RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Ms4a1P19437 291 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Nuf2Q99P69 463 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ophn1Q99J31 802 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Proca1B0QZF7 307 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Bcl2l13P59017 434 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gjb2Q00977 226 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Maco1Q7TQE6 664 aaKnown RBP11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Yeats4Q9CR11 227 aaKnown RBP11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Krt7Q9DCV7 457 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Iqca1lA6H690 825 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Cttnbp2B9EJA2 1648 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Carmil1Q6EDY6 1374 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Cwc27Q3TKY6 469 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Drc1Q3USS3 753 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Speer4bQ9D9F7 267 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ttll5Q8CHB8 1328 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Cog7Q3UM29 770 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Mctp2Q5RJH2 878 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Txndc16Q7TN22 820 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ccdc172Q810N9 267 aa11.85□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Bicd1Q8BR07 835 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Slc8a1P70414 970 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 SlmapQ3URD3 845 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Oas2E9Q9A9 742 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Zfp42P22227 288 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Tbc1d32Q3URV1 1296 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Luc7l2Q7TNC4 392 aaKnown RBP11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gtf3c6Q9D8P7 227 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ccdc121E9Q6D3 323 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Bin1O08539 588 aaKnown RBP11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Diaph2O70566 1098 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ptpdc1Q6NZK8 747 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Stx6Q9JKK1 255 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Trove2O08848 538 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Irx1P81068 480 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Q7TT23 1179 aa11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gigyf1Q99MR1 1044 aaKnown RBP11.84□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Krt90E9Q1Z0 538 aa11.83□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Elp1Q7TT37 1333 aaKnown RBP11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Tnnc1P19123 161 aa11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ccdc91Q9D8L5 442 aa11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ctnna2Q61301 953 aa11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 DesP31001 469 aaKnown RBP11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Krt77Q6IFZ6 572 aa11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Spats2lQ91WJ7 558 aaKnown RBP11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ccdc178Q8CDV0 866 aa11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 IkbkgO88522 412 aa11.83□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Gm6583E9Q8Z1 469 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Psmc4P54775 418 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Gm136Q3V037 328 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ccdc66Q6NS45 935 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Golga1Q9CW79 758 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Lman1Q9D0F3 517 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 ImmtQ8CAQ8 757 aaKnown RBP11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Smc5Q8CG46 1101 aaKnown RBP11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Nfxl1E9Q8I7 918 aaKnown RBP11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Igsf3Q6ZQA6 1194 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Golim4Q8BXA1 655 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 AidaQ8C4Q6 305 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Strn4P58404 760 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Serpinb1cQ5SV42 375 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Taok3Q8BYC6 898 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ccdc150Q8CDI7 1110 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Kdm4aQ8BW72 1064 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Eva1cP58659 440 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Sil1Q9EPK6 465 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Uso1Q9Z1Z0 959 aaKnown RBP11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Tsr2Q8C8T8 191 aa11.82□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Zc4h2Q68FG0 224 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Setdb1O88974 1307 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Cct5P80316 541 aaKnown RBP11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Sf3b2Q3UJB0 878 aaKnown RBP11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Mybpc2Q5XKE0 1136 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Gys2Q8VCB3 704 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Bcl11bQ99PV8 884 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Filip1Q9CS72 1211 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Prr16A3KMN5 304 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Sytl4Q9R0Q1 673 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Wwc1Q5SXA9 1104 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Snx13Q6PHS6 957 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ccdc170D3YXL0 722 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Brf1Q8CFK2 676 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 HscbQ8K3A0 234 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 WrnO09053 1401 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Nlrp4cQ3TKR3 982 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Shq1Q7TMX5 569 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Cep19Q9CQA8 163 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 PalmdQ9JHU2 551 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ano6Q6P9J9 911 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Map3k11Q80XI6 850 aa11.81□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Nek5Q7TSC3 627 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ddx10Q80Y44 875 aaKnown RBP11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Heatr4E9Q357 955 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Dact3Q0PHV7 610 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Srek1ip1Q4V9W2 153 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Pabpn1lQ5XFR0 273 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Cep57Q8CEE0 500 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Rabgap1A2AWA9 1064 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 Ube3aO08759 870 aa11.8□□□□□ -0.52
Col6a3-201ENSMUST00000056925 MpndQ3TV65 487 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms