RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Ubr2Q6WKZ8 1755 aa10.3□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Abcc4E9Q236 1325 aa10.3□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Ripor2Q80U16 1078 aa10.3□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Htatsf1Q8BGC0 757 aa10.3□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Znf526Q8BI66 675 aa10.3□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 ScaperF8VQ70 1398 aaKnown RBP10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Cpa2Q504N0 417 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Fkbp5Q64378 456 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Pdlim2Q8R1G6 349 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 ApobrQ8VBT6 942 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Taf5lQ91WQ5 589 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Kiaa0232Q80U59 1396 aaKnown RBP10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Elp1Q7TT37 1333 aaKnown RBP10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 InsrrQ9WTL4 1300 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Cyb5rlB1AS42 316 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 PrkcshO08795 521 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 AppP12023 770 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 1700010I14RikQ7TPG0 532 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Nol12Q8BG17 217 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Tceanc2Q8R2M0 207 aa10.29□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Ddx60E9PZQ1 1711 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Plekhd1B2RPU2 505 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Mum1Q6DID5 682 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Gimap5Q8BWF2 308 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Dis3l2Q8CI75 870 aaKnown RBP10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 EvcP57680 1005 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Cct4P80315 539 aaKnown RBP10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 BcanQ61361 883 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Eno4Q8C042 619 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Kdm4cQ8VCD7 1054 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Bcl2l12Q9D3J3 255 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Slx4ipQ9D7Y9 413 aa10.28□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Nol8Q3UHX0 1147 aaKnown RBP10.27□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Ankib1Q6ZPS6 1085 aa10.27□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Dmrt2Q8BG36 561 aa10.27□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Rasa1E9PYG6 1038 aa10.27□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Zdhhc9P59268 364 aa10.27□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Vps54Q5SPW0 977 aa10.27□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Flad1Q8R123 492 aa10.27□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Rrs1Q9CYH6 365 aaKnown RBP10.27□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Pus3Q9JI38 481 aa10.27□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 DbnlQ62418 436 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Casq1O09165 405 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Zbtb40Q6PCS8 1258 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Q8C5K5 320 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Psrc1Q9D0P7 329 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 DccP70211 1447 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ms4a2P20490 235 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ercc3P49135 783 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Rsph3aQ3UFY4 516 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Smg7Q5RJH6 1138 aaKnown RBP10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Pdzrn3Q69ZS0 1063 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Slx1bQ8BX32 270 aa10.26□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Eif3aP23116 1344 aaKnown RBP10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Akap11E9Q777 1895 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Anxa1P10107 346 aaKnown RBP10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Mdm2P23804 489 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 HdgfP51859 237 aaKnown RBP10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ltv1Q6NSQ7 470 aaKnown RBP10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ttc19Q8CC21 365 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Pof1bQ8K4L4 587 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Chmp3Q9CQ10 224 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Bag3Q9JLV1 577 aaKnown RBP10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Myd88P22366 296 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Strn4P58404 760 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Timm10P62073 90 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ddx46Q569Z5 1032 aaKnown RBP10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ankle2Q6P1H6 964 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Trim52Q8CDV4 233 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Cdca7lQ922M5 438 aa10.25□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 NpeppsQ11011 920 aa10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 NexnQ7TPW1 607 aa10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Mrps27Q8BK72 415 aaKnown RBP10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Crb1Q8VHS2 1405 aa10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Mcm4P49717 862 aa10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Bag4Q8CI61 457 aa10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 GptQ8QZR5 496 aa10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Rad50P70388 1312 aa10.24□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Tnrc6cQ3UHC0 1690 aaKnown RBP10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ugt1a5B2RT14 529 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Sf3a1Q8K4Z5 791 aaKnown RBP10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Zbtb1Q91VL9 713 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ncoa5Q91W39 579 aaKnown RBP10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 AK157302I3ITR1 129 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Vwa3bJ9JI28 736 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 VgfQ0VGU4 617 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Gm12185Q5NCB2 835 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 PogkQ80TC5 607 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Bsdc1Q80Y55 427 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Top1mtQ8R4U6 593 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Isca1Q9D924 129 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ank1Q02357 1862 aa10.23□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Pkp1P97350 728 aaKnown RBP10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Gjb2Q00977 226 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ddx58Q6Q899 926 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Nip7Q9CXK8 180 aaKnown RBP10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Tiam2Q6ZPF3 1715 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Qtrt2B8ZXI1 415 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Il4rP16382 810 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ppfia3P60469 1194 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms