RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 NECTIN2Q92692 538 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 CFAP44Q96MT7 982 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 SYT17Q9BSW7 474 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 MBIPQ9NS73 344 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 BABAM1Q9NWV8 329 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 NARFQ9UHQ1 456 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 A0A087WZG4 1122 aa9.81□□□□□ -0.84
SDCBP-206ENST00000519115 EIF2S2P20042 333 aaKnown RBP9.81□□□□□ -0.84
SDCBP-206ENST00000519115 GNAI1P63096 354 aa9.81□□□□□ -0.84
SDCBP-206ENST00000519115 DDR1Q08345 913 aa9.81□□□□□ -0.84
SDCBP-206ENST00000519115 POLA2Q14181 598 aa9.81□□□□□ -0.84
SDCBP-206ENST00000519115 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
SDCBP-206ENST00000519115 NLGN2Q8NFZ4 835 aa9.81□□□□□ -0.84
SDCBP-206ENST00000519115 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
SDCBP-206ENST00000519115 IFT57Q9NWB7 429 aa9.81□□□□□ -0.84
SDCBP-206ENST00000519115 CAMTA2O94983 1202 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 ANXA1P04083 346 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 ZNF853P0CG23 659 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 MYL6BP14649 208 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 SLFN5Q08AF3 891 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 NFIXQ14938 502 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 PROSER3Q2NL68 480 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 BICDL1Q6ZP65 573 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 TSR2Q969E8 191 aaKnown RBP9.8□□□□□ -0.84
SDCBP-206ENST00000519115 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 BRCA1P38398 1863 aaKnown RBP9.8□□□□□ -0.84
SDCBP-206ENST00000519115 ANKRD31Q8N7Z5 1873 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 ANKRD36CQ5JPF3 1778 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 C10orf71Q711Q0 1435 aa9.8□□□□□ -0.84
SDCBP-206ENST00000519115 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
SDCBP-206ENST00000519115 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
SDCBP-206ENST00000519115 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
SDCBP-206ENST00000519115 RNF123Q5XPI4 1314 aa9.79□□□□□ -0.84
SDCBP-206ENST00000519115 POLRMTO00411 1230 aaKnown RBP9.78□□□□□ -0.84
SDCBP-206ENST00000519115 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-206ENST00000519115 TM4SF1P30408 202 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 TBC1D9BQ66K14 1250 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 TTLL7Q6ZT98 887 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 PELP1Q8IZL8 1130 aaKnown RBP9.78□□□□□ -0.84
SDCBP-206ENST00000519115 MYH16Q9H6N6 1097 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 CD2APQ9Y5K6 639 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 CACNA1SQ13698 1873 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 CHD4Q14839 1912 aa9.78□□□□□ -0.84
SDCBP-206ENST00000519115 COL11A2P13942 1736 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-206ENST00000519115 PDIA6Q15084 440 aa9.77□□□□□ -0.85
SDCBP-206ENST00000519115 C8orf58Q8NAV2 365 aa9.77□□□□□ -0.85
SDCBP-206ENST00000519115 CHPF2Q9P2E5 772 aa9.77□□□□□ -0.85
SDCBP-206ENST00000519115 DLEC1Q9Y238 1755 aa9.77□□□□□ -0.85
SDCBP-206ENST00000519115 ARFGEF2Q9Y6D5 1785 aa9.77□□□□□ -0.85
SDCBP-206ENST00000519115 PXDNLA1KZ92 1463 aa9.77□□□□□ -0.85
SDCBP-206ENST00000519115 FANCIQ9NVI1 1328 aa9.77□□□□□ -0.85
SDCBP-206ENST00000519115 CARMIL3Q8ND23 1372 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 CACNA1FO60840 1977 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 HOXB7P09629 217 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 HLFQ16534 295 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 KIF6Q6ZMV9 814 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 TSPYL6Q8N831 410 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 ZBTB3Q9H5J0 574 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 MAP3K15Q6ZN16 1313 aa9.76□□□□□ -0.85
SDCBP-206ENST00000519115 SERPINB2P05120 415 aa9.75□□□□□ -0.85
SDCBP-206ENST00000519115 AIMP1Q12904 312 aaKnown RBP9.75□□□□□ -0.85
SDCBP-206ENST00000519115 CCDC24Q8N4L8 307 aa9.75□□□□□ -0.85
SDCBP-206ENST00000519115 XAGE3Q8WTP9 111 aa9.75□□□□□ -0.85
SDCBP-206ENST00000519115 CHMP4AQ9BY43 222 aa9.75□□□□□ -0.85
SDCBP-206ENST00000519115 DDX21Q9NR30 783 aaKnown RBP eCLIP9.75□□□□□ -0.85
SDCBP-206ENST00000519115 ARFGEF1Q9Y6D6 1849 aa9.75□□□□□ -0.85
SDCBP-206ENST00000519115 TNRC6CQ9HCJ0 1690 aaKnown RBP9.74□□□□□ -0.85
SDCBP-206ENST00000519115 A0A0G2JLW4 131 aa9.74□□□□□ -0.85
SDCBP-206ENST00000519115 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
SDCBP-206ENST00000519115 TCERG1O14776 1098 aaKnown RBP9.74□□□□□ -0.85
SDCBP-206ENST00000519115 NPHP1O15259 732 aa9.74□□□□□ -0.85
SDCBP-206ENST00000519115 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.85
SDCBP-206ENST00000519115 GPTP24298 496 aa9.74□□□□□ -0.85
SDCBP-206ENST00000519115 GPR162Q16538 588 aa9.74□□□□□ -0.85
SDCBP-206ENST00000519115 COPS6Q7L5N1 327 aa9.74□□□□□ -0.85
SDCBP-206ENST00000519115 SETDB2Q96T68 719 aa9.74□□□□□ -0.85
SDCBP-206ENST00000519115 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
SDCBP-206ENST00000519115 ATP10DQ9P241 1426 aa9.73□□□□□ -0.85
SDCBP-206ENST00000519115 ERVV-1B6SEH8 477 aa9.73□□□□□ -0.85
SDCBP-206ENST00000519115 DPEP1P16444 411 aa9.73□□□□□ -0.85
SDCBP-206ENST00000519115 CHRNA5P30532 468 aa9.73□□□□□ -0.85
SDCBP-206ENST00000519115 TWISTNBQ3B726 338 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-206ENST00000519115 PRR5LQ6MZQ0 368 aa9.73□□□□□ -0.85
SDCBP-206ENST00000519115 CLEC4GQ6UXB4 293 aa9.73□□□□□ -0.85
SDCBP-206ENST00000519115 CNBD1Q8NA66 436 aa9.73□□□□□ -0.85
SDCBP-206ENST00000519115 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
SDCBP-206ENST00000519115 DBF4Q9UBU7 674 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-206ENST00000519115 GOLGB1Q14789 3259 aaKnown RBP9.73□□□□□ -0.85
SDCBP-206ENST00000519115 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-206ENST00000519115 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
SDCBP-206ENST00000519115 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
SDCBP-206ENST00000519115 NBPF5PQ86XG9 351 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-206ENST00000519115 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
SDCBP-206ENST00000519115 UBN2Q6ZU65 1347 aa9.72□□□□□ -0.85
SDCBP-206ENST00000519115 LAMB2P55268 1798 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms