RNA–Protein interactions for RNA: ENST00000362409.1

RNU6-661P-201, Transcript of RNA, U6 small nuclear 661, pseudogene, humanhuman

BASIC

Gene RNU6-661P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-661P-201ENST00000362409 DNAAF2Q9NVR5 837 aaKnown RBP3.2□□□□□ -1.9
RNU6-661P-201ENST00000362409 PCDHB11Q9Y5F2 797 aa3.2□□□□□ -1.9
RNU6-661P-201ENST00000362409 FRMPD1Q5SYB0 1578 aa3.2□□□□□ -1.9
RNU6-661P-201ENST00000362409 WRNQ14191 1432 aaPredicted RBP eCLIP3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 BCORL1Q5H9F3 1711 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 HYAL3O43820 417 aaPredicted RBP3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 FBXO45P0C2W1 286 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 CD33P20138 364 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 EFHC2Q5JST6 749 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 ZSCAN10Q96SZ4 725 aaPredicted RBP3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 ESYT1Q9BSJ8 1104 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 TRIM34Q9BYJ4 488 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 FHDC1Q9C0D6 1143 aaPredicted RBP3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 HRH3Q9Y5N1 445 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 WDR7Q9Y4E6 1490 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 ARAP3Q8WWN8 1544 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 UACAQ9BZF9 1416 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 YEATS2Q9ULM3 1422 aa3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 TTBK1Q5TCY1 1321 aaPredicted RBP3.19□□□□□ -1.9
RNU6-661P-201ENST00000362409 CUL7Q14999 1698 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 TNIKQ9UKE5 1360 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 DCDC2BA2VCK2 349 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 RAPGEF3O95398 923 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 UBTFP17480 764 aaKnown RBP3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 PCBP4P57723 403 aaKnown RBP3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 LRP8Q14114 963 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 LBRQ14739 615 aaKnown RBP3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 TMEM214Q6NUQ4 689 aaKnown RBP3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 ZCCHC2Q9C0B9 1178 aaKnown RBP3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 RSPH6AQ9H0K4 717 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 SIGLEC1Q9BZZ2 1709 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 DISP1Q96F81 1524 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 CD109Q6YHK3 1445 aa3.18□□□□□ -1.9
RNU6-661P-201ENST00000362409 STRCQ7RTU9 1775 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 RIMS1Q86UR5 1692 aaKnown RBP3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 ZBBXA8MT70 800 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 ATP4AP20648 1035 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 ADH6P28332 368 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 HSPA1LP34931 641 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 PLA2G4AP47712 749 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 GRIK4Q16099 956 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 GNASQ5JWF2 1037 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 C8orf86Q6ZUL3 223 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 PNMA1Q8ND90 353 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 CDCA7Q9BWT1 371 aaPredicted RBP3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 CRISPLD1Q9H336 500 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 RGS17Q9UGC6 210 aaPredicted RBP3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 ZCCHC11Q5TAX3 1644 aaKnown RBP3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 ARHGEF40Q8TER5 1519 aa3.17□□□□□ -1.9
RNU6-661P-201ENST00000362409 IQSEC2Q5JU85 1478 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 KHNYNO15037 678 aaKnown RBP3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 ATXN7O15265 892 aaPredicted RBP3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 APBA3O96018 575 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 GNRH1P01148 92 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 MAPTP10636 758 aaKnown RBP3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 TNP2Q05952 138 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 COL9A3Q14050 684 aaPredicted RBP3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 NEUROD2Q15784 382 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 MCTP1Q6DN14 999 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 XAGE2Q96GT9 111 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 STRN4Q9NRL3 753 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 ATP1B4Q9UN42 357 aaPredicted RBP3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 PCDHGC4Q9Y5F7 938 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 PTPRTO14522 1441 aa3.16□□□□□ -1.9
RNU6-661P-201ENST00000362409 TRIM26Q12899 539 aaPredicted RBP3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 SKIV2LQ15477 1246 aaKnown RBP3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 PRRT3Q5FWE3 981 aa3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 RHBDD1Q8TEB9 315 aa3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 TRIM52Q96A61 297 aa3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 SLC24A3Q9HC58 644 aa3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 TTC37Q6PGP7 1564 aa3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 ALKQ9UM73 1620 aa3.15□□□□□ -1.91
RNU6-661P-201ENST00000362409 NCOA1Q15788 1441 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 UBAP1LF5GYI3 381 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 M0R082 166 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 RANGAP1P46060 587 aaPredicted RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 CEBPAP49715 358 aaPredicted RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 SH3D19Q5HYK7 790 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ZNF468Q5VIY5 522 aaPredicted RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 RNF20Q5VTR2 975 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 FIGNL1Q6PIW4 674 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 TBC1D9Q6ZT07 1266 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ZNF417Q8TAU3 575 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 CCDC85AQ96PX6 553 aaPredicted RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ZNF587Q96SQ5 575 aaPredicted RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ESF1Q9H501 851 aaKnown RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ETNK1Q9HBU6 452 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 STARD13Q9Y3M8 1113 aa3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ARID4BQ4LE39 1312 aaPredicted RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ZNF335Q9H4Z2 1342 aaPredicted RBP3.14□□□□□ -1.91
RNU6-661P-201ENST00000362409 ELOA3CA0A087WX78 387 aaPredicted RBP3.13□□□□□ -1.91
RNU6-661P-201ENST00000362409 A0A1W2PNR3 127 aa3.13□□□□□ -1.91
RNU6-661P-201ENST00000362409 ELOA3DA6NLF2 546 aaPredicted RBP3.13□□□□□ -1.91
RNU6-661P-201ENST00000362409 COBLO75128 1261 aa3.13□□□□□ -1.91
RNU6-661P-201ENST00000362409 ALBP02768 609 aa3.13□□□□□ -1.91
RNU6-661P-201ENST00000362409 GTF2E1P29083 439 aaPredicted RBP3.13□□□□□ -1.91
RNU6-661P-201ENST00000362409 RFC5P40937 340 aa3.13□□□□□ -1.91
RNU6-661P-201ENST00000362409 TLR1Q15399 786 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms