66□□□□□ -0.54
CRTC3-207ENST00000560047 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.54
CRTC3-207ENST00000560047 ATP2B4P23634 1241 aa11.65□□□□□ -0.54
CRTC3-207ENST00000560047 RANGAP1P46060 587 aaPredicted RBP11.65□□□□□ -0.54
CRTC3-207ENST00000560047 FKBP5Q13451 457 aaPredicted RBP11.65□□□□□ -0.54
CRTC3-207ENST00000560047 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.55
CRTC3-207ENST00000560047 THBS1P07996 1170 aa11.64□□□□□ -0.55
CRTC3-207ENST00000560047 LCE2CQ5TA81 110 aa11.64□□□□□ -0.55
CRTC3-207ENST00000560047 SLAIN2Q9P270 581 aa11.64□□□□□ -0.55
CRTC3-207ENST00000560047 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
CRTC3-207ENST00000560047 GMPRP36959 345 aa11.63□□□□□ -0.55
CRTC3-207ENST00000560047 RTN1Q16799 776 aa11.63□□□□□ -0.55
CRTC3-207ENST00000560047 ZCCHC2Q9C0B9 1178 aaKnown RBP11.63□□□□□ -0.55
CRTC3-207ENST00000560047 PHF24Q9UPV7 400 aa11.63□□□□□ -0.55
CRTC3-207ENST00000560047 PCDHGC4Q9Y5F7 938 aa11.63□□□□□ -0.55
CRTC3-207ENST00000560047 UBAP2LQ14157 1087 aaKnown RBP11.62□□□□□ -0.55
CRTC3-207ENST00000560047 HIF1AQ16665 826 aa11.62□□□□□ -0.55
CRTC3-207ENST00000560047 RETREG2Q8NC44 543 aa11.62□□□□□ -0.55
CRTC3-207ENST00000560047 COL26A1Q96A83 441 aa11.62□□□□□ -0.55
CRTC3-207ENST00000560047 CFHR5Q9BXR6 569 aa11.62□□□□□ -0.55
CRTC3-207ENST00000560047 GPR25O00155 361 aa11.61□□□□□ -0.55
CRTC3-207ENST00000560047 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
CRTC3-207ENST00000560047 LRRC69Q6ZNQ3 347 aa11.61□□□□□ -0.55
CRTC3-207ENST00000560047 COL25A1Q9BXS0 654 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms