RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Chd2E9PZM4 1827 aaKnown RBP12.47□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Znf521Q6KAS7 1311 aa12.47□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Zkscan1Q8BGS3 561 aaKnown RBP12.47□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Dhx16G3X8X0 1044 aaKnown RBP12.47□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Cyp7a1Q64505 503 aa12.46□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Arap3Q8R5G7 1538 aa12.46□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Bend3Q6PAL0 825 aa12.46□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Adamtsl3G3UXC7 1706 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Pdia3P27773 505 aaKnown RBP12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Zbtb3Q91X45 518 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Chrna2Q91X60 512 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Col14a1Q80X19 1797 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Aox2Q5SGK3 1345 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Tmem266Q8BZB3 538 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Ift172Q6VH22 1749 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 InhbeO08717 350 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Pa2g4P50580 394 aaKnown RBP12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Stk11ipQ3TAA7 1072 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Gimap8Q75N62 688 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Nap1l3Q794H2 544 aa12.45□□□□□ -0.42
Ldb3-205ENSMUST00000090040 EappQ5BU09 281 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Zc3h12cQ5DTV4 884 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Pcmtd1P59913 357 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Plekho1Q9JIY0 408 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Col16a1Q8BLX7 1580 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Med1Q925J9 1575 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Washc4Q3UMB9 1173 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Ankrd23Q812A3 306 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Psrc1Q9D0P7 329 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Hdac6Q9Z2V5 1149 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 DccP70211 1447 aa12.44□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Larp1Q6ZQ58 1072 aaKnown RBP12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Smim5Q8BT42 78 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Topaz1E5FYH1 1653 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Ybx3Q9JKB3 361 aaKnown RBP12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Tnnt2P50752 301 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Nucb1Q02819 459 aaKnown RBP12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Odf2lQ9D478 642 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Atg4a-psA0A0G2JFS9 396 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Ppfia1B2RXQ2 1266 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Atg4aQ8C9S8 396 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Chmp4cQ9D7F7 232 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Il1rapl2Q9ERS6 686 aa12.43□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Znf692Q3U381 531 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Lrrc43Q3V0L5 667 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Col15a1O35206 1367 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 C3P01027 1663 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Tpm3-rs7D3Z2H9 248 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Zbtb40Q6PCS8 1258 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Evc2Q8K1G2 1220 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Krt25Q8VCW2 446 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Gm10093D3YYI8 482 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Syde2E9PUP1 1314 aa12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Hdac1O09106 482 aaKnown RBP12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Srek1Q8BZX4 494 aaKnown RBP12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Kif20bQ80WE4 1774 aaKnown RBP12.42□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Wdhd1P59328 1117 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Agtpbp1Q641K1 1218 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Rbm26Q6NZN0 1012 aaKnown RBP12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Ankrd13dQ6PD24 605 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 AidaQ8C4Q6 305 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 UvssaQ9D479 717 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Prl3d3A0A0M6L0J6 224 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Anapc15P60007 132 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Slx1bQ8BX32 270 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Prl3d2F6R3P9 224 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Speer4dL7N216 212 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 NmiO35309 314 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Mylk2Q8VCR8 613 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 ImmtQ8CAQ8 757 aaKnown RBP12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Ttc14Q9CSP9 761 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 PigbQ9JJQ0 542 aa12.41□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Esco1Q69Z69 843 aa12.4□□□□□ -0.42
Ldb3-205ENSMUST00000090040 RestQ8VIG1 1082 aa12.4□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Dcaf5Q80T85 946 aa12.4□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Ccer1Q9CQL2 403 aa12.4□□□□□ -0.42
Ldb3-205ENSMUST00000090040 MsnP26041 577 aaKnown RBP12.4□□□□□ -0.42
Ldb3-205ENSMUST00000090040 Rbbp8nlA2ABX0 614 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Trim52Q8CDV4 233 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Slc7a3P70423 618 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 PogkQ80TC5 607 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Irgm2A0A140LIF8 407 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 RdxP26043 583 aaKnown RBP12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Cyp2d12Q8BVD2 504 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Ppp4r3bQ922R5 820 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Cops6O88545 324 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Gjb2Q00977 226 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Fam160b2Q80YR2 744 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Mrps27Q8BK72 415 aaKnown RBP12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Golim4Q8BXA1 655 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Sytl4Q9R0Q1 673 aa12.39□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Me1P06801 572 aa12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 VeztQ3ZK22 780 aa12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Ehmt1Q5DW34 1296 aa12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Rdm1Q9CQK3 281 aa12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Igflr1Q3U4N7 345 aa12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 LlphQ9D945 130 aaKnown RBP12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Atp2b3Q0VF55 1220 aa12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Miga2Q8BK03 593 aa12.38□□□□□ -0.43
Ldb3-205ENSMUST00000090040 Parp14Q2EMV9 1817 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms