RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 TMEM87AQ8NBN3 555 aa8.41□□□□□ -1.06
SSX3-202ENST00000376893 HINFPQ9BQA5 517 aa8.41□□□□□ -1.06
SSX3-202ENST00000376893 LNPKQ9C0E8 428 aa8.41□□□□□ -1.06
SSX3-202ENST00000376893 BRPF3Q9ULD4 1205 aa8.41□□□□□ -1.06
SSX3-202ENST00000376893 CEP152O94986 1710 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 DEPDC5O75140 1603 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 MYO3AQ8NEV4 1616 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 ABCC3O15438 1527 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 RRBP1Q9P2E9 1410 aaKnown RBP8.4□□□□□ -1.06
SSX3-202ENST00000376893 DHX29Q7Z478 1369 aaKnown RBP8.4□□□□□ -1.06
SSX3-202ENST00000376893 SORBS3O60504 671 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 DXOO77932 396 aaKnown RBP8.4□□□□□ -1.06
SSX3-202ENST00000376893 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 DAB2P98082 770 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 FANCCQ00597 558 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 GNL2Q13823 731 aaKnown RBP8.4□□□□□ -1.06
SSX3-202ENST00000376893 SOGA3Q5TF21 947 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 ALKBH8Q96BT7 664 aaKnown RBP8.4□□□□□ -1.06
SSX3-202ENST00000376893 PRKD2Q9BZL6 878 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 NBPF3Q9H094 633 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 CCSER2Q9H7U1 834 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 PRKAG2Q9UGJ0 569 aa8.4□□□□□ -1.06
SSX3-202ENST00000376893 ERBINQ96RT1 1412 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 TLDC2A0PJX2 215 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 NR1I2O75469 434 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 PSME1Q06323 249 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 MTMR3Q13615 1198 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 C9orf131Q5VYM1 1079 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 GAS2L2Q8NHY3 880 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 PARP2Q9UGN5 583 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 ZC3H13Q5T200 1668 aaKnown RBP8.39□□□□□ -1.07
SSX3-202ENST00000376893 PREX1Q8TCU6 1659 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 CAMSAP1Q5T5Y3 1602 aa8.39□□□□□ -1.07
SSX3-202ENST00000376893 ARHGAP33O14559 1287 aa8.38□□□□□ -1.07
SSX3-202ENST00000376893 LDHBP07195 334 aaKnown RBP8.38□□□□□ -1.07
SSX3-202ENST00000376893 MMP16P51512 607 aa8.38□□□□□ -1.07
SSX3-202ENST00000376893 RBL2Q08999 1139 aa8.38□□□□□ -1.07
SSX3-202ENST00000376893 ALKBH2Q6NS38 261 aa8.38□□□□□ -1.07
SSX3-202ENST00000376893 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
SSX3-202ENST00000376893 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
SSX3-202ENST00000376893 FAM135AQ9P2D6 1515 aa8.38□□□□□ -1.07
SSX3-202ENST00000376893 UNC13BO14795 1591 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 RNF40O75150 1001 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 CEBPAP49715 358 aaPredicted RBP8.37□□□□□ -1.07
SSX3-202ENST00000376893 PLCB3Q01970 1234 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 SH3RF1Q7Z6J0 888 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 NCOA1Q15788 1441 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 GCC2Q8IWJ2 1684 aa8.37□□□□□ -1.07
SSX3-202ENST00000376893 IGHA2P01877 340 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 TSPY4P0CV99 314 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 TSPY10P0CW01 314 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 ZNF76P36508 570 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 ATP2B2Q01814 1243 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 PDE3BQ13370 1112 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 NBPF20Q3BBV1 942 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 FAM129BQ96TA1 746 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 DUSP9Q99956 384 aaKnown RBP8.36□□□□□ -1.07
SSX3-202ENST00000376893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
SSX3-202ENST00000376893 RRP7BPQ9NSQ0 103 aa8.36□□□□□ -1.07
SSX3-202ENST00000376893 ANKRD30AQ9BXX3 1397 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 ZNF142P52746 1687 aaPredicted RBP8.35□□□□□ -1.07
SSX3-202ENST00000376893 PZPP20742 1482 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 ESPNB1AK53 854 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 KIF3BO15066 747 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 GIGYF1O75420 1035 aaPredicted RBP8.35□□□□□ -1.07
SSX3-202ENST00000376893 PSEN2P49810 448 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 EHHADHQ08426 723 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 GGT6Q6P531 493 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 CAPN12Q6ZSI9 719 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 TSEN2Q8NCE0 465 aaKnown RBP8.35□□□□□ -1.07
SSX3-202ENST00000376893 ZFRQ96KR1 1074 aaKnown RBP8.35□□□□□ -1.07
SSX3-202ENST00000376893 DNAJC2Q99543 621 aaKnown RBP8.35□□□□□ -1.07
SSX3-202ENST00000376893 VPS9D1Q9Y2B5 631 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 VWDEQ8N2E2 1590 aa8.35□□□□□ -1.07
SSX3-202ENST00000376893 EFCAB6Q5THR3 1501 aa8.34□□□□□ -1.07
SSX3-202ENST00000376893 PSMD2Q13200 908 aa8.34□□□□□ -1.07
SSX3-202ENST00000376893 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
SSX3-202ENST00000376893 LRCH3Q96II8 777 aa8.34□□□□□ -1.07
SSX3-202ENST00000376893 CAPN10Q9HC96 672 aa8.34□□□□□ -1.07
SSX3-202ENST00000376893 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
SSX3-202ENST00000376893 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
SSX3-202ENST00000376893 ANKRD50Q9ULJ7 1429 aa8.34□□□□□ -1.07
SSX3-202ENST00000376893 CEP170BQ9Y4F5 1589 aaPredicted RBP8.34□□□□□ -1.07
SSX3-202ENST00000376893 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
SSX3-202ENST00000376893 WASLO00401 505 aaPredicted RBP8.33□□□□□ -1.08
SSX3-202ENST00000376893 MPSTP25325 297 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 PBX2P40425 430 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 CCDC144BQ3MJ40 725 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 UHRF1BP1Q6BDS2 1440 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 ALG1LQ6GMV1 187 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 FRMD6Q96NE9 622 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 PURBQ96QR8 312 aaKnown RBP8.33□□□□□ -1.08
SSX3-202ENST00000376893 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 ROCK1Q13464 1354 aa8.33□□□□□ -1.08
SSX3-202ENST00000376893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSX3-202ENST00000376893 ERVK-7P63135 1459 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms