RNA–Protein interactions for RNA: ENST00000415140.6

LTBP1-206, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 5

Gene LTBP1, Length 799 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-206ENST00000415140 TM4SF1P30408 202 aa13.8□□□□□ -0.2
LTBP1-206ENST00000415140 KRT24Q2M2I5 525 aa13.8□□□□□ -0.2
LTBP1-206ENST00000415140 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
LTBP1-206ENST00000415140 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
LTBP1-206ENST00000415140 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
LTBP1-206ENST00000415140 C4AP0C0L4 1744 aa13.8□□□□□ -0.2
LTBP1-206ENST00000415140 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 ERVV-1B6SEH8 477 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 USPL1Q5W0Q7 1092 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 LRP10Q7Z4F1 713 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 DZIP3Q86Y13 1208 aaKnown RBP13.79□□□□□ -0.2
LTBP1-206ENST00000415140 TSR2Q969E8 191 aaKnown RBP13.79□□□□□ -0.2
LTBP1-206ENST00000415140 BCL2L12Q9HB09 334 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 DBF4Q9UBU7 674 aaPredicted RBP13.79□□□□□ -0.2
LTBP1-206ENST00000415140 PPP1R1BQ9UD71 204 aaPredicted RBP13.79□□□□□ -0.2
LTBP1-206ENST00000415140 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
LTBP1-206ENST00000415140 FANCIQ9NVI1 1328 aa13.79□□□□□ -0.2
LTBP1-206ENST00000415140 E9PSI1 815 aa13.78□□□□□ -0.2
LTBP1-206ENST00000415140 MSL1Q68DK7 614 aa13.78□□□□□ -0.2
LTBP1-206ENST00000415140 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
LTBP1-206ENST00000415140 TBC1D2BQ9UPU7 963 aa13.78□□□□□ -0.2
LTBP1-206ENST00000415140 MMP10P09238 476 aa13.77□□□□□ -0.21
LTBP1-206ENST00000415140 PIP4K2AP48426 406 aaPredicted RBP13.77□□□□□ -0.21
LTBP1-206ENST00000415140 MKRN4PQ13434 485 aaPredicted RBP13.77□□□□□ -0.21
LTBP1-206ENST00000415140 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
LTBP1-206ENST00000415140 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
LTBP1-206ENST00000415140 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
LTBP1-206ENST00000415140 HYPKQ9NX55 129 aa13.77□□□□□ -0.21
LTBP1-206ENST00000415140 ZNF652Q9Y2D9 606 aa13.77□□□□□ -0.21
LTBP1-206ENST00000415140 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.21
LTBP1-206ENST00000415140 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
LTBP1-206ENST00000415140 MYL6BP14649 208 aa13.76□□□□□ -0.21
LTBP1-206ENST00000415140 SLFN5Q08AF3 891 aa13.76□□□□□ -0.21
LTBP1-206ENST00000415140 NBR1Q14596 966 aa13.76□□□□□ -0.21
LTBP1-206ENST00000415140 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
LTBP1-206ENST00000415140 CD2APQ9Y5K6 639 aa13.76□□□□□ -0.21
LTBP1-206ENST00000415140 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
LTBP1-206ENST00000415140 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
LTBP1-206ENST00000415140 VAMP4O75379 141 aa13.75□□□□□ -0.21
LTBP1-206ENST00000415140 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
LTBP1-206ENST00000415140 NFIXQ14938 502 aa13.75□□□□□ -0.21
LTBP1-206ENST00000415140 PROSER3Q2NL68 480 aa13.75□□□□□ -0.21
LTBP1-206ENST00000415140 CHPF2Q9P2E5 772 aa13.75□□□□□ -0.21
LTBP1-206ENST00000415140 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
LTBP1-206ENST00000415140 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
LTBP1-206ENST00000415140 TTLL7Q6ZT98 887 aa13.74□□□□□ -0.21
LTBP1-206ENST00000415140 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
LTBP1-206ENST00000415140 SYT17Q9BSW7 474 aa13.74□□□□□ -0.21
LTBP1-206ENST00000415140 FHDC1Q9C0D6 1143 aaPredicted RBP13.74□□□□□ -0.21
LTBP1-206ENST00000415140 SRCAPQ6ZRS2 3230 aa13.74□□□□□ -0.21
LTBP1-206ENST00000415140 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
LTBP1-206ENST00000415140 DDR1Q08345 913 aa13.73□□□□□ -0.21
LTBP1-206ENST00000415140 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
LTBP1-206ENST00000415140 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
LTBP1-206ENST00000415140 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
LTBP1-206ENST00000415140 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
LTBP1-206ENST00000415140 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
LTBP1-206ENST00000415140 ANXA1P04083 346 aa13.72□□□□□ -0.21
LTBP1-206ENST00000415140 SERPINB2P05120 415 aa13.72□□□□□ -0.21
LTBP1-206ENST00000415140 TBC1D9BQ66K14 1250 aa13.72□□□□□ -0.21
LTBP1-206ENST00000415140 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
LTBP1-206ENST00000415140 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
LTBP1-206ENST00000415140 STK31Q9BXU1 1019 aa13.72□□□□□ -0.21
LTBP1-206ENST00000415140 BCORQ6W2J9 1755 aa13.72□□□□□ -0.21
LTBP1-206ENST00000415140 CACNA1FO60840 1977 aa13.71□□□□□ -0.21
LTBP1-206ENST00000415140 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
LTBP1-206ENST00000415140 TGFB2P61812 414 aa13.71□□□□□ -0.21
LTBP1-206ENST00000415140 HNRNPUQ00839 825 aaKnown RBP eCLIP13.71□□□□□ -0.21
LTBP1-206ENST00000415140 HLFQ16534 295 aa13.71□□□□□ -0.21
LTBP1-206ENST00000415140 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
LTBP1-206ENST00000415140 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
LTBP1-206ENST00000415140 PLBD2Q8NHP8 589 aa13.71□□□□□ -0.21
LTBP1-206ENST00000415140 PODXL2Q9NZ53 605 aa13.71□□□□□ -0.21
LTBP1-206ENST00000415140 ATP10DQ9P241 1426 aa13.71□□□□□ -0.22
LTBP1-206ENST00000415140 CARMIL3Q8ND23 1372 aa13.71□□□□□ -0.22
LTBP1-206ENST00000415140 ZNF34Q8IZ26 560 aa13.7□□□□□ -0.22
LTBP1-206ENST00000415140 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
LTBP1-206ENST00000415140 ZBED9Q6R2W3 1325 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 DDX58O95786 925 aaKnown RBP13.69□□□□□ -0.22
LTBP1-206ENST00000415140 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
LTBP1-206ENST00000415140 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 PARP10Q53GL7 1025 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
LTBP1-206ENST00000415140 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 NRXN2Q9P2S2 1712 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 NUP98P52948 1817 aa13.69□□□□□ -0.22
LTBP1-206ENST00000415140 TRIM28Q13263 835 aaKnown RBP13.68□□□□□ -0.22
LTBP1-206ENST00000415140 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
LTBP1-206ENST00000415140 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
LTBP1-206ENST00000415140 KIF13BQ9NQT8 1826 aa13.68□□□□□ -0.22
LTBP1-206ENST00000415140 IBTKQ9P2D0 1353 aaPredicted RBP13.68□□□□□ -0.22
LTBP1-206ENST00000415140 BRIP1Q9BX63 1249 aa13.67□□□□□ -0.22
LTBP1-206ENST00000415140 NYXQ9GZU5 481 aa13.67□□□□□ -0.22
LTBP1-206ENST00000415140 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms