RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 MYT1Q01538 1121 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 RBL2Q08999 1139 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 TRIM32Q13049 653 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 C11orf91Q3C1V1 193 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 CDK15Q96Q40 435 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 ZAP70P43403 619 aa12.9□□□□□ -0.34
CD9-207ENST00000538418 WNT7BP56706 349 aa12.9□□□□□ -0.34
CD9-207ENST00000538418 ZNF394Q53GI3 561 aa12.9□□□□□ -0.34
CD9-207ENST00000538418 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
CD9-207ENST00000538418 PMFBP1Q8TBY8 1022 aa12.89□□□□□ -0.35
CD9-207ENST00000538418 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
CD9-207ENST00000538418 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
CD9-207ENST00000538418 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 EML1O00423 815 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 EIF1AYO14602 144 aaKnown RBP12.88□□□□□ -0.35
CD9-207ENST00000538418 GRM5P41594 1212 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
CD9-207ENST00000538418 ORC1Q13415 861 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 DGKZQ13574 1117 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 ZNF662Q6ZS27 426 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 PCDHGB7Q9Y5F8 929 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
CD9-207ENST00000538418 TLR1Q15399 786 aa12.87□□□□□ -0.35
CD9-207ENST00000538418 RTN1Q16799 776 aa12.87□□□□□ -0.35
CD9-207ENST00000538418 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
CD9-207ENST00000538418 ALDH16A1Q8IZ83 802 aa12.87□□□□□ -0.35
CD9-207ENST00000538418 IL2RAP01589 272 aa12.86□□□□□ -0.35
CD9-207ENST00000538418 NEFLP07196 543 aa12.86□□□□□ -0.35
CD9-207ENST00000538418 PCSK2P16519 638 aa12.86□□□□□ -0.35
CD9-207ENST00000538418 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
CD9-207ENST00000538418 ADD1P35611 737 aaKnown RBP12.86□□□□□ -0.35
CD9-207ENST00000538418 TEAD4Q15561 434 aa12.86□□□□□ -0.35
CD9-207ENST00000538418 SOGA3Q5TF21 947 aa12.86□□□□□ -0.35
CD9-207ENST00000538418 NBPF15Q8N660 670 aa12.86□□□□□ -0.35
CD9-207ENST00000538418 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
CD9-207ENST00000538418 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
CD9-207ENST00000538418 NESP48681 1621 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
CD9-207ENST00000538418 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
CD9-207ENST00000538418 PPP1R26Q5T8A7 1209 aaPredicted RBP12.85□□□□□ -0.35
CD9-207ENST00000538418 SH3PXD2AQ5TCZ1 1133 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 PPP1R18Q6NYC8 613 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 HS2ST1Q7LGA3 356 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 CCDC116Q8IYX3 515 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 EHBP1Q8NDI1 1231 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 IFT43Q96FT9 208 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 PIF1Q9H611 641 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
CD9-207ENST00000538418 NOS2P35228 1153 aa12.84□□□□□ -0.35
CD9-207ENST00000538418 SRA1Q9HD15 236 aaKnown RBP12.84□□□□□ -0.35
CD9-207ENST00000538418 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
CD9-207ENST00000538418 ZNF232Q9UNY5 417 aa12.84□□□□□ -0.35
CD9-207ENST00000538418 ZDHHC1Q8WTX9 485 aa12.83□□□□□ -0.36
CD9-207ENST00000538418 CNKSR1Q969H4 720 aa12.83□□□□□ -0.36
CD9-207ENST00000538418 ESYT1Q9BSJ8 1104 aa12.83□□□□□ -0.36
CD9-207ENST00000538418 ZSWIM4Q9H7M6 989 aa12.83□□□□□ -0.36
CD9-207ENST00000538418 SDE2Q6IQ49 451 aa12.82□□□□□ -0.36
CD9-207ENST00000538418 GPR152Q8TDT2 470 aa12.82□□□□□ -0.36
CD9-207ENST00000538418 NUDT16Q96DE0 195 aaKnown RBP12.82□□□□□ -0.36
CD9-207ENST00000538418 HRH3Q9Y5N1 445 aa12.82□□□□□ -0.36
CD9-207ENST00000538418 OPLAHO14841 1288 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 C8orf34Q49A92 452 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 MPNDQ8N594 471 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 TTC16Q8NEE8 873 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 GGNBP2Q9H3C7 697 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 GGT7Q9UJ14 662 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 TBX22Q9Y458 520 aa12.81□□□□□ -0.36
CD9-207ENST00000538418 CPNE3O75131 537 aaKnown RBP12.8□□□□□ -0.36
CD9-207ENST00000538418 MCF2L2Q86YR7 1114 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 TREML1Q86YW5 311 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 CHMP4AQ9BY43 222 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 PHACTR1Q9C0D0 580 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 MROH2BQ7Z745 1585 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 USP31Q70CQ4 1352 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 SBNO2Q9Y2G9 1366 aa12.8□□□□□ -0.36
CD9-207ENST00000538418 STK10O94804 968 aaKnown RBP12.79□□□□□ -0.36
CD9-207ENST00000538418 RPLP1P05386 114 aaKnown RBP12.79□□□□□ -0.36
CD9-207ENST00000538418 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
CD9-207ENST00000538418 OSBPL2Q9H1P3 480 aa12.79□□□□□ -0.36
CD9-207ENST00000538418 C12orf49Q9H741 205 aa12.79□□□□□ -0.36
CD9-207ENST00000538418 TLL2Q9Y6L7 1015 aa12.79□□□□□ -0.36
CD9-207ENST00000538418 ADH1CP00326 375 aa12.78□□□□□ -0.36
CD9-207ENST00000538418 FGRP09769 529 aa12.78□□□□□ -0.36
CD9-207ENST00000538418 NR5A1Q13285 461 aa12.78□□□□□ -0.36
CD9-207ENST00000538418 EGFLAMQ63HQ2 1017 aa12.78□□□□□ -0.36
CD9-207ENST00000538418 PGPEP1Q9NXJ5 209 aa12.78□□□□□ -0.36
CD9-207ENST00000538418 A6NHS1 94 aa12.77□□□□□ -0.37
CD9-207ENST00000538418 GIPC1O14908 333 aa12.77□□□□□ -0.37
CD9-207ENST00000538418 PLA2G2CQ5R387 149 aa12.77□□□□□ -0.37
CD9-207ENST00000538418 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
CD9-207ENST00000538418 ZNF295-AS1Q8N0V1 137 aa12.77□□□□□ -0.37
CD9-207ENST00000538418 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms