RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Slc5a4bQ91ZP4 660 aa13.24□□□□□ -0.29
Trim9-202ENSMUST00000110522 Wdr17E9Q271 1322 aa13.24□□□□□ -0.29
Trim9-202ENSMUST00000110522 Bloc1s4Q8VED2 215 aa13.24□□□□□ -0.29
Trim9-202ENSMUST00000110522 ImpactO55091 318 aa13.24□□□□□ -0.29
Trim9-202ENSMUST00000110522 Fam170aQ66LM6 333 aa13.24□□□□□ -0.29
Trim9-202ENSMUST00000110522 Riok1Q922Q2 567 aa13.24□□□□□ -0.29
Trim9-202ENSMUST00000110522 Abcc3B2RX12 1523 aa13.24□□□□□ -0.29
Trim9-202ENSMUST00000110522 Znf692Q3U381 531 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Prune1Q8BIW1 454 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Mrps27Q8BK72 415 aaKnown RBP13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Sel1lQ9Z2G6 790 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 A0A1L1SQF0 893 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ccdc158Q8CDI6 1109 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Fez1Q8K0X8 392 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ppp6r3Q922D4 844 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Setbp1Q9Z180 1582 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Tnnt2P50752 301 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Phkg2Q9DB30 406 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Trpm2Q91YD4 1506 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Rnf17Q99MV7 1640 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Pet2A2AHY8 747 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Zkscan16A2ALW2 728 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Eif4a1P60843 406 aaKnown RBP13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Dusp9Q7TNL7 452 aa13.23□□□□□ -0.29
Trim9-202ENSMUST00000110522 Cfap58B2RW38 873 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ces1hD3Z298 562 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 4931400O07RikQ9D4M5 137 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Pmfbp1Q9WVQ0 1022 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 FancaQ9JL70 1439 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Tm6sf1P58749 370 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Timm10P62073 90 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Rbm27Q5SFM8 1060 aaKnown RBP13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ncbp3Q8BZR9 615 aaKnown RBP13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ccdc178Q8CDV0 866 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Gadd45bP22339 160 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Chl1P70232 1209 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Limch1Q3UH68 1057 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Mlh1Q9JK91 760 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Plxnc1Q9QZC2 1574 aa13.22□□□□□ -0.29
Trim9-202ENSMUST00000110522 Pdzd9Q9D9M4 266 aa13.21□□□□□ -0.29
Trim9-202ENSMUST00000110522 Zscan20B2KFW1 1030 aa13.21□□□□□ -0.29
Trim9-202ENSMUST00000110522 Vps54Q5SPW0 977 aa13.21□□□□□ -0.29
Trim9-202ENSMUST00000110522 Fam213aQ9CYH2 218 aa13.21□□□□□ -0.3
Trim9-202ENSMUST00000110522 Plch2A2AP18 1501 aa13.21□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tom1O88746 492 aa13.21□□□□□ -0.3
Trim9-202ENSMUST00000110522 Larp6Q8BN59 492 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Nup133Q8R0G9 1155 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rbm10Q99KG3 930 aaKnown RBP13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Atp10aO54827 1508 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Znf335A2A5K6 1337 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Atp2b3Q0VF55 1220 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Cdkl5Q3UTQ8 938 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rbm19Q8R3C6 952 aaKnown RBP13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Zmym3Q9JLM4 1370 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Arhgef1Q61210 920 aaKnown RBP13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 IbspQ61711 324 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Pdzrn3Q69ZS0 1063 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Lmod1Q8BVA4 595 aa13.2□□□□□ -0.3
Trim9-202ENSMUST00000110522 Stat1P42225 749 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Clcn1Q64347 994 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rcan3Q9JKK0 239 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ets1P27577 440 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Larp1Q6ZQ58 1072 aaKnown RBP13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Cnksr1A2A9K7 700 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tpm2P58774 284 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 EspnlQ3UYR4 1005 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ifit2Q64112 472 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Bms1Q6PGF5 1284 aaKnown RBP13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Adam1aQ60813 791 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Asic4Q7TNS7 539 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rab3gap1Q80UJ7 981 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Lmbrd2Q8C561 694 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rapgef3Q8VCC8 918 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 NsmfQ99NF2 532 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Plekho1Q9JIY0 408 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ak2Q9WTP6 239 aa13.19□□□□□ -0.3
Trim9-202ENSMUST00000110522 Nop14Q8R3N1 860 aaKnown RBP13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ipo4Q8VI75 1082 aa13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rai14Q9EP71 979 aaKnown RBP13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ipo7Q9EPL8 1038 aaKnown RBP13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Plekhg1F6S200 1446 aa13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Disp3A3KFU9 1347 aa13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Fam184aE9PW83 1143 aa13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 March6Q6ZQ89 909 aa13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Dhx38Q80X98 1228 aa13.18□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tlr7P58681 1050 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Slc7a3P70423 618 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ppp1r21Q3TDD9 780 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Fnbp4Q6ZQ03 1031 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tti2Q8BGV4 512 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tmem266Q8BZB3 538 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Cyp27a1Q9DBG1 533 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Stk36Q69ZM6 1316 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Speer4dL7N216 212 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Eif5P59325 429 aaKnown RBP13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tpm4Q6IRU2 248 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Hmg20bQ9Z104 317 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Zc3h12cQ5DTV4 884 aa13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Foxp4Q9DBY0 795 aaKnown RBP13.17□□□□□ -0.3
Trim9-202ENSMUST00000110522 Zfyve16Q80U44 1528 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms