RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Cep120Q7TSG1 988 aa11.4□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Zfp446Q8C9M8 523 aa11.4□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Fam76aQ922G2 307 aa11.4□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 CactinQ9CS00 772 aaKnown RBP11.4□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ap3b2Q9JME5 1082 aa11.4□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ercc6F8VPZ5 1481 aa11.4□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Scp2P32020 547 aaKnown RBP11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Samsn1P57725 372 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Lig3P97386 1015 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Serpinb6Q60854 378 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 R3hcc1Q8BSI6 488 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Srcin1Q9QWI6 1250 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Fmnl2A2APV2 1086 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ifit1bl1D3Z6F0 470 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 AppP12023 770 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 HalP35492 657 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Vil1Q62468 827 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Chchd3Q9CRB9 227 aaKnown RBP11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Fut8Q9WTS2 575 aa11.39□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Pla2r1Q62028 1487 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Caskin1Q6P9K8 1431 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Jakmip2D3YXK0 820 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Map4P27546 1125 aaKnown RBP11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Uri1Q3TLD5 531 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ddx49Q4FZF3 480 aaKnown RBP11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Erlin2Q8BFZ9 340 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Arid5bQ8BM75 1188 aaKnown RBP11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Aldh1l1Q8R0Y6 902 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Prc1Q99K43 603 aaKnown RBP11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Amotl1Q9D4H4 968 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Sytl4Q9R0Q1 673 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 AknaQ80VW7 1404 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ankrd50F7BE84 1390 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ankrd44B2RXR6 993 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Tsen34Q8BMZ5 316 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ccdc60Q8C4J0 545 aa11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Mrpl12Q9DB15 201 aaKnown RBP11.38□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ncoa3O09000 1398 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Neurl4Q5NCX5 1563 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Hnrnph1O35737 449 aaKnown RBP11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 EvcP57680 1005 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Nek5Q7TSC3 627 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Baiap3Q80TT2 1134 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Fam163bQ8BUM6 167 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Frat2Q8K025 231 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 HnrnpuQ8VEK3 800 aaKnown RBP11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Paip2Q9D6V8 124 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 AvenQ9D9K3 342 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Stx6Q9JKK1 255 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Atp1a4Q9WV27 1032 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Mlh3A0A1Y7VMP7 1443 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ppfia4B8QI36 1187 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 MccE9PWI3 1003 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Elmsan1E9Q2I4 1089 aaKnown RBP11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ca8P28651 291 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Hnrnph2P70333 449 aaKnown RBP11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ddx42Q810A7 929 aaKnown RBP11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Eif2b5Q8CHW4 717 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Stk3Q9JI10 497 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Nfu1Q9QZ23 255 aa11.37□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Impdh2P24547 514 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Nol12Q8BG17 217 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Mageb16Q9CWV4 363 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Rgs12Q8CGE9 1381 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Cdk12Q14AX6 1484 aaKnown RBP11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Znf568E9PYI1 671 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Nrg3O35181 713 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 G3bp1P97855 465 aaKnown RBP11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 DpydQ8CHR6 1025 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Fbxo18Q8K2I9 1042 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Vps18Q8R307 973 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Mkrn1Q9QXP6 481 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Dnmt1P13864 1620 aaKnown RBP11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Phactr2B1AVP0 632 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Cd22P35329 862 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Utp18Q5SSI6 552 aaKnown RBP11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ssh2Q5SW75 1423 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ccdc57Q6PHN1 1016 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Fmnl3Q6ZPF4 1028 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Srgap3Q812A2 1099 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Slu7Q8BHJ9 585 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Tmem87aQ8BXN9 555 aa11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Trap1Q9CQN1 706 aaKnown RBP11.36□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Tex11Q14AT2 947 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Rassf10Q8BL43 508 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Maats1Q8BRC6 783 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 RpainQ9CWY9 219 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Clstn2Q9ER65 966 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Hecw1Q8K4P8 1604 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Atp7aQ64430 1491 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Cnbd1B1AWM0 430 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Q3UPC7 1272 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Brsk2Q69Z98 735 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Nutm1Q8BHP2 1126 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Smc1bQ920F6 1248 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 TnmdQ9EP64 317 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Pik3r4Q8VD65 1358 aa11.35□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Zfp804bA0A0G2JGH6 1343 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Exoc3l2D3YUP5 789 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ccdc155Q80VJ8 648 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms