RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 GIMAP6Q6P9H5 292 aa17.2■□□□□ 0.34
C12orf49-201ENST00000261318 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
C12orf49-201ENST00000261318 NUCB1Q02818 461 aa17.2■□□□□ 0.34
C12orf49-201ENST00000261318 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
C12orf49-201ENST00000261318 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
C12orf49-201ENST00000261318 IBSPP21815 317 aaPredicted RBP17.2■□□□□ 0.34
C12orf49-201ENST00000261318 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
C12orf49-201ENST00000261318 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
C12orf49-201ENST00000261318 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
C12orf49-201ENST00000261318 KANK3Q6NY19 840 aa17.19■□□□□ 0.34
C12orf49-201ENST00000261318 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
C12orf49-201ENST00000261318 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.19■□□□□ 0.34
C12orf49-201ENST00000261318 ZSCAN22P10073 491 aaPredicted RBP17.19■□□□□ 0.34
C12orf49-201ENST00000261318 GNG11P61952 73 aa17.19■□□□□ 0.34
C12orf49-201ENST00000261318 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
C12orf49-201ENST00000261318 RPRD2Q5VT52 1461 aaKnown RBP17.19■□□□□ 0.34
C12orf49-201ENST00000261318 THEMISQ8N1K5 641 aaPredicted RBP17.19■□□□□ 0.34
C12orf49-201ENST00000261318 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
C12orf49-201ENST00000261318 HMG20BQ9P0W2 317 aa17.19■□□□□ 0.34
C12orf49-201ENST00000261318 TMEM266Q2M3C6 531 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 GPATCH11Q8N954 259 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 STARD3NLO95772 234 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 HDAC1Q13547 482 aaPredicted RBP17.18■□□□□ 0.34
C12orf49-201ENST00000261318 ZSCAN29Q8IWY8 852 aaPredicted RBP17.18■□□□□ 0.34
C12orf49-201ENST00000261318 MYD88Q99836 296 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 MAP3K12Q12852 859 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 EHBP1Q8NDI1 1231 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 ARFGAP3Q9NP61 516 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
C12orf49-201ENST00000261318 JADE2Q9NQC1 790 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
C12orf49-201ENST00000261318 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 PYM1Q9BRP8 204 aaKnown RBP17.17■□□□□ 0.34
C12orf49-201ENST00000261318 RNF41Q9H4P4 317 aaPredicted RBP17.17■□□□□ 0.34
C12orf49-201ENST00000261318 GOLGA8AA7E2F4 631 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 IFIT3O14879 490 aaKnown RBP17.17■□□□□ 0.34
C12orf49-201ENST00000261318 ZNF830Q96NB3 372 aaPredicted RBP17.17■□□□□ 0.34
C12orf49-201ENST00000261318 ECHDC1Q9NTX5 307 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 A0A087WZG4 1122 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 ANO6Q4KMQ2 910 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 HYPKQ9NX55 129 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 NSD2O96028 1365 aa17.17■□□□□ 0.34
C12orf49-201ENST00000261318 KIF20AO95235 890 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
C12orf49-201ENST00000261318 FAM114A1Q8IWE2 563 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 ISM2Q6H9L7 571 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
C12orf49-201ENST00000261318 CATIPQ7Z7H3 387 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 UBASH3AP57075 661 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 ANAPC15P60006 121 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 FLIIQ13045 1269 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 CCDC102BQ68D86 513 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 SPECC1LQ69YQ0 1117 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 PANK2Q9BZ23 570 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 UBA5Q9GZZ9 404 aa17.16■□□□□ 0.34
C12orf49-201ENST00000261318 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
C12orf49-201ENST00000261318 TNIP1Q15025 636 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 KCNH5Q8NCM2 988 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 IVLP07476 585 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 NLRP5P59047 1200 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 IFIT5Q13325 482 aaKnown RBP17.15■□□□□ 0.34
C12orf49-201ENST00000261318 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 ZKSCAN5Q9Y2L8 839 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 RANBP6O60518 1105 aaKnown RBP17.15■□□□□ 0.34
C12orf49-201ENST00000261318 MAATS1Q7Z4T9 603 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 ZSWIM4Q9H7M6 989 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
C12orf49-201ENST00000261318 CCDC194A0A1B0GVG4 234 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 CTNNBL1Q8WYA6 563 aaPredicted RBP17.15■□□□□ 0.34
C12orf49-201ENST00000261318 HSF2BPO75031 334 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 AMPD3Q01432 767 aa17.15■□□□□ 0.34
C12orf49-201ENST00000261318 IPO4Q8TEX9 1081 aaKnown RBP17.15■□□□□ 0.34
C12orf49-201ENST00000261318 NEBLO76041 1014 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 SKILP12757 684 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 TRIM21P19474 475 aaKnown RBP17.14■□□□□ 0.33
C12orf49-201ENST00000261318 UBE4AQ14139 1066 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 SNX21Q969T3 373 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 IL16Q14005 1332 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 HOOK3Q86VS8 718 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 FAM200AQ8TCP9 573 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 NF2P35240 595 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 CKAP4Q07065 602 aaKnown RBP17.14■□□□□ 0.33
C12orf49-201ENST00000261318 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
C12orf49-201ENST00000261318 TMCO5BA8MYB1 307 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 MNAT1P51948 309 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
C12orf49-201ENST00000261318 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 IARSP41252 1262 aaKnown RBP17.13■□□□□ 0.33
C12orf49-201ENST00000261318 CEP112Q8N8E3 955 aa17.13■□□□□ 0.33
C12orf49-201ENST00000261318 ASXL1Q8IXJ9 1541 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms