RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 LTN1O94822 1766 aa9.67□□□□□ -0.86
NECAP1-204ENST00000540083 COL5A2P05997 1499 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-204ENST00000540083 ATRNO75882 1429 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 PARD3Q8TEW0 1356 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
NECAP1-204ENST00000540083 SPATA31A5Q5VU36 1347 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 SPATA31A7Q8IWB4 1347 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
NECAP1-204ENST00000540083 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
NECAP1-204ENST00000540083 CNGB1Q14028 1251 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-204ENST00000540083 BARGINQ6ZT62 677 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 NLRP2Q9NX02 1062 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 PLCH1Q4KWH8 1693 aa9.66□□□□□ -0.86
NECAP1-204ENST00000540083 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-204ENST00000540083 LMO7Q8WWI1 1683 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 FAM208AQ9UK61 1670 aaKnown RBP9.65□□□□□ -0.86
NECAP1-204ENST00000540083 CAMTA1Q9Y6Y1 1673 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 SPATA31A1Q5TZJ5 1347 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 RNF123Q5XPI4 1314 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 ZBED9Q6R2W3 1325 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 RCCD1A6NED2 376 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 MS4A1P11836 297 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 PPP2R1AP30153 589 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 HSP90AB2PQ58FF8 381 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 LARP1Q6PKG0 1096 aaKnown RBP9.65□□□□□ -0.86
NECAP1-204ENST00000540083 SLF2Q8IX21 1173 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 TMEM134Q9H6X4 195 aa9.65□□□□□ -0.86
NECAP1-204ENST00000540083 PRKRIP1Q9H875 184 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-204ENST00000540083 PLEKHG2Q9H7P9 1386 aa9.64□□□□□ -0.87
NECAP1-204ENST00000540083 A0A0G2JS52 829 aa9.64□□□□□ -0.87
NECAP1-204ENST00000540083 RNF40O75150 1001 aa9.64□□□□□ -0.87
NECAP1-204ENST00000540083 SLC4A3P48751 1232 aa9.64□□□□□ -0.87
NECAP1-204ENST00000540083 METTL3Q86U44 580 aaKnown RBP9.64□□□□□ -0.87
NECAP1-204ENST00000540083 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
NECAP1-204ENST00000540083 LTV1Q96GA3 475 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-204ENST00000540083 COL18A1P39060 1754 aa9.64□□□□□ -0.87
NECAP1-204ENST00000540083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
NECAP1-204ENST00000540083 EXOC5O00471 708 aa9.63□□□□□ -0.87
NECAP1-204ENST00000540083 IL2RBP14784 551 aa9.63□□□□□ -0.87
NECAP1-204ENST00000540083 FBLN1P23142 703 aa9.63□□□□□ -0.87
NECAP1-204ENST00000540083 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
NECAP1-204ENST00000540083 HSP90AA2PQ14568 343 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-204ENST00000540083 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-204ENST00000540083 NRAPQ86VF7 1730 aa9.62□□□□□ -0.87
NECAP1-204ENST00000540083 TCERG1O14776 1098 aaKnown RBP9.62□□□□□ -0.87
NECAP1-204ENST00000540083 TATP17735 454 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-204ENST00000540083 FGD1P98174 961 aa9.62□□□□□ -0.87
NECAP1-204ENST00000540083 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
NECAP1-204ENST00000540083 AAMPQ13685 434 aa9.62□□□□□ -0.87
NECAP1-204ENST00000540083 EIF4A2Q14240 407 aaKnown RBP9.62□□□□□ -0.87
NECAP1-204ENST00000540083 IFFO2Q5TF58 517 aa9.62□□□□□ -0.87
NECAP1-204ENST00000540083 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
NECAP1-204ENST00000540083 DDB1Q16531 1140 aa9.61□□□□□ -0.87
NECAP1-204ENST00000540083 AMOTQ4VCS5 1084 aa9.61□□□□□ -0.87
NECAP1-204ENST00000540083 POTEAQ6S8J7 498 aa9.61□□□□□ -0.87
NECAP1-204ENST00000540083 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-204ENST00000540083 HSP90AA1P07900 732 aaKnown RBP9.6□□□□□ -0.87
NECAP1-204ENST00000540083 IL13P35225 146 aa9.6□□□□□ -0.87
NECAP1-204ENST00000540083 WDR43Q15061 677 aaKnown RBP eCLIP9.6□□□□□ -0.87
NECAP1-204ENST00000540083 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
NECAP1-204ENST00000540083 NBPF6Q5VWK0 638 aa9.6□□□□□ -0.87
NECAP1-204ENST00000540083 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
NECAP1-204ENST00000540083 NBPF4Q96M43 638 aa9.6□□□□□ -0.87
NECAP1-204ENST00000540083 BRPF3Q9ULD4 1205 aa9.6□□□□□ -0.87
NECAP1-204ENST00000540083 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
NECAP1-204ENST00000540083 IGSF1Q8N6C5 1336 aa9.59□□□□□ -0.87
NECAP1-204ENST00000540083 U2SURPO15042 1029 aaKnown RBP9.59□□□□□ -0.87
NECAP1-204ENST00000540083 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
NECAP1-204ENST00000540083 PLEKHO1Q53GL0 409 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-204ENST00000540083 RGPD5Q99666 1765 aa9.59□□□□□ -0.87
NECAP1-204ENST00000540083 HSP90AB1P08238 724 aaKnown RBP9.58□□□□□ -0.88
NECAP1-204ENST00000540083 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-204ENST00000540083 APLP1P51693 650 aa9.58□□□□□ -0.88
NECAP1-204ENST00000540083 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
NECAP1-204ENST00000540083 PDE4CQ08493 712 aa9.58□□□□□ -0.88
NECAP1-204ENST00000540083 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
NECAP1-204ENST00000540083 SULT6B1Q6IMI4 303 aa9.58□□□□□ -0.88
NECAP1-204ENST00000540083 KRT27Q7Z3Y8 459 aa9.58□□□□□ -0.88
NECAP1-204ENST00000540083 ZCRB1Q8TBF4 217 aaKnown RBP9.58□□□□□ -0.88
NECAP1-204ENST00000540083 PEAK1Q9H792 1746 aa9.57□□□□□ -0.88
NECAP1-204ENST00000540083 IRF6O14896 467 aa9.57□□□□□ -0.88
NECAP1-204ENST00000540083 HNRNPUQ00839 825 aaKnown RBP eCLIP9.57□□□□□ -0.88
NECAP1-204ENST00000540083 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
NECAP1-204ENST00000540083 PHOX2BQ99453 314 aa9.57□□□□□ -0.88
NECAP1-204ENST00000540083 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 OVOS2A0A0G2JMS6 1433 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 GLI3P10071 1580 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 KDRP35968 1356 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 TPM2P07951 284 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 NCLP19338 710 aaKnown RBP9.56□□□□□ -0.88
NECAP1-204ENST00000540083 CLCN1P35523 988 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 C1orf141Q5JVX7 400 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
NECAP1-204ENST00000540083 KCNC4Q03721 635 aa9.55□□□□□ -0.88
NECAP1-204ENST00000540083 SF3B2Q13435 895 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms