RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Traf5P70191 558 aa11.35□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Defa-rs10Q64263 91 aa11.35□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Eif3bQ8JZQ9 803 aaKnown RBP11.35□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Slc51aQ8R000 340 aa11.35□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Bcs1lQ9CZP5 418 aa11.35□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Spef2Q8C9J3 1734 aa11.35□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Arrdc4A0A0B4J1F4 415 aa11.34□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Prdm11A2AGX3 565 aa11.34□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Hoxb3P09026 433 aa11.34□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Syde2E9PUP1 1314 aa11.34□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Peak1Q69Z38 1735 aa11.33□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Usp17ldG5E8G2 545 aa11.33□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Usp17lcG5E8I7 545 aa11.33□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Soga3Q6NZL0 945 aa11.33□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Nsfl1cQ9CZ44 370 aaKnown RBP11.33□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Zfyve9A2A8R0 1397 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 PnnO35691 725 aaKnown RBP11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 ProcP33587 460 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Wdr70Q3TWF6 657 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Smg7Q5RJH6 1138 aaKnown RBP11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Cog5Q8C0L8 829 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 H2-Q4Q8HWB2 354 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Snap47Q8R570 413 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Prg3Q9JL95 222 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Ambra1A2AH22 1300 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Flt1P35969 1333 aa11.32□□□□□ -0.6
Scn8a-202ENSMUST00000096198 NinQ61043 2035 aa11.31□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Tom1l2Q5SRX1 507 aa11.31□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Zbtb9Q8CDC7 459 aa11.31□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Nek9Q8K1R7 984 aa11.31□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Glt1d1A4FUP9 346 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Eif6O55135 245 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Arid3aQ62431 601 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Adam39Q7M762 756 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Zbtb1Q91VL9 713 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Gimap3Q99MI6 301 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Srcin1Q9QWI6 1250 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Fzd9Q9R216 592 aa11.3□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Acsl1P41216 699 aa11.29□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Map3k9Q3U1V8 1077 aa11.29□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Tmem130Q6NXM3 419 aa11.29□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Cachd1Q6PDJ1 1288 aa11.29□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Rnf181Q9CY62 165 aa11.29□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Phkg2Q9DB30 406 aa11.29□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Dpp7Q9ET22 506 aa11.29□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Hcn4O70507 1186 aa11.28□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Map9Q3TRR0 646 aa11.28□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Klf15Q9EPW2 415 aa11.28□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Polr2aP08775 1970 aaKnown RBP11.28□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Piezo2Q8CD54 2822 aa11.27□□□□□ -0.6
Scn8a-202ENSMUST00000096198 Nkx2-3P97334 362 aa11.27□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Neurod1Q60867 357 aa11.27□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Rtp1Q8C8C1 263 aa11.27□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Pdzd9Q9D9M4 266 aa11.27□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Btaf1E9QAE3 1848 aa11.27□□□□□ -0.61
Scn8a-202ENSMUST00000096198 ArxO35085 564 aa11.26□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Chrna5Q2MKA5 467 aa11.26□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Plekhg5Q66T02 1073 aa11.26□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Kcnn2P58390 839 aa11.25□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Eya1P97767 591 aa11.25□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Rbm27Q5SFM8 1060 aaKnown RBP11.25□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Fam155aQ8CCS2 467 aa11.25□□□□□ -0.61
Scn8a-202ENSMUST00000096198 C1qtnf12Q8R2Z0 308 aa11.25□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Gm7173A0A0G2JEB6 3132 aa11.25□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.24□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Insm1Q63ZV0 521 aa11.24□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Ptrh1Q8BW00 204 aa11.24□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Ccdc88aQ5SNZ0 1873 aa11.23□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Gm43951A0A0N4SUT6 962 aa11.23□□□□□ -0.61
Scn8a-202ENSMUST00000096198 GmpsQ3THK7 693 aa11.23□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Ccdc155Q80VJ8 648 aa11.23□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Shtn1Q8K2Q9 631 aa11.23□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Ttc5Q99LG4 440 aa11.23□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Q3UJP5 209 aa11.22□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Pxylp1Q8BHA9 480 aa11.22□□□□□ -0.61
Scn8a-202ENSMUST00000096198 DiexfQ8BTT6 772 aaKnown RBP11.22□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Tnip1Q9WUU8 647 aa11.22□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Nav1Q8CH77 1875 aa11.21□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Col4a1P02463 1669 aa11.21□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Wbp1lQ8BGW2 348 aa11.21□□□□□ -0.61
Scn8a-202ENSMUST00000096198 St5Q924W7 1134 aa11.21□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Ly6iQ9WU67 134 aa11.21□□□□□ -0.61
Scn8a-202ENSMUST00000096198 Sbno2Q7TNB8 1349 aa11.2□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Fads2p1Q0VAX3 487 aa11.2□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Ssfa2Q922B9 1252 aa11.2□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Fzd1O70421 642 aa11.19□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Cyp4f37Q3V1F1 546 aa11.19□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Scaf1Q5U4C3 1256 aaKnown RBP11.19□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Ptcd2Q8R3K3 381 aaKnown RBP11.19□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Gm13128L7MU96 475 aa11.18□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Ccdc93Q7TQK5 629 aa11.18□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Smoc2Q8CD91 447 aa11.18□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Telo2Q9DC40 840 aaKnown RBP11.18□□□□□ -0.62
Scn8a-202ENSMUST00000096198 SisF8VQM5 1818 aa11.18□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Brca1P48754 1812 aa11.18□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Snai1Q02085 264 aa11.17□□□□□ -0.62
Scn8a-202ENSMUST00000096198 1700123L14RikQ3V2K7 440 aa11.17□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Atp2b4Q6Q477 1205 aa11.17□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Amer2Q8CCJ4 672 aa11.17□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Plin1Q8CGN5 517 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms