RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 ZBTB12Q9Y330 459 aaPredicted RBP9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 VAMP4O75379 141 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 XRCC6P12956 609 aaKnown RBP eCLIP9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 TRAPPC10P48553 1259 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 UTP14CQ5TAP6 766 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 THOC2Q8NI27 1593 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 FMN1Q68DA7 1419 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 WASHC5Q12768 1159 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 HIC1Q14526 733 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 FERMT3Q86UX7 667 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 RELL1Q8IUW5 271 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 PAF1Q8N7H5 531 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 PRPF38AQ8NAV1 312 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 MAP7D2Q96T17 732 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 MPHOSPH9Q99550 1183 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 C12orf49Q9H741 205 aa9.25□□□□□ -0.93
SPTBN1-204ENST00000467371 COQ9O75208 318 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 TSPAN7P41732 249 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 NFE2Q16621 373 aaPredicted RBP9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 MCF2L2Q86YR7 1114 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 CCDC18Q5T9S5 1454 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 CDC27P30260 824 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 SERINC3Q13530 473 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 ACBD5Q5T8D3 534 aaPredicted RBP9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 TTC30AQ86WT1 665 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 ITFG2Q969R8 447 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 PHF8Q9UPP1 1060 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 GJA3Q9Y6H8 435 aa9.24□□□□□ -0.93
SPTBN1-204ENST00000467371 NAT2P11245 290 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 SSTR3P32745 418 aaPredicted RBP9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 MSL1Q68DK7 614 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 IQCEQ6IPM2 695 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 INTUQ9ULD6 942 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 PPP2R3BQ9Y5P8 575 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 CATIPQ7Z7H3 387 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 TEX19Q8NA77 164 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 MRPS23Q9Y3D9 190 aaKnown RBP9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 CDK13Q14004 1512 aaKnown RBP9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 SCNN1AP37088 669 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 FAM69CQ0P6D2 419 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 NGEFQ8N5V2 710 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 RNF217Q8TC41 542 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 DNAJC25Q9H1X3 360 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 METTL5Q9NRN9 209 aaKnown RBP9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 FAM13BQ9NYF5 915 aa9.23□□□□□ -0.93
SPTBN1-204ENST00000467371 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 IFT88Q13099 833 aa9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 WDR75Q8IWA0 830 aaKnown RBP9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 GJD4Q96KN9 370 aaPredicted RBP9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 KCNA2P16389 499 aa9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 GPSM2P81274 684 aa9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 PODNQ7Z5L7 613 aa9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
SPTBN1-204ENST00000467371 LILRB3O75022 631 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 CCDC70Q6NSX1 233 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 MRFAP1L1Q96HT8 127 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 MRS2Q9HD23 443 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 PTPRHQ9HD43 1115 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 ZNF608Q9ULD9 1512 aaPredicted RBP9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 CASKIN1Q8WXD9 1431 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 TSPAN6O43657 245 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 RPN1P04843 607 aaKnown RBP9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 CHCHD4Q8N4Q1 142 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 CDHR1Q96JP9 859 aa9.21□□□□□ -0.93
SPTBN1-204ENST00000467371 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 TRIM64CA6NLI5 447 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 ESPNB1AK53 854 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 CASP2P42575 452 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 EIF4G2P78344 907 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 ECM1Q16610 540 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 NDUFAF2Q8N183 169 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 TMEM87AQ8NBN3 555 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 TMEM63CQ9P1W3 806 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 NCOA1Q15788 1441 aa9.21□□□□□ -0.94
SPTBN1-204ENST00000467371 SATB1Q01826 763 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 WASHC4Q2M389 1173 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 K7ELQ4 463 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 RRP1P56182 461 aaKnown RBP9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 ARMC3Q5W041 872 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 SPDYE16A6NNV3 312 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 CHL1O00533 1208 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 FGRP09769 529 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 EXOSC10Q01780 885 aaKnown RBP9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 ARID5AQ03989 594 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 EAPPQ56P03 285 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 MYRIPQ8NFW9 859 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 GPCPD1Q9NPB8 672 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
SPTBN1-204ENST00000467371 PABPN1LA6NDY0 278 aaKnown RBP9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 NPHP1O15259 732 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 KRT18P05783 430 aaKnown RBP9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 ZBED6P86452 979 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 ERAP2Q6P179 960 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms