RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 AEBP2Q6ZN18 517 aaPredicted RBP33.01■■■□□ 2.87
CRTC3-207ENST00000560047 CHIC1Q5VXU3 224 aa32.32■■■□□ 2.76
CRTC3-207ENST00000560047 PHF23Q9BUL5 403 aaPredicted RBP28.4■■■□□ 2.14
CRTC3-207ENST00000560047 SENP3Q9H4L4 574 aaPredicted RBP28.08■■■□□ 2.09
CRTC3-207ENST00000560047 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
CRTC3-207ENST00000560047 FOXD1Q16676 465 aa26.02■■□□□ 1.76
CRTC3-207ENST00000560047 ADRA2BP18089 450 aa25.05■■□□□ 1.6
CRTC3-207ENST00000560047 PPP6R1Q9UPN7 881 aa25.05■■□□□ 1.6
CRTC3-207ENST00000560047 PIAS4Q8N2W9 510 aaPredicted RBP24.55■■□□□ 1.52
CRTC3-207ENST00000560047 MSH5O43196 834 aa24.03■■□□□ 1.44
CRTC3-207ENST00000560047 PPP4R3CPQ6ZMV5 832 aa23.15■■□□□ 1.3
CRTC3-207ENST00000560047 SCAF1Q9H7N4 1312 aaKnown RBP23.01■■□□□ 1.27
CRTC3-207ENST00000560047 MAPK8IP2Q13387 824 aaPredicted RBP22.71■■□□□ 1.23
CRTC3-207ENST00000560047 KCNA4P22459 653 aa22.63■■□□□ 1.21
CRTC3-207ENST00000560047 NCBP3Q53F19 620 aaKnown RBP22.62■■□□□ 1.21
CRTC3-207ENST00000560047 CNKSR2Q8WXI2 1034 aa22.51■■□□□ 1.19
CRTC3-207ENST00000560047 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
CRTC3-207ENST00000560047 NPM3O75607 178 aaKnown RBP22.21■■□□□ 1.15
CRTC3-207ENST00000560047 RNF216Q9NWF9 866 aaPredicted RBP22.06■■□□□ 1.12
CRTC3-207ENST00000560047 HOXD11P31277 338 aaPredicted RBP21.95■■□□□ 1.1
CRTC3-207ENST00000560047 POTEDQ86YR6 584 aa21.77■■□□□ 1.08
CRTC3-207ENST00000560047 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
CRTC3-207ENST00000560047 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
CRTC3-207ENST00000560047 DCAF8L1A6NGE4 600 aa21.45■■□□□ 1.02
CRTC3-207ENST00000560047 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
CRTC3-207ENST00000560047 SLC4A2P04920 1241 aa20.95■□□□□ 0.94
CRTC3-207ENST00000560047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.95■□□□□ 0.94
CRTC3-207ENST00000560047 FOXD4L1Q9NU39 408 aa20.84■□□□□ 0.93
CRTC3-207ENST00000560047 ZBTB22O15209 634 aa20.78■□□□□ 0.92
CRTC3-207ENST00000560047 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
CRTC3-207ENST00000560047 RNF39Q9H2S5 420 aa20.56■□□□□ 0.88
CRTC3-207ENST00000560047 U3KPZ7 1027 aaPredicted RBP20.56■□□□□ 0.88
CRTC3-207ENST00000560047 MYCNP04198 464 aaPredicted RBP20.55■□□□□ 0.88
CRTC3-207ENST00000560047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
CRTC3-207ENST00000560047 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
CRTC3-207ENST00000560047 C1QBPQ07021 282 aaKnown RBP20.36■□□□□ 0.85
CRTC3-207ENST00000560047 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
CRTC3-207ENST00000560047 APLP2Q06481 763 aa20.2■□□□□ 0.82
CRTC3-207ENST00000560047 ATXN8OSP0DMR3 200 aa20.15■□□□□ 0.82
CRTC3-207ENST00000560047 CACNB1Q02641 598 aaPredicted RBP20.03■□□□□ 0.8
CRTC3-207ENST00000560047 SPINK5Q9NQ38 1064 aaPredicted RBP19.98■□□□□ 0.79
CRTC3-207ENST00000560047 CAPN15O75808 1086 aa19.94■□□□□ 0.78
CRTC3-207ENST00000560047 ATF5Q9Y2D1 282 aaPredicted RBP19.94■□□□□ 0.78
CRTC3-207ENST00000560047 ZNF219Q9P2Y4 722 aaPredicted RBP19.87■□□□□ 0.77
CRTC3-207ENST00000560047 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
CRTC3-207ENST00000560047 DSG3P32926 999 aa19.57■□□□□ 0.72
CRTC3-207ENST00000560047 POLA2Q14181 598 aa19.54■□□□□ 0.72
CRTC3-207ENST00000560047 ABCB7O75027 752 aa19.52■□□□□ 0.72
CRTC3-207ENST00000560047 ZBTB12Q9Y330 459 aaPredicted RBP19.26■□□□□ 0.67
CRTC3-207ENST00000560047 FBLN2P98095 1184 aa19.19■□□□□ 0.66
CRTC3-207ENST00000560047 MKRN4PQ13434 485 aaPredicted RBP19.09■□□□□ 0.65
CRTC3-207ENST00000560047 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
CRTC3-207ENST00000560047 FKBP8Q14318 412 aa18.76■□□□□ 0.59
CRTC3-207ENST00000560047 SPDYE2BA6NHP3 402 aa18.72■□□□□ 0.59
CRTC3-207ENST00000560047 SPDYE4A6NLX3 237 aa18.72■□□□□ 0.59
CRTC3-207ENST00000560047 SPDYE6P0CI01 402 aa18.72■□□□□ 0.59
CRTC3-207ENST00000560047 SPDYE2Q495Y8 402 aa18.72■□□□□ 0.59
CRTC3-207ENST00000560047 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
CRTC3-207ENST00000560047 ZNF692Q9BU19 519 aaPredicted RBP18.66■□□□□ 0.58
CRTC3-207ENST00000560047 SSUH2Q9Y2M2 353 aa18.54■□□□□ 0.56
CRTC3-207ENST00000560047 AKT1S1Q96B36 256 aa18.47■□□□□ 0.55
CRTC3-207ENST00000560047 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
CRTC3-207ENST00000560047 PROM2Q8N271 834 aa18.39■□□□□ 0.53
CRTC3-207ENST00000560047 REM2Q8IYK8 340 aaPredicted RBP18.27■□□□□ 0.52
CRTC3-207ENST00000560047 SPDYE1Q8NFV5 336 aaPredicted RBP18.17■□□□□ 0.5
CRTC3-207ENST00000560047 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
CRTC3-207ENST00000560047 FBXO3Q9UK99 471 aa18.15■□□□□ 0.5
CRTC3-207ENST00000560047 CLEC11AQ9Y240 323 aa18.07■□□□□ 0.48
CRTC3-207ENST00000560047 PITPNM1O00562 1244 aa18.03■□□□□ 0.48
CRTC3-207ENST00000560047 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
CRTC3-207ENST00000560047 CHRDL2Q6WN34 429 aa17.88■□□□□ 0.45
CRTC3-207ENST00000560047 VASPP50552 380 aaPredicted RBP17.84■□□□□ 0.45
CRTC3-207ENST00000560047 MIER1Q8N108 512 aa17.79■□□□□ 0.44
CRTC3-207ENST00000560047 PLCD3Q8N3E9 789 aa17.75■□□□□ 0.43
CRTC3-207ENST00000560047 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
CRTC3-207ENST00000560047 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
CRTC3-207ENST00000560047 CREBZFQ9NS37 354 aa17.67■□□□□ 0.42
CRTC3-207ENST00000560047 PIP4P2Q8N4L2 257 aa17.64■□□□□ 0.41
CRTC3-207ENST00000560047 PRKAR2AP13861 404 aaKnown RBP17.6■□□□□ 0.41
CRTC3-207ENST00000560047 CHADLQ6NUI6 762 aa17.59■□□□□ 0.41
CRTC3-207ENST00000560047 IFNLR1Q8IU57 520 aaPredicted RBP17.59■□□□□ 0.41
CRTC3-207ENST00000560047 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
CRTC3-207ENST00000560047 KLHL34Q8N239 644 aa17.58■□□□□ 0.4
CRTC3-207ENST00000560047 MNX1P50219 401 aaPredicted RBP17.48■□□□□ 0.39
CRTC3-207ENST00000560047 FARP1Q9Y4F1 1045 aaPredicted RBP17.46■□□□□ 0.39
CRTC3-207ENST00000560047 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
CRTC3-207ENST00000560047 SPOCK2Q92563 424 aa17.41■□□□□ 0.38
CRTC3-207ENST00000560047 NUBP1P53384 320 aa17.28■□□□□ 0.36
CRTC3-207ENST00000560047 POTEHQ6S545 545 aa17.27■□□□□ 0.36
CRTC3-207ENST00000560047 RASEFQ8IZ41 740 aa17.19■□□□□ 0.34
CRTC3-207ENST00000560047 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
CRTC3-207ENST00000560047 FAM212AQ96EL1 285 aa17.17■□□□□ 0.34
CRTC3-207ENST00000560047 DCAF8Q5TAQ9 597 aa17.15■□□□□ 0.34
CRTC3-207ENST00000560047 GSE1Q14687 1217 aa17.14■□□□□ 0.33
CRTC3-207ENST00000560047 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
CRTC3-207ENST00000560047 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
CRTC3-207ENST00000560047 HAX1O00165 279 aa17.11■□□□□ 0.33
CRTC3-207ENST00000560047 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
CRTC3-207ENST00000560047 C19orf67A6NJJ6 358 aa17.1■□□□□ 0.33
CRTC3-207ENST00000560047 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms