RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TMEM87AQ8NBN3 555 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 WASF1Q92558 559 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 CEP131Q9UPN4 1083 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 SPG7Q9UQ90 795 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 TRIM21P19474 475 aaKnown RBP9.09□□□□□ -0.95
CIITA-201ENST00000324288 ZBTB16Q05516 673 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 PPP4R3AQ6IN85 833 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 ECM2O94769 699 aaPredicted RBP9.09□□□□□ -0.95
CIITA-201ENST00000324288 FYCO1Q9BQS8 1478 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 RRBP1Q9P2E9 1410 aaKnown RBP9.09□□□□□ -0.95
CIITA-201ENST00000324288 OTUD6BQ8N6M0 293 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 VAT1LQ9HCJ6 419 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 KIF4AO95239 1232 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 CLNS1AP54105 237 aaKnown RBP9.09□□□□□ -0.95
CIITA-201ENST00000324288 DZIP1Q86YF9 867 aaKnown RBP9.09□□□□□ -0.95
CIITA-201ENST00000324288 PHACTR2O75167 634 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 TDRD12Q587J7 1177 aaKnown RBP9.09□□□□□ -0.95
CIITA-201ENST00000324288 MYOM3Q5VTT5 1437 aa9.09□□□□□ -0.95
CIITA-201ENST00000324288 KARSQ15046 597 aaKnown RBP9.09□□□□□ -0.96
CIITA-201ENST00000324288 FERMT2Q96AC1 680 aa9.09□□□□□ -0.96
CIITA-201ENST00000324288 C8orf76Q96K31 380 aa9.09□□□□□ -0.96
CIITA-201ENST00000324288 URB1O60287 2271 aaKnown RBP9.08□□□□□ -0.96
CIITA-201ENST00000324288 ATF7IPQ6VMQ6 1270 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 ALS2CR12Q96Q35 445 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 MYD88Q99836 296 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 USO1O60763 962 aaKnown RBP9.08□□□□□ -0.96
CIITA-201ENST00000324288 ZC3H6P61129 1189 aaKnown RBP9.08□□□□□ -0.96
CIITA-201ENST00000324288 CETN2P41208 172 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 MYH10P35580 1976 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 PTGS1P23219 599 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 CCDC150Q8NCX0 1101 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 CFAP57Q96MR6 1250 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 CCDC94Q9BW85 323 aaPredicted RBP9.08□□□□□ -0.96
CIITA-201ENST00000324288 ZEB2O60315 1214 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 TCERG1LQ5VWI1 586 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 NAPBQ9H115 298 aa9.08□□□□□ -0.96
CIITA-201ENST00000324288 WDR97A6NE52 1622 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 U3KPZ7 1027 aaPredicted RBP9.07□□□□□ -0.96
CIITA-201ENST00000324288 ARL1P40616 181 aaPredicted RBP9.07□□□□□ -0.96
CIITA-201ENST00000324288 NOLC1Q14978 699 aaKnown RBP eCLIP9.07□□□□□ -0.96
CIITA-201ENST00000324288 FGD6Q6ZV73 1430 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 TTC12Q9H892 705 aaPredicted RBP9.07□□□□□ -0.96
CIITA-201ENST00000324288 VPS36Q86VN1 386 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 HAND2P61296 217 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 GTPBP4Q9BZE4 634 aaKnown RBP9.07□□□□□ -0.96
CIITA-201ENST00000324288 CNPY2Q9Y2B0 182 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 WDR66Q8TBY9 1149 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 NECAB1Q8N987 351 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 MIPOL1Q8TD10 442 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 NAA15Q9BXJ9 866 aaKnown RBP9.07□□□□□ -0.96
CIITA-201ENST00000324288 ANKRD50Q9ULJ7 1429 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 PRC1O43663 620 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 CCDC40Q4G0X9 1142 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 CNNM3Q8NE01 707 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 SLC12A7Q9Y666 1083 aa9.07□□□□□ -0.96
CIITA-201ENST00000324288 RHOXF2BP0C7M4 288 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 MX1P20591 662 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 KRT32Q14532 448 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 GBP6Q6ZN66 633 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 RHOXF2Q9BQY4 288 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 AK9Q5TCS8 1911 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 PDE4DIPQ5VU43 2346 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 ZPR1O75312 459 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 GSDMDP57764 484 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 GRIPAP1Q4V328 841 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 C6orf163Q5TEZ5 329 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
CIITA-201ENST00000324288 CCDC8Q9H0W5 538 aaPredicted RBP9.06□□□□□ -0.96
CIITA-201ENST00000324288 CERS3Q8IU89 383 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
CIITA-201ENST00000324288 JADE2Q9NQC1 790 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 PDE1CQ14123 709 aaPredicted RBP9.06□□□□□ -0.96
CIITA-201ENST00000324288 FEZ1Q99689 392 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 ARFGAP3Q9NP61 516 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 XRCC6P12956 609 aaKnown RBP eCLIP9.06□□□□□ -0.96
CIITA-201ENST00000324288 CAPN2P17655 700 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 CUL5Q93034 780 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 LRRC2Q9BYS8 371 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 GJC1P36383 396 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 ZNF165P49910 485 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 KRBA2Q6ZNG9 492 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 SEPT14Q6ZU15 432 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 DDX23Q9BUQ8 820 aaKnown RBP9.06□□□□□ -0.96
CIITA-201ENST00000324288 SAMM50Q9Y512 469 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 IVLP07476 585 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 SKILP12757 684 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 C17orf53Q8N3J3 647 aaPredicted RBP9.06□□□□□ -0.96
CIITA-201ENST00000324288 CCDC171Q6TFL3 1326 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 CTAGE5O15320 804 aa9.06□□□□□ -0.96
CIITA-201ENST00000324288 SSRP1Q08945 709 aaKnown RBP9.05□□□□□ -0.96
CIITA-201ENST00000324288 PRIMPOLQ96LW4 560 aa9.05□□□□□ -0.96
CIITA-201ENST00000324288 CCDC114Q96M63 670 aa9.05□□□□□ -0.96
CIITA-201ENST00000324288 GPTP24298 496 aa9.05□□□□□ -0.96
CIITA-201ENST00000324288 GRM1Q13255 1194 aa9.05□□□□□ -0.96
CIITA-201ENST00000324288 ZNF354CQ86Y25 554 aa9.05□□□□□ -0.96
CIITA-201ENST00000324288 SYCP3Q8IZU3 236 aa9.05□□□□□ -0.96
CIITA-201ENST00000324288 CCDC155Q8N6L0 562 aa9.05□□□□□ -0.96
CIITA-201ENST00000324288 GOLGA1Q92805 767 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms