RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TTLL5Q6EMB2 1281 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 CCDC70Q6NSX1 233 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 HS2ST1Q7LGA3 356 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 NBPF11Q86T75 865 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 CREBRFQ8IUR6 639 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 OGFOD1Q8N543 542 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 LRRN4Q8WUT4 740 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 CRELD1Q96HD1 420 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 TSPAN18Q96SJ8 248 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 ARPC5LQ9BPX5 153 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 IFT122Q9HBG6 1241 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 ZNF69Q9UC07 566 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 FEZ2Q9UHY8 353 aaPredicted RBP3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 KCNG1Q9UIX4 513 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 NOL7Q9UMY1 257 aaKnown RBP3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 THRAP3Q9Y2W1 955 aaKnown RBP3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 DNMT3AQ9Y6K1 912 aaPredicted RBP3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 ALG1L2C9J202 215 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 TNFRSF10BO14763 440 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 TSPAN6O43657 245 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 DHX16O60231 1041 aaKnown RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 LDHCP07864 332 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 MYL3P08590 195 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 POLD1P28340 1107 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 CDC27P30260 824 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 CTHP32929 405 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 SEC13P55735 322 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 EHHADHQ08426 723 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 NFE2Q16621 373 aaPredicted RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 OCLNQ16625 522 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 ZNF394Q53GI3 561 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 ALG1LQ6GMV1 187 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 GET4Q7L5D6 327 aaPredicted RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 HDGFL2Q7Z4V5 671 aaPredicted RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 KIAA0907Q7Z7F0 614 aaPredicted RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 SMAP1Q8IYB5 467 aaPredicted RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 CHPFQ8IZ52 775 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 IFNL3Q8IZI9 196 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 CCDC89Q8N998 374 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 FBXO41Q8TF61 875 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 TSR2Q969E8 191 aaKnown RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 ZNF594Q96JF6 807 aaPredicted RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 C12orf49Q9H741 205 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 DNAAF2Q9NVR5 837 aaKnown RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 R3HCC1Q9Y3T6 440 aaKnown RBP3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 EMILIN1Q9Y6C2 1016 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 ERBB3P21860 1342 aa3.91□□□□□ -1.78
CTDSPL-203ENST00000416688 DDX11L8A8MPP1 907 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 ZBBXA8MT70 800 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 KIF3CO14782 793 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 CBFA2T2O43439 604 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 BPNT1O95861 308 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 FDX1P10109 184 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 HCLS1P14317 486 aaPredicted RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 HOXB1P14653 301 aaPredicted RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 ATF3P18847 181 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 PMLP29590 882 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 GNA15P30679 374 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 MASP1P48740 699 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 EMP3P54852 163 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 RACK1P63244 317 aaKnown RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 NFX1Q12986 1120 aaKnown RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 MTMR2Q13614 643 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 CCDC96Q2M329 555 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 NBPF1Q3BBV0 1214 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 TMEM95Q3KNT9 176 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 MAP7D1Q3KQU3 841 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 PADI6Q6TGC4 694 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 KRT26Q7Z3Y9 468 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 MSL3Q8N5Y2 521 aaKnown RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 SH3TC2Q8TF17 1288 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 GPRASP2Q96D09 838 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 SEC16BQ96JE7 1060 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 PRIMPOLQ96LW4 560 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 NEUROD6Q96NK8 337 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 DEPDC7Q96QD5 511 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 HS3ST6Q96QI5 342 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 FEZ1Q99689 392 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 KRTAP3-3Q9BYR6 98 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 KRTAP3-2Q9BYR7 98 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 ANO8Q9HCE9 1232 aaPredicted RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 FBXO2Q9UK22 296 aaPredicted RBP3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 PCDHGB7Q9Y5F8 929 aa3.9□□□□□ -1.79
CTDSPL-203ENST00000416688 C2orf72A6NCS6 295 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM205CA6NFA0 338 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 TRIM6-TRIM34B2RNG4 842 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 ZBTB24O43167 697 aaPredicted RBP3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 ALDH1L1O75891 902 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 CT47B1P0C2W7 299 aaPredicted RBP3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 CNGA1P29973 690 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 PTPN12Q05209 780 aaKnown RBP3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 MORC3Q14149 939 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 DSC3Q14574 896 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 NR6A1Q15406 480 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 GRAMD1BQ3KR37 738 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 PUS10Q3MIT2 529 aaKnown RBP3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 BRDTQ58F21 947 aaPredicted RBP3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 GPR153Q6NV75 609 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 C16orf86Q6ZW13 317 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms