RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 SNRPA1P09661 255 aaKnown RBP5.13□□□□□ -1.59
LINC00648-202ENST00000555985 DDR1Q08345 913 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 SYT17Q9BSW7 474 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 FHDC1Q9C0D6 1143 aaPredicted RBP5.13□□□□□ -1.59
LINC00648-202ENST00000555985 USP16Q9Y5T5 823 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 RIC1Q4ADV7 1423 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 ATP10DQ9P241 1426 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 IL16Q14005 1332 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 ERBB4Q15303 1308 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 CHD4Q14839 1912 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 CACNA1FO60840 1977 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 POLRMTO00411 1230 aaKnown RBP5.13□□□□□ -1.59
LINC00648-202ENST00000555985 LMOD3Q0VAK6 560 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 TRAPPC3LQ5T215 181 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 RTF1Q92541 710 aaKnown RBP5.13□□□□□ -1.59
LINC00648-202ENST00000555985 CFAP44Q96MT7 982 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 CD2APQ9Y5K6 639 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 MAPK8IP3Q9UPT6 1336 aa5.13□□□□□ -1.59
LINC00648-202ENST00000555985 IBTKQ9P2D0 1353 aaPredicted RBP5.12□□□□□ -1.59
LINC00648-202ENST00000555985 HOXB7P09629 217 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 KCNA3P22001 575 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 WDR43Q15061 677 aaKnown RBP eCLIP5.12□□□□□ -1.59
LINC00648-202ENST00000555985 IFT57Q9NWB7 429 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 MIS18AQ9NYP9 233 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 LRRC37AA6NMS7 1700 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 SNED1Q8TER0 1413 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 CCER2I3L3R5 266 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 APAF1O14727 1248 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 ANP32CO43423 234 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 STARD3NLO95772 234 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 A1BGP04217 495 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 EVX2Q03828 476 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 TTC5Q8N0Z6 440 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 PCDH10Q9P2E7 1040 aa5.12□□□□□ -1.59
LINC00648-202ENST00000555985 SRP68Q9UHB9 627 aaKnown RBP5.12□□□□□ -1.59
LINC00648-202ENST00000555985 FER1L6Q2WGJ9 1857 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 PHF14O94880 888 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 WWC1Q8IX03 1113 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 REM2Q8IYK8 340 aaPredicted RBP5.11□□□□□ -1.59
LINC00648-202ENST00000555985 NLGN1Q8N2Q7 840 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 NLGN2Q8NFZ4 835 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 MBIPQ9NS73 344 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 RRP7AQ9Y3A4 280 aaKnown RBP5.11□□□□□ -1.59
LINC00648-202ENST00000555985 SBF1O95248 1867 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 HAX1O00165 279 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 MSL1Q68DK7 614 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 CARMIL3Q8ND23 1372 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 LTBP1Q14766 1721 aa5.11□□□□□ -1.59
LINC00648-202ENST00000555985 A0A087WZG4 1122 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 KLRG2A4D1S0 409 aaPredicted RBP5.1□□□□□ -1.59
LINC00648-202ENST00000555985 NFIXQ14938 502 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 USPL1Q5W0Q7 1092 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 ADCY9O60503 1353 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 ERVV-1B6SEH8 477 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 NEFLP07196 543 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 MMP10P09238 476 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 RFC4P35249 363 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 CLEC4GQ6UXB4 293 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 TRMT2AQ8IZ69 625 aaKnown RBP5.1□□□□□ -1.59
LINC00648-202ENST00000555985 NGEFQ8N5V2 710 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 MRS2Q9HD23 443 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 DICER1Q9UPY3 1922 aaKnown RBP5.1□□□□□ -1.59
LINC00648-202ENST00000555985 COL4A1P02462 1669 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 POLD1P28340 1107 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 TGFB2P61812 414 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 KRT24Q2M2I5 525 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 PROSER3Q2NL68 480 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 TBC1D9BQ66K14 1250 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 WDR63Q8IWG1 891 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 CCDC136Q96JN2 1154 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 TSPYL4Q9UJ04 414 aa5.1□□□□□ -1.59
LINC00648-202ENST00000555985 CACNA1SQ13698 1873 aa5.09□□□□□ -1.59
LINC00648-202ENST00000555985 YBX3P16989 372 aaKnown RBP eCLIP5.09□□□□□ -1.59
LINC00648-202ENST00000555985 A0A1B0GUL6 1792 aa5.09□□□□□ -1.6
LINC00648-202ENST00000555985 TIAM2Q8IVF5 1701 aa5.09□□□□□ -1.6
LINC00648-202ENST00000555985 MAP3K15Q6ZN16 1313 aa5.09□□□□□ -1.6
LINC00648-202ENST00000555985 NEFMP07197 916 aa5.09□□□□□ -1.6
LINC00648-202ENST00000555985 GNAI1P63096 354 aa5.09□□□□□ -1.6
LINC00648-202ENST00000555985 ZNF34Q8IZ26 560 aa5.09□□□□□ -1.6
LINC00648-202ENST00000555985 ZNF646O15015 1829 aaPredicted RBP5.08□□□□□ -1.6
LINC00648-202ENST00000555985 SLX4Q8IY92 1834 aa5.08□□□□□ -1.6
LINC00648-202ENST00000555985 UBN2Q6ZU65 1347 aa5.08□□□□□ -1.6
LINC00648-202ENST00000555985 CANXP27824 592 aaKnown RBP5.08□□□□□ -1.6
LINC00648-202ENST00000555985 HLFQ16534 295 aa5.08□□□□□ -1.6
LINC00648-202ENST00000555985 C8orf58Q8NAV2 365 aa5.08□□□□□ -1.6
LINC00648-202ENST00000555985 PIP4K2AP48426 406 aaPredicted RBP5.08□□□□□ -1.6
LINC00648-202ENST00000555985 CALD1Q05682 793 aaKnown RBP5.08□□□□□ -1.6
LINC00648-202ENST00000555985 TTLL7Q6ZT98 887 aa5.08□□□□□ -1.6
LINC00648-202ENST00000555985 DZIP3Q86Y13 1208 aaKnown RBP5.08□□□□□ -1.6
LINC00648-202ENST00000555985 SPDYE1Q8NFV5 336 aaPredicted RBP5.08□□□□□ -1.6
LINC00648-202ENST00000555985 DDX21Q9NR30 783 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC00648-202ENST00000555985 ZPR1O75312 459 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 DUSP27Q5VZP5 1158 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 PRR5LQ6MZQ0 368 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 TSPYL6Q8N831 410 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 TBC1D2BQ9UPU7 963 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 MYH3P11055 1940 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 NTSR2O95665 410 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 SERPINB2P05120 415 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 CRY2Q49AN0 593 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms