RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 FAM182BQ5T319 152 aa4.25□□□□□ -1.73
CALD1-216ENST00000473714 NLRP8Q86W28 1048 aa4.25□□□□□ -1.73
CALD1-216ENST00000473714 PCDHB11Q9Y5F2 797 aa4.25□□□□□ -1.73
CALD1-216ENST00000473714 ELOA3CA0A087WX78 387 aaPredicted RBP4.24□□□□□ -1.73
CALD1-216ENST00000473714 ELOA3DA6NLF2 546 aaPredicted RBP4.24□□□□□ -1.73
CALD1-216ENST00000473714 ZBBXA8MT70 800 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 CD33P20138 364 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 GRIK4Q16099 956 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 ELOA3BQ3SY89 546 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 TBC1D9Q6ZT07 1266 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 PROCA1Q8NCQ7 364 aaPredicted RBP4.24□□□□□ -1.73
CALD1-216ENST00000473714 ELOA3Q8NG57 546 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 XAGE2Q96GT9 111 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 FMNL2Q96PY5 1086 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 ADAMTSL3P82987 1691 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 TDRD9Q8NDG6 1382 aaKnown RBP4.24□□□□□ -1.73
CALD1-216ENST00000473714 WDR97A6NE52 1622 aa4.24□□□□□ -1.73
CALD1-216ENST00000473714 SUPT5HO00267 1087 aaKnown RBP4.23□□□□□ -1.73
CALD1-216ENST00000473714 KHNYNO15037 678 aaKnown RBP4.23□□□□□ -1.73
CALD1-216ENST00000473714 MAPTP10636 758 aaKnown RBP4.23□□□□□ -1.73
CALD1-216ENST00000473714 MCCD1P59942 119 aaPredicted RBP4.23□□□□□ -1.73
CALD1-216ENST00000473714 TNP2Q05952 138 aa4.23□□□□□ -1.73
CALD1-216ENST00000473714 ZNF468Q5VIY5 522 aaPredicted RBP4.23□□□□□ -1.73
CALD1-216ENST00000473714 RHBDD1Q8TEB9 315 aa4.23□□□□□ -1.73
CALD1-216ENST00000473714 KIF21BO75037 1637 aa4.23□□□□□ -1.73
CALD1-216ENST00000473714 GLI2P10070 1586 aa4.23□□□□□ -1.73
CALD1-216ENST00000473714 PTPRTO14522 1441 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 SHROOM2Q13796 1616 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 LTBP4Q8N2S1 1624 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 DCDC2BA2VCK2 349 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 MYCP01106 439 aaPredicted RBP4.22□□□□□ -1.73
CALD1-216ENST00000473714 ESCO1Q5FWF5 840 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 PPARGC1BQ86YN6 1023 aaKnown RBP4.22□□□□□ -1.73
CALD1-216ENST00000473714 C1orf216Q8TAB5 229 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 ZNF592Q92610 1267 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 TP53INP1Q96A56 240 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.22□□□□□ -1.73
CALD1-216ENST00000473714 FHDC1Q9C0D6 1143 aaPredicted RBP4.22□□□□□ -1.73
CALD1-216ENST00000473714 DNAAF2Q9NVR5 837 aaKnown RBP4.22□□□□□ -1.73
CALD1-216ENST00000473714 RNF112Q9ULX5 631 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 HRH3Q9Y5N1 445 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 GRIN2BQ13224 1484 aa4.22□□□□□ -1.73
CALD1-216ENST00000473714 YEATS2Q9ULM3 1422 aa4.21□□□□□ -1.73
CALD1-216ENST00000473714 ADCY10Q96PN6 1610 aa4.21□□□□□ -1.73
CALD1-216ENST00000473714 M0R082 166 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 USP17L8P0C7I0 530 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 IRAK1P51617 712 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 NRG1Q02297 640 aaPredicted RBP4.21□□□□□ -1.74
CALD1-216ENST00000473714 ADGRE1Q14246 886 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 ARSJQ5FYB0 599 aaPredicted RBP4.21□□□□□ -1.74
CALD1-216ENST00000473714 IL27Q8NEV9 243 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 ZNF417Q8TAU3 575 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 AIDAQ96BJ3 306 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 ZNF587Q96SQ5 575 aaPredicted RBP4.21□□□□□ -1.74
CALD1-216ENST00000473714 PCMTD2Q9NV79 361 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 RAD54L2Q9Y4B4 1467 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 DNMBPQ6XZF7 1577 aa4.21□□□□□ -1.74
CALD1-216ENST00000473714 POLA1P09884 1462 aaPredicted RBP4.2□□□□□ -1.74
CALD1-216ENST00000473714 TEX14Q8IWB6 1497 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 UBAP1LF5GYI3 381 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 HSPA1LP34931 641 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 PLA2G4AP47712 749 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 MBTPS1Q14703 1052 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 SKIV2LQ15477 1246 aaKnown RBP4.2□□□□□ -1.74
CALD1-216ENST00000473714 TRAPPC3LQ5T215 181 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 TXNRD3Q86VQ6 643 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 GPBP1L1Q9HC44 474 aaPredicted RBP4.2□□□□□ -1.74
CALD1-216ENST00000473714 PRDM6Q9NQX0 595 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 MARK1Q9P0L2 795 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 RGS17Q9UGC6 210 aaPredicted RBP4.2□□□□□ -1.74
CALD1-216ENST00000473714 GJA3Q9Y6H8 435 aa4.2□□□□□ -1.74
CALD1-216ENST00000473714 A0A1W2PNR3 127 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 FBXO45P0C2W1 286 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 SH3D19Q5HYK7 790 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 SYT9Q86SS6 491 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 TRIM34Q9BYJ4 488 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 RNF114Q9Y508 228 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 WIZO95785 1651 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 PBRM1Q86U86 1689 aa4.19□□□□□ -1.74
CALD1-216ENST00000473714 SELPP16109 830 aa4.18□□□□□ -1.74
CALD1-216ENST00000473714 COL9A3Q14050 684 aaPredicted RBP4.18□□□□□ -1.74
CALD1-216ENST00000473714 TLR1Q15399 786 aa4.18□□□□□ -1.74
CALD1-216ENST00000473714 MICALL1Q8N3F8 863 aa4.18□□□□□ -1.74
CALD1-216ENST00000473714 LENG1Q96BZ8 264 aaPredicted RBP4.18□□□□□ -1.74
CALD1-216ENST00000473714 NIFKQ9BYG3 293 aaKnown RBP4.18□□□□□ -1.74
CALD1-216ENST00000473714 FAM117AQ9C073 453 aa4.18□□□□□ -1.74
CALD1-216ENST00000473714 HCN2Q9UL51 889 aa4.18□□□□□ -1.74
CALD1-216ENST00000473714 ZNF330Q9Y3S2 320 aaPredicted RBP4.18□□□□□ -1.74
CALD1-216ENST00000473714 SOGA1O94964 1423 aa4.18□□□□□ -1.74
CALD1-216ENST00000473714 NUP160Q12769 1436 aa4.18□□□□□ -1.74
CALD1-216ENST00000473714 STRCQ7RTU9 1775 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 ADARB2-AS1A8MUL3 147 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 SIN3BO75182 1162 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 FAM157BP0CG42 384 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 TAL1P17542 331 aaPredicted RBP4.17□□□□□ -1.74
CALD1-216ENST00000473714 ATP4AP20648 1035 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 RAC1P63000 192 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 LAMC2Q13753 1193 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 PRG4Q92954 1404 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms