RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 MKI67P46013 3256 aaKnown RBP6.14□□□□□ -1.43
ATXN3-242ENST00000556644 NRXN2Q9P2S2 1712 aa6.13□□□□□ -1.43
ATXN3-242ENST00000556644 CACNA1SQ13698 1873 aa6.13□□□□□ -1.43
ATXN3-242ENST00000556644 COL6A3P12111 3177 aa6.13□□□□□ -1.43
ATXN3-242ENST00000556644 PTCD1O75127 700 aaKnown RBP6.13□□□□□ -1.43
ATXN3-242ENST00000556644 LMOD1P29536 600 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-242ENST00000556644 HUNKP57058 714 aa6.13□□□□□ -1.43
ATXN3-242ENST00000556644 DLK2Q6UY11 383 aa6.13□□□□□ -1.43
ATXN3-242ENST00000556644 SLX4Q8IY92 1834 aa6.13□□□□□ -1.43
ATXN3-242ENST00000556644 ANKRD31Q8N7Z5 1873 aa6.13□□□□□ -1.43
ATXN3-242ENST00000556644 FAM155AB1AL88 458 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-242ENST00000556644 SCNN1DP51172 638 aa6.12□□□□□ -1.43
ATXN3-242ENST00000556644 NKX1-1Q15270 411 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-242ENST00000556644 GPC2Q8N158 579 aa6.12□□□□□ -1.43
ATXN3-242ENST00000556644 TMC1Q8TDI8 760 aa6.12□□□□□ -1.43
ATXN3-242ENST00000556644 OTUD5Q96G74 571 aa6.12□□□□□ -1.43
ATXN3-242ENST00000556644 HHIPL1Q96JK4 782 aa6.12□□□□□ -1.43
ATXN3-242ENST00000556644 RBM27Q9P2N5 1060 aaKnown RBP6.12□□□□□ -1.43
ATXN3-242ENST00000556644 INSRP06213 1382 aa6.11□□□□□ -1.43
ATXN3-242ENST00000556644 EN2P19622 333 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-242ENST00000556644 PKN2Q16513 984 aaKnown RBP6.11□□□□□ -1.43
ATXN3-242ENST00000556644 FBXO46Q6PJ61 603 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-242ENST00000556644 PIP4P2Q8N4L2 257 aa6.11□□□□□ -1.43
ATXN3-242ENST00000556644 ZNF296Q8WUU4 475 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-242ENST00000556644 BCL2L12Q9HB09 334 aa6.11□□□□□ -1.43
ATXN3-242ENST00000556644 FZD9O00144 591 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 SOX1O00570 391 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-242ENST00000556644 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 COL9A1P20849 921 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 FKBP4Q02790 459 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATXN3-242ENST00000556644 CCDC93Q567U6 631 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 HSP90AB2PQ58FF8 381 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 RGMBQ6NW40 437 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 INTS5Q6P9B9 1019 aaKnown RBP6.1□□□□□ -1.43
ATXN3-242ENST00000556644 LRCH3Q96II8 777 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 CSRNP1Q96S65 589 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 PRDM6Q9NQX0 595 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 SPG7Q9UQ90 795 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 PAPPA2Q9BXP8 1791 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 COL4A5P29400 1685 aa6.1□□□□□ -1.43
ATXN3-242ENST00000556644 KIAA0100Q14667 2235 aaKnown RBP6.1□□□□□ -1.43
ATXN3-242ENST00000556644 EDC4Q6P2E9 1401 aaKnown RBP6.09□□□□□ -1.43
ATXN3-242ENST00000556644 RTL1A6NKG5 1358 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 SOS1Q07889 1333 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-242ENST00000556644 TJP1Q07157 1748 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 PHKG2P15735 406 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 PDE6BP35913 854 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
ATXN3-242ENST00000556644 ZNF157P51786 506 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-242ENST00000556644 SOGA3Q5TF21 947 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 PRR5LQ6MZQ0 368 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 USP50Q70EL3 339 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-242ENST00000556644 HDGFL2Q7Z4V5 671 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-242ENST00000556644 CNKSR1Q969H4 720 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 SLC12A5Q9H2X9 1139 aa6.09□□□□□ -1.43
ATXN3-242ENST00000556644 BCORQ6W2J9 1755 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 A0A1W2PP64 1363 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 COL15A1P39059 1388 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 ZNF831Q5JPB2 1677 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 AKAP11Q9UKA4 1901 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 EIF6P56537 245 aaKnown RBP6.08□□□□□ -1.44
ATXN3-242ENST00000556644 DNAJC10Q8IXB1 793 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 COG3Q96JB2 828 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 BRIP1Q9BX63 1249 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 NARFQ9UHQ1 456 aa6.08□□□□□ -1.44
ATXN3-242ENST00000556644 NPHP1O15259 732 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 SRGNP10124 158 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 TBC1D9BQ66K14 1250 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 STYK1Q6J9G0 422 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 Q7L0L9 218 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 USP48Q86UV5 1035 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 IFNL2Q8IZJ0 200 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 C7orf43Q8WVR3 580 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 JDP2Q8WYK2 163 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 STAC3Q96MF2 364 aa6.07□□□□□ -1.44
ATXN3-242ENST00000556644 SLC10A3P09131 477 aa6.06□□□□□ -1.44
ATXN3-242ENST00000556644 SLC51AQ86UW1 340 aa6.06□□□□□ -1.44
ATXN3-242ENST00000556644 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATXN3-242ENST00000556644 TRPM4Q8TD43 1214 aa6.06□□□□□ -1.44
ATXN3-242ENST00000556644 CCDC102AQ96A19 550 aa6.06□□□□□ -1.44
ATXN3-242ENST00000556644 MASTLQ96GX5 879 aa6.06□□□□□ -1.44
ATXN3-242ENST00000556644 GBA2Q9HCG7 927 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-242ENST00000556644 ADARB2Q9NS39 739 aaKnown RBP6.06□□□□□ -1.44
ATXN3-242ENST00000556644 ZBTB1Q9Y2K1 713 aa6.06□□□□□ -1.44
ATXN3-242ENST00000556644 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
ATXN3-242ENST00000556644 ARFGEF2Q9Y6D5 1785 aa6.06□□□□□ -1.44
ATXN3-242ENST00000556644 SHTN1A0MZ66 631 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 GPR25O00155 361 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 MYCP01106 439 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-242ENST00000556644 PLA2G5P39877 138 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 HIRAP54198 1017 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-242ENST00000556644 CABP4P57796 275 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 EVX2Q03828 476 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 CNBD1Q8NA66 436 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 R3HDMLQ9H3Y0 253 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 GPRC5DQ9NZD1 345 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 PDZRN3Q9UPQ7 1066 aa6.05□□□□□ -1.44
ATXN3-242ENST00000556644 BRCA2P51587 3418 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 ADM5C9JUS6 153 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 CANXP27824 592 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms