RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MSX1P28360 303 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 FAM69CQ0P6D2 419 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 NBPF1Q3BBV0 1214 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 STAG2Q8N3U4 1231 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 GMCL1Q96IK5 515 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 GPAMQ9HCL2 828 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 ZDHHC3Q9NYG2 299 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 PARP3Q9Y6F1 533 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 EML1O00423 815 aa5.58□□□□□ -1.52
RIF1-212ENST00000498041 TATP17735 454 aaPredicted RBP5.58□□□□□ -1.52
RIF1-212ENST00000498041 WEE1P30291 646 aa5.58□□□□□ -1.52
RIF1-212ENST00000498041 HIRAP54198 1017 aaPredicted RBP5.58□□□□□ -1.52
RIF1-212ENST00000498041 POTEAQ6S8J7 498 aa5.58□□□□□ -1.52
RIF1-212ENST00000498041 PGBD3Q8N328 593 aa5.58□□□□□ -1.52
RIF1-212ENST00000498041 CHMP7Q8WUX9 453 aaPredicted RBP5.58□□□□□ -1.52
RIF1-212ENST00000498041 NUCKS1Q9H1E3 243 aaKnown RBP5.58□□□□□ -1.52
RIF1-212ENST00000498041 NSFL1CQ9UNZ2 370 aaKnown RBP5.58□□□□□ -1.52
RIF1-212ENST00000498041 K7ELQ4 463 aaPredicted RBP5.57□□□□□ -1.52
RIF1-212ENST00000498041 FOXO3O43524 673 aa5.57□□□□□ -1.52
RIF1-212ENST00000498041 PROCP04070 461 aa5.57□□□□□ -1.52
RIF1-212ENST00000498041 FURINP09958 794 aa5.57□□□□□ -1.52
RIF1-212ENST00000498041 SNRPNP63162 240 aaKnown RBP5.57□□□□□ -1.52
RIF1-212ENST00000498041 CLP1Q92989 425 aaKnown RBP5.57□□□□□ -1.52
RIF1-212ENST00000498041 C2orf49Q9BVC5 232 aaPredicted RBP5.57□□□□□ -1.52
RIF1-212ENST00000498041 PRMT3O60678 531 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 ATP4AP20648 1035 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 AMPD1P23109 780 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 TXLNAP40222 546 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 LBRQ14739 615 aaKnown RBP5.56□□□□□ -1.52
RIF1-212ENST00000498041 GRIN2CQ14957 1233 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 ARSJQ5FYB0 599 aaPredicted RBP5.56□□□□□ -1.52
RIF1-212ENST00000498041 EFHC2Q5JST6 749 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 SH3PXD2AQ5TCZ1 1133 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 C1orf53Q5VUE5 145 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 PRIMPOLQ96LW4 560 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 OXCT2Q9BYC2 517 aaPredicted RBP5.56□□□□□ -1.52
RIF1-212ENST00000498041 CRISPLD1Q9H336 500 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 RUBCNLQ9H714 662 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 HCN4Q9Y3Q4 1203 aa5.56□□□□□ -1.52
RIF1-212ENST00000498041 KRBA1A5PL33 1030 aa5.55□□□□□ -1.52
RIF1-212ENST00000498041 TMEM88BA6NKF7 163 aa5.55□□□□□ -1.52
RIF1-212ENST00000498041 BAG6P46379 1132 aa5.55□□□□□ -1.52
RIF1-212ENST00000498041 OCLNQ16625 522 aa5.55□□□□□ -1.52
RIF1-212ENST00000498041 BICDL1Q6ZP65 573 aa5.55□□□□□ -1.52
RIF1-212ENST00000498041 VTI1AQ96AJ9 217 aa5.55□□□□□ -1.52
RIF1-212ENST00000498041 ZIC5Q96T25 663 aa5.55□□□□□ -1.52
RIF1-212ENST00000498041 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.55□□□□□ -1.52
RIF1-212ENST00000498041 GPC6Q9Y625 555 aaPredicted RBP5.55□□□□□ -1.52
RIF1-212ENST00000498041 A0A1W2PNR3 127 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 SHISA8B8ZZ34 492 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 OIP5O43482 229 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 PDE4CQ08493 712 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 NLRP8Q86W28 1048 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 ALDH16A1Q8IZ83 802 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 RHPN1Q8TCX5 695 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 PHACTR1Q9C0D0 580 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 CXXC1Q9P0U4 656 aaPredicted RBP5.54□□□□□ -1.52
RIF1-212ENST00000498041 USTQ9Y2C2 406 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 GJA3Q9Y6H8 435 aa5.54□□□□□ -1.52
RIF1-212ENST00000498041 THBS1P07996 1170 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 ATP2B4P23634 1241 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 FKBP5Q13451 457 aaPredicted RBP5.53□□□□□ -1.52
RIF1-212ENST00000498041 FIGNL1Q6PIW4 674 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 C7orf43Q8WVR3 580 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 NGLY1Q96IV0 654 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 NEUROD4Q9HD90 331 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 SLAIN2Q9P270 581 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 MKL2Q9ULH7 1088 aa5.53□□□□□ -1.52
RIF1-212ENST00000498041 MAP2K3P46734 347 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 RTN1Q16799 776 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 C1orf229Q6ZS94 237 aaPredicted RBP5.52□□□□□ -1.53
RIF1-212ENST00000498041 RETREG2Q8NC44 543 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 EDARADDQ8WWZ3 215 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 COL26A1Q96A83 441 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 KLRG1Q96E93 195 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 ANKIB1Q9P2G1 1089 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 PHF24Q9UPV7 400 aa5.52□□□□□ -1.53
RIF1-212ENST00000498041 PTCD1O75127 700 aaKnown RBP5.51□□□□□ -1.53
RIF1-212ENST00000498041 UBAP2LQ14157 1087 aaKnown RBP5.51□□□□□ -1.53
RIF1-212ENST00000498041 HIF1AQ16665 826 aa5.51□□□□□ -1.53
RIF1-212ENST00000498041 LRRC69Q6ZNQ3 347 aa5.51□□□□□ -1.53
RIF1-212ENST00000498041 Q8N3U1 123 aa5.51□□□□□ -1.53
RIF1-212ENST00000498041 CFHR5Q9BXR6 569 aa5.51□□□□□ -1.53
RIF1-212ENST00000498041 ZCCHC2Q9C0B9 1178 aaKnown RBP5.51□□□□□ -1.53
RIF1-212ENST00000498041 SUV39H2Q9H5I1 410 aa5.51□□□□□ -1.53
RIF1-212ENST00000498041 PCDHGC4Q9Y5F7 938 aa5.51□□□□□ -1.53
RIF1-212ENST00000498041 CARNS1A5YM72 827 aa5.5□□□□□ -1.53
RIF1-212ENST00000498041 ATXN7O15265 892 aaPredicted RBP5.5□□□□□ -1.53
RIF1-212ENST00000498041 BMP4P12644 408 aa5.5□□□□□ -1.53
RIF1-212ENST00000498041 COL8A1P27658 744 aa5.5□□□□□ -1.53
RIF1-212ENST00000498041 SSFA2P28290 1259 aa5.5□□□□□ -1.53
RIF1-212ENST00000498041 SAMD5Q5TGI4 173 aa5.5□□□□□ -1.53
RIF1-212ENST00000498041 MYO19Q96H55 970 aa5.5□□□□□ -1.53
RIF1-212ENST00000498041 QTRT2Q9H974 415 aaKnown RBP5.5□□□□□ -1.53
RIF1-212ENST00000498041 BNIP3LO60238 219 aa5.49□□□□□ -1.53
RIF1-212ENST00000498041 B4GALNT3Q6L9W6 998 aa5.49□□□□□ -1.53
RIF1-212ENST00000498041 ABHD17AQ96GS6 310 aa5.49□□□□□ -1.53
RIF1-212ENST00000498041 SUSD3Q96L08 255 aa5.49□□□□□ -1.53
RIF1-212ENST00000498041 MKNK1Q9BUB5 465 aa5.49□□□□□ -1.53
RIF1-212ENST00000498041 NDFIP2Q9NV92 336 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms