RNA–Protein interactions for RNA: ENSMUST00000188338.6

Msh4-203, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Msh4, Length 2,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-203ENSMUST00000188338 Col16a1Q8BLX7 1580 aa11.55□□□□□ -0.56
Msh4-203ENSMUST00000188338 Pkp1P97350 728 aaKnown RBP11.55□□□□□ -0.56
Msh4-203ENSMUST00000188338 Ush1cQ9ES64 910 aa11.55□□□□□ -0.56
Msh4-203ENSMUST00000188338 Chd2E9PZM4 1827 aaKnown RBP11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Atp6v1dP57746 247 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Gsdma3Q5Y4Y6 464 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Tti2Q8BGV4 512 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Pnma3Q8JZW8 466 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Zbtb3Q91X45 518 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Utp3Q9JI13 469 aaKnown RBP11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Fam228bQ497Q6 232 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Slc39a6Q8C145 765 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Ccar2Q8VDP4 922 aaKnown RBP11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Ccdc96Q9CR92 584 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 Stx6Q9JKK1 255 aa11.54□□□□□ -0.56
Msh4-203ENSMUST00000188338 PtprvP70289 1705 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Smarce1O54941 411 aaKnown RBP11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Cd22P35329 862 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Syt1P46096 421 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Irf5P56477 497 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Anapc15P60007 132 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Ifit2Q64112 472 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Ccdc66Q6NS45 935 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Slc26a8Q8R0C3 999 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 GckrQ91X44 587 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Bicc1Q99MQ1 977 aaKnown RBP11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 PtmsQ9D0J8 101 aaKnown RBP11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Lmbr1lQ9D1E5 489 aa11.53□□□□□ -0.56
Msh4-203ENSMUST00000188338 Ttll7A4Q9F0 912 aa11.52□□□□□ -0.56
Msh4-203ENSMUST00000188338 Neurod6P48986 337 aa11.52□□□□□ -0.56
Msh4-203ENSMUST00000188338 Fez1Q8K0X8 392 aa11.52□□□□□ -0.56
Msh4-203ENSMUST00000188338 Echdc1Q9D9V3 322 aa11.52□□□□□ -0.56
Msh4-203ENSMUST00000188338 Fam84aQ9D650 292 aa11.52□□□□□ -0.57
Msh4-203ENSMUST00000188338 Cnksr1A2A9K7 700 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Becn1O88597 448 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Mdm2P23804 489 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ercc3P49135 783 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Cct4P80315 539 aaKnown RBP11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Clcn1Q64347 994 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Dhx38Q80X98 1228 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Polr3dQ91WD1 398 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Taf5lQ91WQ5 589 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 LratQ9JI60 231 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 ScaperF8VQ70 1398 aaKnown RBP11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Rbm8a2A0A0N4SUH6 174 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ugt1a5B2RT14 529 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 MecomP14404 1042 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Serpina10Q8R121 448 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Rbm8aQ9CWZ3 174 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Amotl1Q9D4H4 968 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Q9D9S1 216 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Slit2Q9R1B9 1521 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 Fam50bQ9WTJ8 334 aa11.51□□□□□ -0.57
Msh4-203ENSMUST00000188338 GnpatP98192 678 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Psmd1Q3TXS7 953 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Kdm4aQ8BW72 1064 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ccdc7Q9D541 371 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Arfgef2A2A5R2 1792 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Phlpp1Q8CHE4 1687 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Strn4P58404 760 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Adcy5P84309 1262 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 SympkQ80X82 1284 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ppfia1B2RXQ2 1266 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Cnnm3Q32NY4 713 aa11.5□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ddx19aQ61655 478 aaKnown RBP11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Prkab2Q6PAM0 271 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ccdc178Q8CDV0 866 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 PigbQ9JJQ0 542 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ak2Q9WTP6 239 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 D430041D05RikF6ZGR6 1678 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Col1a2Q01149 1372 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Cnnm1Q0GA42 951 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Mindy4Q3UQI9 744 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Irf9Q61179 399 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Snx13Q6PHS6 957 aa11.49□□□□□ -0.57
Msh4-203ENSMUST00000188338 Mst1rQ62190 1378 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 AceP09470 1312 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 NmiO35309 314 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ppp1r37Q8BKR5 712 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Wdr24Q8CFJ9 790 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Rnf123Q5XPI3 1314 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Adora1Q60612 326 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Zscan22Q8BGS5 496 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Add2Q9QYB8 725 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Lmtk3Q5XJV6 1424 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Trpm3Q5F4S9 1721 aa11.48□□□□□ -0.57
Msh4-203ENSMUST00000188338 Scn7aB1AYL1 1681 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 AppP12023 770 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Grm8P47743 908 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Noc3lQ8VI84 807 aaKnown RBP11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Dlg5E9Q9R9 1921 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Evi5lH3BKQ3 813 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Lnx1O70263 728 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Bach2P97303 839 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Wdr93Q402B2 695 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ddx11Q6AXC6 880 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Sf3a1Q8K4Z5 791 aaKnown RBP11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Pus3Q9JI38 481 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 C5P06684 1680 aa11.47□□□□□ -0.57
Msh4-203ENSMUST00000188338 Ptpn23Q6PB44 1692 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms