RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 PLEKHA4Q9H4M7 779 aa13.35□□□□□ -0.27
SEPSECS-201ENST00000358971 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
SEPSECS-201ENST00000358971 MKRN1Q9UHC7 482 aaKnown RBP13.35□□□□□ -0.27
SEPSECS-201ENST00000358971 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
SEPSECS-201ENST00000358971 PRG4Q92954 1404 aaPredicted RBP13.35□□□□□ -0.27
SEPSECS-201ENST00000358971 SHPRHQ149N8 1683 aa13.35□□□□□ -0.27
SEPSECS-201ENST00000358971 BECN2A8MW95 431 aa13.34□□□□□ -0.27
SEPSECS-201ENST00000358971 CALRP27797 417 aaKnown RBP13.34□□□□□ -0.27
SEPSECS-201ENST00000358971 MRFAP1L1Q96HT8 127 aa13.34□□□□□ -0.27
SEPSECS-201ENST00000358971 MED14O60244 1454 aa13.34□□□□□ -0.27
SEPSECS-201ENST00000358971 HOMEZQ8IX15 550 aa13.34□□□□□ -0.27
SEPSECS-201ENST00000358971 ESYT1Q9BSJ8 1104 aa13.34□□□□□ -0.27
SEPSECS-201ENST00000358971 GPATCH8Q9UKJ3 1502 aaKnown RBP13.33□□□□□ -0.27
SEPSECS-201ENST00000358971 EFCAB8A8MWE9 144 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 TADA3O75528 432 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 E4F1Q66K89 784 aaPredicted RBP13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 AATKQ6ZMQ8 1374 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 SCP2P22307 547 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 MCM6Q14566 821 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 TTC6Q86TZ1 520 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 FUT8Q9BYC5 575 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 MYOM1P52179 1685 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 A0A087WUV0 522 aaPredicted RBP13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
SEPSECS-201ENST00000358971 USP8P40818 1118 aa13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 KRT85P78386 507 aa13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 CPP00450 1065 aa13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 SEMA3FQ13275 785 aa13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 RILPL2Q969X0 211 aa13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
SEPSECS-201ENST00000358971 NRDCO43847 1150 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 ERLIN2O94905 339 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 ETF1P62495 437 aaKnown RBP13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 RBM28Q9NW13 759 aaKnown RBP13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 TRDNQ13061 729 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 TSHZ3Q63HK5 1081 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 GJB2P29033 226 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.284e-10■■■■■ 38.9
SEPSECS-201ENST00000358971 GSDMDP57764 484 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 MRPL50Q8N5N7 158 aaKnown RBP13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 DDX19AQ9NUU7 478 aaKnown RBP13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 MTMR6Q9Y217 621 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 IL16Q14005 1332 aa13.31□□□□□ -0.28
SEPSECS-201ENST00000358971 LIG3P49916 1009 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 LONRF2Q1L5Z9 754 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 LRRFIP1Q32MZ4 808 aaKnown RBP13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 GBP6Q6ZN66 633 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 GPR161Q8N6U8 529 aaKnown RBP13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 ARHGAP45Q92619 1136 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 MYO5CQ9NQX4 1742 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 KDM5AP29375 1690 aaKnown RBP13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 PBRM1Q86U86 1689 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 FAM177A1Q8N128 213 aaPredicted RBP13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 BICD2Q8TD16 824 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
SEPSECS-201ENST00000358971 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 RPS6KA5O75582 802 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 HNRNPH1P31943 449 aaKnown RBP13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 FAN1Q9Y2M0 1017 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 H0YHG0 523 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 PHACTR2O75167 634 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 SARNPP82979 210 aaKnown RBP13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 LRRC31Q6UY01 552 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 CLSTN2Q9H4D0 955 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 KCND1Q9NSA2 647 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 NEBLO76041 1014 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 TUBB4AP04350 444 aa13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
SEPSECS-201ENST00000358971 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 PDE1AP54750 535 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 TFIP11Q9UBB9 837 aaKnown RBP13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 SH3BP1Q9Y3L3 701 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 CAVIN2O95810 425 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 GNAI3P08754 354 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 AK2P54819 239 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 EIF5P55010 431 aaKnown RBP13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 KAT2BQ92831 832 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 SLC12A5Q9H2X9 1139 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
SEPSECS-201ENST00000358971 HSP90B2PQ58FF3 399 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms